## Collect multiple metrics from BAM

### Description

Calculates several metrics for alignments in a BAM file.

### Parameters

None

### Details

Calculates several metrics such as base quality, base content and insert size distribution. This tool is based on the Picard CalculateMultipleMetrics tool.

### Output

Output is a pdf file and a tsv file containing the statistics.

### References

This tool is based on the Picard package.