Sample Configuraton Files

# Sample Configuration Files

This directory contains sample configuration files for GBrowse. To use them, simply copy them into gbrowse.conf, and edit the name of the database, username and password to reflect your database set up:

    db_args       = -adaptor dbi::mysqlopt
    	        -dsn     dbi:mysql:database=fly;host=localhost
                                                ^^^change this
    user          = nobody
                    ^^^^^^ and this
    pass          = secret
                    ^^^^^^ and this

01.yeast.conf
  Saccharomyces cerevisiae from SGD
02.wormbase.conf
  Caenorhabditis elegans from WormBase
03.fly.conf
  Drosophila melanogaster from FlyBase/BDGP
04.human.conf
  Homo sapiens from various sources (download from www.gmod.org)
05.embl.conf
  A proxy that automatically downloads whole accessions from Genbank/EMBL
06.biosql.conf
  Sample configuration file for users of BioSQL
07.chado.conf
  Sample configuration file for users of Chado
08.genbank.conf
  Sample configuration file for data converted from GenBank/EMBL format using the bp_genbank2gff.pl script.

Last modified: Tue Dec 23 17:43:27 EST 2003