Annotated-class         Annotated class
AtomicList-class        Lists of Atomic Vectors in Natural and Rle Form
DataFrame-class         External Data Frame
DataFrameList-class     List of DataFrames
DataTable-API           The DataTable API
DataTable-stats         Statistical modeling with DataTable
FilterRules-class       Collection of Filter Rules
GappedRanges-class      GappedRanges objects
Grouping-class          Grouping objects
Hits-class              Set of hits between 2 vector-like objects
HitsList-class          List of Hits objects
IRanges-class           IRanges and NormalIRanges objects
IRanges-constructor     The IRanges constructor and supporting
                        functions
IRanges-setops          Set operations on IRanges objects
IRanges-utils           IRanges utility functions
IRangesList-class       List of IRanges and NormalIRanges
IntervalTree-class      Interval Search Trees
List-class              List objects
MaskCollection-class    MaskCollection objects
OverlapEncodings-class
                        OverlapEncodings objects
RangedData-class        Data on ranges
RangedData-utils        RangedData utility functions
RangedDataList-class    Lists of RangedData
RangedSelection-class   Selection of ranges and columns
Ranges-class            Ranges objects
Ranges-comparison       Comparing and ordering ranges
Ranges-utils            Ranges utility functions
RangesList-class        List of Ranges
RangesList-utils        RangesList utility functions
RangesMapping-class     Mapping of ranges to another sequence
Rle-class               Rle objects
RleViews-class          The RleViews class
RleViewsList-class      List of RleViews
SimpleList-class        Simple and Compressed List Classes
Vector-class            Vector objects
Views-class             Views objects
Views-utils             Utility functions and numeric summary of Views
                        of numerics
ViewsList-class         List of Views
XDoubleViews-class      The XDoubleViews class
XIntegerViews-class     The XIntegerViews class
XRawList-class          XRawList objects
XVector-class           XVector objects
XVectorList-class       XVectorList objects
compact                 Object compaction
coverage                Coverage across a set of ranges
disjoin                 Making Ranges disjoint
encodeOverlaps          Compute overlap encodings
endoapply               Endomorphisms via application of a function
                        over an object's elements
isConstant              Test if an atomic vector or array is constant
multisplit              Split elements belonging to multiple groups
nearest                 Nearest neighbor finding
rdapply                 Applying over spaces
read.Mask               Read a mask from a file
reverse                 reverse
runstat                 Fixed width running window summaries across
                        vector-like objects
safeExplode             Low-level string utilities
score                   Score accessor and setter
seqapply                Apply function and cast to Vector
updateObject-methods    Update an object of a class defined in IRanges
                        to its current class definition
