## Produce species count table and phenodata

### Description

This tool generates a count table and a phenodata file, which you can use to assign samples to different experimental groups for further statistical analysis. The input for the tool is a read taxonomy assignment file that can be created with the tool Classify sequences to taxonomic units, and a group file.

### Parameters

Cutting level for taxonomic names in count table (0-9) [0]

### Details

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### Output

The analysis output consists of the following:

- counttable.tsv: Count table where rows are samples and columns are taxonomic groups
- phenodata.tsv: Phenodata file allowing the user to assign samples to experimental groups