digraph {
graph [overlap=false]
subgraph cluster_Eval_Closure_Sandbox_135 {
	label="Eval::Closure::Sandbox_135";
	"Eval::Closure::Sandbox_135::__ANON__[(eval 160)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_266 {
	label="Eval::Closure::Sandbox_266";
	"Eval::Closure::Sandbox_266::__ANON__[(eval 392)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_210 {
	label="Eval::Closure::Sandbox_210";
	"Eval::Closure::Sandbox_210::__ANON__[(eval 311)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Config {
	label="Config";
	"Config::BEGIN@11";
	"Config::BEGIN@45";
	"Config::TIEHASH";
	"Config::BEGIN@10";
	"Config::BEGIN@9";
	"Config::import";
	"Config::FETCH";
}
subgraph cluster_Eval_Closure_Sandbox_252 {
	label="Eval::Closure::Sandbox_252";
	"Eval::Closure::Sandbox_252::__ANON__[(eval 378)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Moose_Meta_Role_Application_ToRole {
	label="Moose::Meta::Role::Application::ToRole";
	"Moose::Meta::Role::Application::ToRole::meta";
	"Moose::Meta::Role::Application::ToRole::BEGIN@5";
	"Moose::Meta::Role::Application::ToRole::BEGIN@10";
	"Moose::Meta::Role::Application::ToRole::BEGIN@6";
	"Moose::Meta::Role::Application::ToRole::BEGIN@4";
	"Moose::Meta::Role::Application::ToRole::BEGIN@8";
}
subgraph cluster_Bio_Roary_Main_RoaryPostAnalysis {
	label="Bio::Roary::Main::RoaryPostAnalysis";
	"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17";
	"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@14";
	"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@15";
}
subgraph cluster_Eval_Closure_Sandbox_249 {
	label="Eval::Closure::Sandbox_249";
	"Eval::Closure::Sandbox_249::__ANON__[(eval 375)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_285 {
	label="Eval::Closure::Sandbox_285";
	"Eval::Closure::Sandbox_285::__ANON__[(eval 411)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_158 {
	label="Eval::Closure::Sandbox_158";
	"Eval::Closure::Sandbox_158::__ANON__[(eval 189)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Graph_Attribute {
	label="Graph::Attribute";
	"Graph::Attribute::import";
	"Graph::Attribute::__ANON__[Graph/Attribute.pm:15]";
	"Graph::Attribute::get_attribute";
	"Graph::Attribute::__ANON__[Graph/Attribute.pm:19]";
	"Graph::Attribute::BEGIN@14";
	"Graph::Attribute::BEGIN@49";
	"Graph::Attribute::set_attribute";
	"Graph::Attribute::BEGIN@24";
	"Graph::Attribute::BEGIN@3";
	"Graph::Attribute::CORE:match";
}
subgraph cluster_Moose_Meta_Class_Immutable_Trait {
	label="Moose::Meta::Class::Immutable::Trait";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@7";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@4";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@5";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@8";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@10";
	"Moose::Meta::Class::Immutable::Trait::BEGIN@12";
}
subgraph cluster_Eval_Closure_Sandbox_119 {
	label="Eval::Closure::Sandbox_119";
	"Eval::Closure::Sandbox_119::__ANON__[(eval 144)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_297 {
	label="Eval::Closure::Sandbox_297";
	"Eval::Closure::Sandbox_297::__ANON__[(eval 440)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_341 {
	label="Eval::Closure::Sandbox_341";
	"Eval::Closure::Sandbox_341::__ANON__[(eval 484)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_381 {
	label="Eval::Closure::Sandbox_381";
	"Eval::Closure::Sandbox_381::__ANON__[(eval 524)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_2 {
	label="Eval::Closure::Sandbox_2";
	"Eval::Closure::Sandbox_2::__ANON__[(eval 26)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_258 {
	label="Eval::Closure::Sandbox_258";
	"Eval::Closure::Sandbox_258::__ANON__[(eval 384)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_391 {
	label="Eval::Closure::Sandbox_391";
	"Eval::Closure::Sandbox_391::__ANON__[(eval 561)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Annotation_SimpleValue {
	label="Bio::Annotation::SimpleValue";
	"Bio::Annotation::SimpleValue::BEGIN@76";
	"Bio::Annotation::SimpleValue::BEGIN@82";
}
subgraph cluster_Sub_Identify {
	label="Sub::Identify";
	"Sub::Identify::BEGIN@3";
	"Sub::Identify::BEGIN@6";
	"Sub::Identify::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_16 {
	label="Eval::Closure::Sandbox_16";
	"Eval::Closure::Sandbox_16::__ANON__[(eval 40)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_192 {
	label="Eval::Closure::Sandbox_192";
	"Eval::Closure::Sandbox_192::__ANON__[(eval 223)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_198 {
	label="Eval::Closure::Sandbox_198";
	"Eval::Closure::Sandbox_198::__ANON__[(eval 299)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Seq_SeqBuilder {
	label="Bio::Seq::SeqBuilder";
	"Bio::Seq::SeqBuilder::BEGIN@128";
	"Bio::Seq::SeqBuilder::BEGIN@133";
}
subgraph cluster_Eval_Closure_Sandbox_344 {
	label="Eval::Closure::Sandbox_344";
	"Eval::Closure::Sandbox_344::__ANON__[(eval 487)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_105 {
	label="Eval::Closure::Sandbox_105";
	"Eval::Closure::Sandbox_105::__ANON__[(eval 130)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_IdentifiableI {
	label="Bio::IdentifiableI";
	"Bio::IdentifiableI::BEGIN@96";
	"Bio::IdentifiableI::BEGIN@93";
}
subgraph cluster_Class_MOP_Mixin_HasMethods {
	label="Class::MOP::Mixin::HasMethods";
	"Class::MOP::Mixin::HasMethods::_full_method_map";
	"Class::MOP::Mixin::HasMethods::CORE:match";
	"Class::MOP::Mixin::HasMethods::BEGIN@12";
	"Class::MOP::Mixin::HasMethods::_add_meta_method";
	"Class::MOP::Mixin::HasMethods::BEGIN@4";
	"Class::MOP::Mixin::HasMethods::update_package_cache_flag";
	"Class::MOP::Mixin::HasMethods::_get_maybe_raw_method";
	"Class::MOP::Mixin::HasMethods::remove_method";
	"Class::MOP::Mixin::HasMethods::_method_map";
	"Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
	"Class::MOP::Mixin::HasMethods::wrap_method_body";
	"Class::MOP::Mixin::HasMethods::reset_package_cache_flag";
	"Class::MOP::Mixin::HasMethods::BEGIN@7";
	"Class::MOP::Mixin::HasMethods::BEGIN@5";
	"Class::MOP::Mixin::HasMethods::get_method";
	"Class::MOP::Mixin::HasMethods::_get_local_methods";
	"Class::MOP::Mixin::HasMethods::_code_is_mine";
	"Class::MOP::Mixin::HasMethods::has_method";
	"Class::MOP::Mixin::HasMethods::_meta_method_class";
	"Class::MOP::Mixin::HasMethods::BEGIN@9";
	"Class::MOP::Mixin::HasMethods::add_method";
	"Class::MOP::Mixin::HasMethods::method_metaclass";
	"Class::MOP::Mixin::HasMethods::BEGIN@10";
}
subgraph cluster_Eval_Closure_Sandbox_59 {
	label="Eval::Closure::Sandbox_59";
	"Eval::Closure::Sandbox_59::__ANON__[(eval 83)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_30 {
	label="Eval::Closure::Sandbox_30";
	"Eval::Closure::Sandbox_30::__ANON__[(eval 54)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose {
	label="Moose";
	"Moose::BEGIN@26";
	"Moose::init_meta";
	"Moose::BEGIN@34";
	"Moose::BEGIN@1";
	"Moose::BEGIN@37";
	"Moose::has";
	"Moose::before";
	"Moose::BEGIN@11";
	"Moose::BEGIN@27";
	"Moose::BEGIN@43";
	"Moose::BEGIN@32";
	"Moose::BEGIN@40";
	"Moose::BEGIN@9";
	"Moose::unimport";
	"Moose::BEGIN@41";
	"Moose::import";
	"Moose::BEGIN@15";
	"Moose::BEGIN@10";
	"Moose::extends";
	"Moose::BEGIN@12";
	"Moose::BEGIN@7";
	"Moose::BEGIN@36";
	"Moose::BEGIN@28";
	"Moose::BEGIN@17";
	"Moose::BEGIN@14";
	"Moose::with";
	"Moose::BEGIN@19";
	"Moose::BEGIN@38";
	"Moose::BEGIN@24";
	"Moose::BEGIN@30";
	"Moose::BEGIN@35";
	"Moose::bootstrap";
	"Moose::BEGIN@2";
	"Moose::BEGIN@33";
	"Moose::BEGIN@25";
}
subgraph cluster_Eval_Closure_Sandbox_224 {
	label="Eval::Closure::Sandbox_224";
	"Eval::Closure::Sandbox_224::__ANON__[(eval 325)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Package_Stash {
	label="Package::Stash";
	"Package::Stash::BEGIN@10";
	"Package::Stash::BEGIN@15";
	"Package::Stash::BEGIN@35";
	"Package::Stash::BEGIN@17";
	"Package::Stash::BEGIN@8";
	"Package::Stash::BEGIN@9";
	"Package::Stash::BEGIN@2";
}
subgraph cluster_Eval_Closure_Sandbox_35 {
	label="Eval::Closure::Sandbox_35";
	"Eval::Closure::Sandbox_35::__ANON__[(eval 59)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_DB_RandomAccessI {
	label="Bio::DB::RandomAccessI";
	"Bio::DB::RandomAccessI::BEGIN@66";
	"Bio::DB::RandomAccessI::BEGIN@64";
	"Bio::DB::RandomAccessI::BEGIN@68";
}
subgraph cluster_Eval_Closure_Sandbox_45 {
	label="Eval::Closure::Sandbox_45";
	"Eval::Closure::Sandbox_45::__ANON__[(eval 69)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_230 {
	label="Eval::Closure::Sandbox_230";
	"Eval::Closure::Sandbox_230::__ANON__[(eval 347)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_413 {
	label="Eval::Closure::Sandbox_413";
	"Eval::Closure::Sandbox_413::__ANON__[(eval 583)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_274 {
	label="Eval::Closure::Sandbox_274";
	"Eval::Closure::Sandbox_274::__ANON__[(eval 400)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_93 {
	label="Eval::Closure::Sandbox_93";
	"Eval::Closure::Sandbox_93::__ANON__[(eval 118)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_175 {
	label="Eval::Closure::Sandbox_175";
	"Eval::Closure::Sandbox_175::__ANON__[(eval 206)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_mro {
	label="mro";
	"mro::BEGIN@10";
	"mro::get_linear_isa";
	"mro::method_changed_in";
	"mro::get_mro";
	"mro::BEGIN@11";
	"mro::get_pkg_gen";
}
subgraph cluster_Eval_Closure_Sandbox_156 {
	label="Eval::Closure::Sandbox_156";
	"Eval::Closure::Sandbox_156::__ANON__[(eval 187)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_338 {
	label="Eval::Closure::Sandbox_338";
	"Eval::Closure::Sandbox_338::__ANON__[(eval 481)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_RangeI {
	label="Bio::RangeI";
	"Bio::RangeI::BEGIN@98";
	"Bio::RangeI::BEGIN@94";
	"Bio::RangeI::BEGIN@91";
	"Bio::RangeI::BEGIN@96";
	"Bio::RangeI::BEGIN@93";
	"Bio::RangeI::BEGIN@92";
}
subgraph cluster_Eval_Closure_Sandbox_143 {
	label="Eval::Closure::Sandbox_143";
	"Eval::Closure::Sandbox_143::__ANON__[(eval 168)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_40 {
	label="Eval::Closure::Sandbox_40";
	"Eval::Closure::Sandbox_40::__ANON__[(eval 64)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_Roary_CommandLine_Common {
	label="Bio::Roary::CommandLine::Common";
	"Bio::Roary::CommandLine::Common::BEGIN@12";
	"Bio::Roary::CommandLine::Common::BEGIN@13";
	"Bio::Roary::CommandLine::Common::BEGIN@38";
}
subgraph cluster_List_Util {
	label="List::Util";
	"List::Util::import";
	"List::Util::shuffle";
	"List::Util::BEGIN@30";
	"List::Util::first";
	"List::Util::BEGIN@9";
	"List::Util::all";
	"List::Util::any";
}
subgraph cluster_Eval_Closure_Sandbox_71 {
	label="Eval::Closure::Sandbox_71";
	"Eval::Closure::Sandbox_71::__ANON__[(eval 96)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Meta_Instance {
	label="Moose::Meta::Instance";
	"Moose::Meta::Instance::BEGIN@4";
	"Moose::Meta::Instance::BEGIN@7";
	"Moose::Meta::Instance::BEGIN@9";
	"Moose::Meta::Instance::BEGIN@5";
	"Moose::Meta::Instance::_new";
}
subgraph cluster_Opcode {
	label="Opcode";
	"Opcode::BEGIN@15";
	"Opcode::BEGIN@29";
	"Opcode::opset";
	"Opcode::full_opset";
	"Opcode::CORE:subst";
	"Opcode::BEGIN@12";
	"Opcode::BEGIN@13";
	"Opcode::BEGIN@11";
	"Opcode::CORE:match";
	"Opcode::BEGIN@5";
	"Opcode::_init_optags";
	"Opcode::opset_to_ops";
	"Opcode::BEGIN@3";
	"Opcode::CORE:close";
	"Opcode::define_optag";
	"Opcode::CORE:readline";
}
subgraph cluster_Moose_Meta_TypeConstraint_Registry {
	label="Moose::Meta::TypeConstraint::Registry";
	"Moose::Meta::TypeConstraint::Registry::type_constraints";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@4";
	"Moose::Meta::TypeConstraint::Registry::meta";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@12";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@6";
	"Moose::Meta::TypeConstraint::Registry::add_type_constraint";
	"Moose::Meta::TypeConstraint::Registry::get_type_constraint";
	"Moose::Meta::TypeConstraint::Registry::new";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@8";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@10";
	"Moose::Meta::TypeConstraint::Registry::has_type_constraint";
	"Moose::Meta::TypeConstraint::Registry::__ANON__[Moose/Meta/TypeConstraint/Registry.pm:23]";
	"Moose::Meta::TypeConstraint::Registry::BEGIN@5";
}
subgraph cluster_Moose_Meta_Method_Constructor {
	label="Moose::Meta::Method::Constructor";
	"Moose::Meta::Method::Constructor::_initialize_body";
	"Moose::Meta::Method::Constructor::BEGIN@7";
	"Moose::Meta::Method::Constructor::BEGIN@4";
	"Moose::Meta::Method::Constructor::BEGIN@9";
	"Moose::Meta::Method::Constructor::BEGIN@12";
	"Moose::Meta::Method::Constructor::new";
	"Moose::Meta::Method::Constructor::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_7 {
	label="Eval::Closure::Sandbox_7";
	"Eval::Closure::Sandbox_7::__ANON__[(eval 31)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_File_Copy {
	label="File::Copy";
	"File::Copy::BEGIN@10";
	"File::Copy::BEGIN@11";
	"File::Copy::BEGIN@13";
	"File::Copy::BEGIN@47";
	"File::Copy::BEGIN@12";
	"File::Copy::BEGIN@12.1";
	"File::Copy::BEGIN@14";
}
subgraph cluster_Eval_Closure_Sandbox_124 {
	label="Eval::Closure::Sandbox_124";
	"Eval::Closure::Sandbox_124::__ANON__[(eval 149)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_404 {
	label="Eval::Closure::Sandbox_404";
	"Eval::Closure::Sandbox_404::__ANON__[(eval 574)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_re {
	label="re";
	"re::BEGIN@4";
	"re::import";
	"re::BEGIN@5";
	"re::bits";
}
subgraph cluster_Eval_Closure_Sandbox_9 {
	label="Eval::Closure::Sandbox_9";
	"Eval::Closure::Sandbox_9::__ANON__[(eval 33)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_244 {
	label="Eval::Closure::Sandbox_244";
	"Eval::Closure::Sandbox_244::__ANON__[(eval 370)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_67 {
	label="Eval::Closure::Sandbox_67";
	"Eval::Closure::Sandbox_67::__ANON__[(eval 92)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_77 {
	label="Eval::Closure::Sandbox_77";
	"Eval::Closure::Sandbox_77::__ANON__[(eval 102)[Eval/Closure.pm:125]:11]";
}
subgraph cluster_Fcntl {
	label="Fcntl";
	"Fcntl::O_NOFOLLOW";
	"Fcntl::BEGIN@58";
	"Fcntl::O_EXLOCK";
	"Fcntl::O_TEMPORARY";
	"Fcntl::O_LARGEFILE";
	"Fcntl::O_NOINHERIT";
	"Fcntl::O_BINARY";
}
subgraph cluster_Class_MOP_Method_Wrapped {
	label="Class::MOP::Method::Wrapped";
	"Class::MOP::Method::Wrapped::BEGIN@5";
	"Class::MOP::Method::Wrapped::add_around_modifier";
	"Class::MOP::Method::Wrapped::wrap";
	"Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:64]";
	"Class::MOP::Method::Wrapped::BEGIN@7";
	"Class::MOP::Method::Wrapped::BEGIN@9";
	"Class::MOP::Method::Wrapped::BEGIN@4";
	"Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
	"Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:160]";
	"Class::MOP::Method::Wrapped::_new";
	"Class::MOP::Method::Wrapped::add_before_modifier";
}
subgraph cluster_Eval_Closure_Sandbox_226 {
	label="Eval::Closure::Sandbox_226";
	"Eval::Closure::Sandbox_226::__ANON__[(eval 343)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_232 {
	label="Eval::Closure::Sandbox_232";
	"Eval::Closure::Sandbox_232::__ANON__[(eval 349)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_300 {
	label="Eval::Closure::Sandbox_300";
	"Eval::Closure::Sandbox_300::__ANON__[(eval 443)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_303 {
	label="Eval::Closure::Sandbox_303";
	"Eval::Closure::Sandbox_303::__ANON__[(eval 446)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_350 {
	label="Eval::Closure::Sandbox_350";
	"Eval::Closure::Sandbox_350::__ANON__[(eval 493)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_359 {
	label="Eval::Closure::Sandbox_359";
	"Eval::Closure::Sandbox_359::__ANON__[(eval 502)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_204 {
	label="Eval::Closure::Sandbox_204";
	"Eval::Closure::Sandbox_204::__ANON__[(eval 305)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_168 {
	label="Eval::Closure::Sandbox_168";
	"Eval::Closure::Sandbox_168::__ANON__[(eval 199)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_MRO_Compat {
	label="MRO::Compat";
	"MRO::Compat::BEGIN@258";
	"MRO::Compat::BEGIN@118";
	"MRO::Compat::BEGIN@228";
	"MRO::Compat::BEGIN@2";
	"MRO::Compat::BEGIN@39";
	"MRO::Compat::BEGIN@3";
	"MRO::Compat::BEGIN@227";
	"MRO::Compat::BEGIN@10";
}
subgraph cluster_Eval_Closure_Sandbox_237 {
	label="Eval::Closure::Sandbox_237";
	"Eval::Closure::Sandbox_237::__ANON__[(eval 354)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_160 {
	label="Eval::Closure::Sandbox_160";
	"Eval::Closure::Sandbox_160::__ANON__[(eval 191)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_326 {
	label="Eval::Closure::Sandbox_326";
	"Eval::Closure::Sandbox_326::__ANON__[(eval 469)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_53 {
	label="Eval::Closure::Sandbox_53";
	"Eval::Closure::Sandbox_53::__ANON__[(eval 77)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_74 {
	label="Eval::Closure::Sandbox_74";
	"Eval::Closure::Sandbox_74::__ANON__[(eval 99)[Eval/Closure.pm:125]:106]";
}
subgraph cluster_Eval_Closure_Sandbox_115 {
	label="Eval::Closure::Sandbox_115";
	"Eval::Closure::Sandbox_115::__ANON__[(eval 140)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_213 {
	label="Eval::Closure::Sandbox_213";
	"Eval::Closure::Sandbox_213::__ANON__[(eval 314)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Bio_Tools_GFF {
	label="Bio::Tools::GFF";
	"Bio::Tools::GFF::BEGIN@148";
	"Bio::Tools::GFF::BEGIN@150";
	"Bio::Tools::GFF::BEGIN@147";
	"Bio::Tools::GFF::BEGIN@151";
	"Bio::Tools::GFF::BEGIN@152";
	"Bio::Tools::GFF::BEGIN@154";
}
subgraph cluster_Eval_Closure_Sandbox_351 {
	label="Eval::Closure::Sandbox_351";
	"Eval::Closure::Sandbox_351::__ANON__[(eval 494)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_318 {
	label="Eval::Closure::Sandbox_318";
	"Eval::Closure::Sandbox_318::__ANON__[(eval 461)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Clone {
	label="Clone";
	"Clone::BEGIN@5";
	"Clone::BEGIN@4";
	"Clone::bootstrap";
	"Clone::BEGIN@3";
}
subgraph cluster_Graph_TransitiveClosure {
	label="Graph::TransitiveClosure";
	"Graph::TransitiveClosure::BEGIN@3";
	"Graph::TransitiveClosure::BEGIN@9";
	"Graph::TransitiveClosure::BEGIN@10";
}
subgraph cluster_Eval_Closure_Sandbox_83 {
	label="Eval::Closure::Sandbox_83";
	"Eval::Closure::Sandbox_83::__ANON__[(eval 108)[Eval/Closure.pm:125]:40]";
}
subgraph cluster_Eval_Closure_Sandbox_227 {
	label="Eval::Closure::Sandbox_227";
	"Eval::Closure::Sandbox_227::__ANON__[(eval 344)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_430 {
	label="Eval::Closure::Sandbox_430";
	"Eval::Closure::Sandbox_430::__ANON__[(eval 600)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_136 {
	label="Eval::Closure::Sandbox_136";
	"Eval::Closure::Sandbox_136::__ANON__[(eval 161)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_94 {
	label="Eval::Closure::Sandbox_94";
	"Eval::Closure::Sandbox_94::__ANON__[(eval 119)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_320 {
	label="Eval::Closure::Sandbox_320";
	"Eval::Closure::Sandbox_320::__ANON__[(eval 463)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Moose_Meta_TypeConstraint_DuckType {
	label="Moose::Meta::TypeConstraint::DuckType";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@5";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@9";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@4";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@15";
	"Moose::Meta::TypeConstraint::DuckType::meta";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@10";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@8";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@13";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@11";
	"Moose::Meta::TypeConstraint::DuckType::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_309 {
	label="Eval::Closure::Sandbox_309";
	"Eval::Closure::Sandbox_309::CORE:match";
	"Eval::Closure::Sandbox_309::__ANON__[(eval 452)[Eval/Closure.pm:125]:139]";
}
subgraph cluster_Eval_Closure_Sandbox_90 {
	label="Eval::Closure::Sandbox_90";
	"Eval::Closure::Sandbox_90::__ANON__[(eval 115)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_Roary_GroupStatistics {
	label="Bio::Roary::GroupStatistics";
	"Bio::Roary::GroupStatistics::_files_to_groups";
	"Bio::Roary::GroupStatistics::CORE:subst";
	"Bio::Roary::GroupStatistics::BEGIN@23";
	"Bio::Roary::GroupStatistics::DESTROY";
	"Bio::Roary::GroupStatistics::CORE:sort";
	"Bio::Roary::GroupStatistics::create_spreadsheet";
	"Bio::Roary::GroupStatistics::CORE:match";
	"Bio::Roary::GroupStatistics::_row";
	"Bio::Roary::GroupStatistics::annotate_groups_obj";
	"Bio::Roary::GroupStatistics::BEGIN@22";
	"Bio::Roary::GroupStatistics::output_filename";
	"Bio::Roary::GroupStatistics::_text_csv_obj";
	"Bio::Roary::GroupStatistics::_output_fh";
	"Bio::Roary::GroupStatistics::CORE:open";
	"Bio::Roary::GroupStatistics::_sorted_file_names";
	"Bio::Roary::GroupStatistics::CORE:regcomp";
	"Bio::Roary::GroupStatistics::_verbose";
	"Bio::Roary::GroupStatistics::analyse_groups_obj";
	"Bio::Roary::GroupStatistics::_build__sorted_file_names";
	"Bio::Roary::GroupStatistics::BEGIN@20";
	"Bio::Roary::GroupStatistics::BEGIN@21";
	"Bio::Roary::GroupStatistics::BEGIN@202";
	"Bio::Roary::GroupStatistics::_build__files_to_groups";
	"Bio::Roary::GroupStatistics::_build__output_fh";
	"Bio::Roary::GroupStatistics::_groups_to_files";
	"Bio::Roary::GroupStatistics::CORE:close";
	"Bio::Roary::GroupStatistics::_header";
	"Bio::Roary::GroupStatistics::fixed_headers";
	"Bio::Roary::GroupStatistics::meta";
	"Bio::Roary::GroupStatistics::BEGIN@19";
	"Bio::Roary::GroupStatistics::new";
	"Bio::Roary::GroupStatistics::BEGIN@24";
	"Bio::Roary::GroupStatistics::_build__text_csv_obj";
	"Bio::Roary::GroupStatistics::groups_to_contigs";
	"Bio::Roary::GroupStatistics::_build__groups_to_files";
	"Bio::Roary::GroupStatistics::_non_unique_name_for_group";
}
subgraph cluster_Eval_Closure_Sandbox_275 {
	label="Eval::Closure::Sandbox_275";
	"Eval::Closure::Sandbox_275::__ANON__[(eval 401)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Errno {
	label="Errno";
	"Errno::BEGIN@9";
	"Errno::BEGIN@8";
	"Errno::TIEHASH";
	"Errno::BEGIN@21";
}
subgraph cluster_Bio_DescribableI {
	label="Bio::DescribableI";
	"Bio::DescribableI::BEGIN@67";
	"Bio::DescribableI::BEGIN@70";
}
subgraph cluster_base {
	label="base";
	"base::BEGIN@3";
	"base::BEGIN@4";
	"base::has_fields";
	"base::has_attr";
	"base::import";
}
subgraph cluster_Bio_Root_Root {
	label="Bio::Root::Root";
	"Bio::Root::Root::BEGIN@2";
	"Bio::Root::Root::BEGIN@4";
	"Bio::Root::Root::BEGIN@5";
	"Bio::Root::Root::new";
	"Bio::Root::Root::BEGIN@146";
	"Bio::Root::Root::BEGIN@3";
}
subgraph cluster_Eval_Closure {
	label="Eval::Closure";
	"Eval::Closure::BEGIN@3";
	"Eval::Closure::BEGIN@16";
	"Eval::Closure::BEGIN@13";
	"Eval::Closure::BEGIN@6";
	"Eval::Closure::_clean_eval";
	"Eval::Closure::_make_compiler";
	"Eval::Closure::BEGIN@7";
	"Eval::Closure::_make_compiler_source";
	"Eval::Closure::CORE:match";
	"Eval::Closure::_canonicalize_source";
	"Eval::Closure::BEGIN@5";
	"Eval::Closure::_clean_eval_closure";
	"Eval::Closure::BEGIN@2";
	"Eval::Closure::eval_closure";
	"Eval::Closure::BEGIN@1";
	"Eval::Closure::CORE:sort";
	"Eval::Closure::BEGIN@15";
	"Eval::Closure::_validate_env";
	"Eval::Closure::BEGIN@14";
}
subgraph cluster_Devel_StackTrace {
	label="Devel::StackTrace";
	"Devel::StackTrace::BEGIN@10";
	"Devel::StackTrace::BEGIN@8";
	"Devel::StackTrace::BEGIN@15";
	"Devel::StackTrace::BEGIN@12";
	"Devel::StackTrace::BEGIN@11";
	"Devel::StackTrace::BEGIN@7";
	"Devel::StackTrace::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_330 {
	label="Eval::Closure::Sandbox_330";
	"Eval::Closure::Sandbox_330::__ANON__[(eval 473)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_414 {
	label="Eval::Closure::Sandbox_414";
	"Eval::Closure::Sandbox_414::__ANON__[(eval 584)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Class_MOP_Method_Generated {
	label="Class::MOP::Method::Generated";
	"Class::MOP::Method::Generated::BEGIN@9";
	"Class::MOP::Method::Generated::BEGIN@5";
	"Class::MOP::Method::Generated::_generate_description";
	"Class::MOP::Method::Generated::definition_context";
	"Class::MOP::Method::Generated::BEGIN@7";
	"Class::MOP::Method::Generated::_compile_code";
	"Class::MOP::Method::Generated::is_inline";
	"Class::MOP::Method::Generated::BEGIN@4";
}
subgraph cluster_Bio_DB_SeqI {
	label="Bio::DB::SeqI";
	"Bio::DB::SeqI::BEGIN@81";
	"Bio::DB::SeqI::BEGIN@79";
}
subgraph cluster_Eval_Closure_Sandbox_78 {
	label="Eval::Closure::Sandbox_78";
	"Eval::Closure::Sandbox_78::__ANON__[(eval 103)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_428 {
	label="Eval::Closure::Sandbox_428";
	"Eval::Closure::Sandbox_428::__ANON__[(eval 598)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Class_MOP_Instance {
	label="Class::MOP::Instance";
	"Class::MOP::Instance::inline_is_slot_initialized";
	"Class::MOP::Instance::BEGIN@9";
	"Class::MOP::Instance::is_dependent_on_superclasses";
	"Class::MOP::Instance::BEGIN@5";
	"Class::MOP::Instance::_class_name";
	"Class::MOP::Instance::inline_weaken_slot_value";
	"Class::MOP::Instance::is_inlinable";
	"Class::MOP::Instance::new";
	"Class::MOP::Instance::inline_get_slot_value";
	"Class::MOP::Instance::BUILDARGS";
	"Class::MOP::Instance::BEGIN@4";
	"Class::MOP::Instance::set_slot_value";
	"Class::MOP::Instance::_new";
	"Class::MOP::Instance::create_instance";
	"Class::MOP::Instance::get_slot_value";
	"Class::MOP::Instance::inline_set_slot_value";
	"Class::MOP::Instance::is_slot_initialized";
	"Class::MOP::Instance::inline_deinitialize_slot";
	"Class::MOP::Instance::associated_metaclass";
	"Class::MOP::Instance::inline_create_instance";
	"Class::MOP::Instance::BEGIN@7";
	"Class::MOP::Instance::inline_slot_access";
}
subgraph cluster_Eval_Closure_Sandbox_265 {
	label="Eval::Closure::Sandbox_265";
	"Eval::Closure::Sandbox_265::__ANON__[(eval 391)[Eval/Closure.pm:125]:123]";
}
subgraph cluster_Sub_Exporter_Progressive {
	label="Sub::Exporter::Progressive";
	"Sub::Exporter::Progressive::BEGIN@9";
	"Sub::Exporter::Progressive::BEGIN@8";
	"Sub::Exporter::Progressive::BEGIN@23";
	"Sub::Exporter::Progressive::CORE:match";
	"Sub::Exporter::Progressive::sub_export_options";
	"Sub::Exporter::Progressive::import";
	"Sub::Exporter::Progressive::BEGIN@3";
	"Sub::Exporter::Progressive::__ANON__[Sub/Exporter/Progressive.pm:40]";
	"Sub::Exporter::Progressive::BEGIN@4";
	"Sub::Exporter::Progressive::CORE:subst";
	"Sub::Exporter::Progressive::BEGIN@18";
}
subgraph cluster_Bio_Roary_JobRunner_Role {
	label="Bio::Roary::JobRunner::Role";
	"Bio::Roary::JobRunner::Role::BEGIN@12";
}
subgraph cluster_Eval_Closure_Sandbox_358 {
	label="Eval::Closure::Sandbox_358";
	"Eval::Closure::Sandbox_358::__ANON__[(eval 501)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Bio_Location_Fuzzy {
	label="Bio::Location::Fuzzy";
	"Bio::Location::Fuzzy::BEGIN@84";
	"Bio::Location::Fuzzy::BEGIN@82";
}
subgraph cluster_Eval_Closure_Sandbox_170 {
	label="Eval::Closure::Sandbox_170";
	"Eval::Closure::Sandbox_170::__ANON__[(eval 201)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_File_Grep {
	label="File::Grep";
	"File::Grep::BEGIN@5";
	"File::Grep::BEGIN@9";
	"File::Grep::BEGIN@10";
	"File::Grep::CORE:match";
	"File::Grep::BEGIN@6";
	"File::Grep::BEGIN@8";
}
subgraph cluster_Graph_AdjacencyMap_Heavy {
	label="Graph::AdjacencyMap::Heavy";
	"Graph::AdjacencyMap::Heavy::set_path";
	"Graph::AdjacencyMap::Heavy::BEGIN@7";
	"Graph::AdjacencyMap::Heavy::__set_path";
	"Graph::AdjacencyMap::Heavy::__attr";
	"Graph::AdjacencyMap::Heavy::__set_path_node";
	"Graph::AdjacencyMap::Heavy::BEGIN@13";
	"Graph::AdjacencyMap::Heavy::BEGIN@12";
	"Graph::AdjacencyMap::Heavy::CORE:sort";
}
subgraph cluster_Module_Runtime {
	label="Module::Runtime";
	"Module::Runtime::CORE:regcomp";
	"Module::Runtime::import";
	"Module::Runtime::is_module_name";
	"Module::Runtime::require_module";
	"Module::Runtime::use_module";
	"Module::Runtime::check_module_name";
	"Module::Runtime::CORE:match";
	"Module::Runtime::use_package_optimistically";
	"Module::Runtime::CORE:subst";
	"Module::Runtime::BEGIN@116";
	"Module::Runtime::module_notional_filename";
	"Module::Runtime::_is_string";
	"Module::Runtime::BEGIN@120";
	"Module::Runtime::BEGIN@296";
	"Module::Runtime::CORE:qr";
	"Module::Runtime::BEGIN@289";
}
subgraph cluster_Eval_Closure_Sandbox_426 {
	label="Eval::Closure::Sandbox_426";
	"Eval::Closure::Sandbox_426::__ANON__[(eval 596)[Eval/Closure.pm:125]:16]";
	"Eval::Closure::Sandbox_426::CORE:match";
}
subgraph cluster_Error {
	label="Error";
	"Error::import";
	"Error::BEGIN@46";
	"Error::BEGIN@14";
	"Error::BEGIN@15";
	"Error::BEGIN@16";
	"Error::BEGIN@20";
}
subgraph cluster_Eval_Closure_Sandbox_392 {
	label="Eval::Closure::Sandbox_392";
	"Eval::Closure::Sandbox_392::__ANON__[(eval 562)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Roary_GroupLabels {
	label="Bio::Roary::GroupLabels";
	"Bio::Roary::GroupLabels::_group_default_prefix";
	"Bio::Roary::GroupLabels::new";
	"Bio::Roary::GroupLabels::add_labels";
	"Bio::Roary::GroupLabels::CORE:close";
	"Bio::Roary::GroupLabels::output_filename";
	"Bio::Roary::GroupLabels::_build__input_fh";
	"Bio::Roary::GroupLabels::_build__output_fh";
	"Bio::Roary::GroupLabels::meta";
	"Bio::Roary::GroupLabels::_input_fh";
	"Bio::Roary::GroupLabels::CORE:readline";
	"Bio::Roary::GroupLabels::BEGIN@59";
	"Bio::Roary::GroupLabels::BEGIN@19";
	"Bio::Roary::GroupLabels::BEGIN@18";
	"Bio::Roary::GroupLabels::groups_filename";
	"Bio::Roary::GroupLabels::DESTROY";
	"Bio::Roary::GroupLabels::CORE:open";
	"Bio::Roary::GroupLabels::CORE:print";
	"Bio::Roary::GroupLabels::_output_fh";
}
subgraph cluster_Eval_Closure_Sandbox_73 {
	label="Eval::Closure::Sandbox_73";
	"Eval::Closure::Sandbox_73::__ANON__[(eval 98)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Meta_TypeConstraint_Role {
	label="Moose::Meta::TypeConstraint::Role";
	"Moose::Meta::TypeConstraint::Role::BEGIN@5";
	"Moose::Meta::TypeConstraint::Role::BEGIN@12";
	"Moose::Meta::TypeConstraint::Role::BEGIN@8";
	"Moose::Meta::TypeConstraint::Role::_new";
	"Moose::Meta::TypeConstraint::Role::BEGIN@4";
	"Moose::Meta::TypeConstraint::Role::BEGIN@9";
	"Moose::Meta::TypeConstraint::Role::__ANON__[Moose/Meta/TypeConstraint/Role.pm:27]";
	"Moose::Meta::TypeConstraint::Role::BEGIN@10";
	"Moose::Meta::TypeConstraint::Role::meta";
	"Moose::Meta::TypeConstraint::Role::BEGIN@6";
	"Moose::Meta::TypeConstraint::Role::role";
	"Moose::Meta::TypeConstraint::Role::new";
}
subgraph cluster_Bio_FeatureHolderI {
	label="Bio::FeatureHolderI";
	"Bio::FeatureHolderI::BEGIN@96";
	"Bio::FeatureHolderI::BEGIN@95";
	"Bio::FeatureHolderI::BEGIN@98";
}
subgraph cluster_Eval_Closure_Sandbox_157 {
	label="Eval::Closure::Sandbox_157";
	"Eval::Closure::Sandbox_157::__ANON__[(eval 188)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Exporter {
	label="Exporter";
	"Exporter::import";
	"Exporter::as_heavy";
	"Exporter::export";
	"Exporter::CORE:subst";
	"Exporter::export_tags";
	"Exporter::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_48 {
	label="Eval::Closure::Sandbox_48";
	"Eval::Closure::Sandbox_48::__ANON__[(eval 72)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_316 {
	label="Eval::Closure::Sandbox_316";
	"Eval::Closure::Sandbox_316::__ANON__[(eval 459)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_153 {
	label="Eval::Closure::Sandbox_153";
	"Eval::Closure::Sandbox_153::__ANON__[(eval 184)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Roary_Output_NumberOfGroups {
	label="Bio::Roary::Output::NumberOfGroups";
	"Bio::Roary::Output::NumberOfGroups::create_output_files";
	"Bio::Roary::Output::NumberOfGroups::CORE:print";
	"Bio::Roary::Output::NumberOfGroups::_total_genes";
	"Bio::Roary::Output::NumberOfGroups::DESTROY";
	"Bio::Roary::Output::NumberOfGroups::output_raw_filename_new_genes";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@17";
	"Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:31]";
	"Bio::Roary::Output::NumberOfGroups::group_statistics_obj";
	"Bio::Roary::Output::NumberOfGroups::meta";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@116";
	"Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:34]";
	"Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:32]";
	"Bio::Roary::Output::NumberOfGroups::_unique_genes";
	"Bio::Roary::Output::NumberOfGroups::output_raw_filename_total_genes";
	"Bio::Roary::Output::NumberOfGroups::number_of_iterations";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@20";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@18";
	"Bio::Roary::Output::NumberOfGroups::new";
	"Bio::Roary::Output::NumberOfGroups::_conserved_genes";
	"Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion";
	"Bio::Roary::Output::NumberOfGroups::_shuffle_input_files";
	"Bio::Roary::Output::NumberOfGroups::CORE:close";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@19";
	"Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:33]";
	"Bio::Roary::Output::NumberOfGroups::_new_genes";
	"Bio::Roary::Output::NumberOfGroups::output_raw_filename_conserved_genes";
	"Bio::Roary::Output::NumberOfGroups::CORE:open";
	"Bio::Roary::Output::NumberOfGroups::_create_raw_output_file";
	"Bio::Roary::Output::NumberOfGroups::output_raw_filename_unique_genes";
}
subgraph cluster_Eval_Closure_Sandbox_126 {
	label="Eval::Closure::Sandbox_126";
	"Eval::Closure::Sandbox_126::__ANON__[(eval 151)[Eval/Closure.pm:125]:25]";
}
subgraph cluster_AutoLoader {
	label="AutoLoader";
	"AutoLoader::BEGIN@138";
	"AutoLoader::find_filename";
	"AutoLoader::CORE:substcont";
	"AutoLoader::CORE:subst";
	"AutoLoader::BEGIN@186";
	"AutoLoader::AUTOLOAD";
	"AutoLoader::CORE:match";
	"AutoLoader::__ANON__[AutoLoader.pm:31]";
	"AutoLoader::CORE:fteread";
	"AutoLoader::BEGIN@4";
	"AutoLoader::BEGIN@30";
	"AutoLoader::CORE:regcomp";
	"AutoLoader::BEGIN@3";
	"AutoLoader::BEGIN@13";
}
subgraph cluster_Eval_Closure_Sandbox_205 {
	label="Eval::Closure::Sandbox_205";
	"Eval::Closure::Sandbox_205::__ANON__[(eval 306)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_68 {
	label="Eval::Closure::Sandbox_68";
	"Eval::Closure::Sandbox_68::__ANON__[(eval 93)[Eval/Closure.pm:125]:100]";
}
subgraph cluster_Eval_Closure_Sandbox_180 {
	label="Eval::Closure::Sandbox_180";
	"Eval::Closure::Sandbox_180::__ANON__[(eval 211)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_39 {
	label="Eval::Closure::Sandbox_39";
	"Eval::Closure::Sandbox_39::__ANON__[(eval 63)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_49 {
	label="Eval::Closure::Sandbox_49";
	"Eval::Closure::Sandbox_49::__ANON__[(eval 73)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Class_MOP_Overload {
	label="Class::MOP::Overload";
	"Class::MOP::Overload::BEGIN@8";
	"Class::MOP::Overload::BEGIN@5";
	"Class::MOP::Overload::BEGIN@7";
	"Class::MOP::Overload::BEGIN@9";
	"Class::MOP::Overload::BEGIN@4";
	"Class::MOP::Overload::BEGIN@11";
}
subgraph cluster_IO {
	label="IO";
	"IO::BEGIN@7";
	"IO::BEGIN@5";
	"IO::BEGIN@8";
	"IO::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_54 {
	label="Eval::Closure::Sandbox_54";
	"Eval::Closure::Sandbox_54::__ANON__[(eval 78)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Factory_LocationFactoryI {
	label="Bio::Factory::LocationFactoryI";
	"Bio::Factory::LocationFactoryI::BEGIN@94";
	"Bio::Factory::LocationFactoryI::BEGIN@91";
	"Bio::Factory::LocationFactoryI::BEGIN@92";
}
subgraph cluster_Text_Glob {
	label="Text::Glob";
	"Text::Glob::BEGIN@13";
	"Text::Glob::BEGIN@3";
	"Text::Glob::BEGIN@4";
	"Text::Glob::BEGIN@2";
}
subgraph cluster_Getopt_Long {
	label="Getopt::Long";
	"Getopt::Long::FindOption";
	"Getopt::Long::BEGIN@234";
	"Getopt::Long::BEGIN@239";
	"Getopt::Long::BEGIN@46";
	"Getopt::Long::ParseOptionSpec";
	"Getopt::Long::BEGIN@51";
	"Getopt::Long::import";
	"Getopt::Long::BEGIN@247";
	"Getopt::Long::BEGIN@48";
	"Getopt::Long::BEGIN@19";
	"Getopt::Long::BEGIN@248";
	"Getopt::Long::BEGIN@26";
	"Getopt::Long::CORE:match";
	"Getopt::Long::BEGIN@237";
	"Getopt::Long::CORE:regcomp";
	"Getopt::Long::Configure";
	"Getopt::Long::BEGIN@236";
	"Getopt::Long::BEGIN@37";
	"Getopt::Long::BEGIN@258";
	"Getopt::Long::BEGIN@25";
	"Getopt::Long::CORE:sort";
	"Getopt::Long::BEGIN@15";
	"Getopt::Long::BEGIN@233";
	"Getopt::Long::BEGIN@240";
	"Getopt::Long::BEGIN@22";
	"Getopt::Long::GetOptionsFromArray";
	"Getopt::Long::BEGIN@229";
	"Getopt::Long::BEGIN@231";
	"Getopt::Long::ConfigDefaults";
	"Getopt::Long::BEGIN@17";
	"Getopt::Long::BEGIN@219";
	"Getopt::Long::BEGIN@235";
	"Getopt::Long::BEGIN@45";
}
subgraph cluster_Eval_Closure_Sandbox_363 {
	label="Eval::Closure::Sandbox_363";
	"Eval::Closure::Sandbox_363::__ANON__[(eval 506)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_301 {
	label="Eval::Closure::Sandbox_301";
	"Eval::Closure::Sandbox_301::__ANON__[(eval 444)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Roary_PostAnalysis {
	label="Bio::Roary::PostAnalysis";
	"Bio::Roary::PostAnalysis::output_statistics_filename";
	"Bio::Roary::PostAnalysis::input_files";
	"Bio::Roary::PostAnalysis::BEGIN@14";
	"Bio::Roary::PostAnalysis::_number_of_groups_obj";
	"Bio::Roary::PostAnalysis::_build__group_labels_obj";
	"Bio::Roary::PostAnalysis::output_multifasta_files";
	"Bio::Roary::PostAnalysis::_create_embl_files";
	"Bio::Roary::PostAnalysis::DESTROY";
	"Bio::Roary::PostAnalysis::accessory_ordering_key";
	"Bio::Roary::PostAnalysis::BEGIN@20";
	"Bio::Roary::PostAnalysis::BEGIN@16";
	"Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
	"Bio::Roary::PostAnalysis::_annotate_groups_obj";
	"Bio::Roary::PostAnalysis::run";
	"Bio::Roary::PostAnalysis::clusters_filename";
	"Bio::Roary::PostAnalysis::BEGIN@18";
	"Bio::Roary::PostAnalysis::dont_split_groups";
	"Bio::Roary::PostAnalysis::fasta_files";
	"Bio::Roary::PostAnalysis::_input_cd_hit_groups_file";
	"Bio::Roary::PostAnalysis::_group_labels_obj";
	"Bio::Roary::PostAnalysis::BEGIN@19";
	"Bio::Roary::PostAnalysis::_analyse_groups_obj";
	"Bio::Roary::PostAnalysis::dont_create_rplots";
	"Bio::Roary::PostAnalysis::BEGIN@21";
	"Bio::Roary::PostAnalysis::accessory_tab_output_filename";
	"Bio::Roary::PostAnalysis::_output_group_labels_filename";
	"Bio::Roary::PostAnalysis::_order_genes_obj";
	"Bio::Roary::PostAnalysis::_build__split_groups_obj";
	"Bio::Roary::PostAnalysis::new";
	"Bio::Roary::PostAnalysis::_build__annotate_groups_obj";
	"Bio::Roary::PostAnalysis::BEGIN@12";
	"Bio::Roary::PostAnalysis::_build__group_statistics_obj";
	"Bio::Roary::PostAnalysis::_inflate_clusters_obj";
	"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj";
	"Bio::Roary::PostAnalysis::BEGIN@22";
	"Bio::Roary::PostAnalysis::BEGIN@15";
	"Bio::Roary::PostAnalysis::meta";
	"Bio::Roary::PostAnalysis::verbose_stats";
	"Bio::Roary::PostAnalysis::_build__number_of_groups_obj";
	"Bio::Roary::PostAnalysis::core_accessory_tab_output_filename";
	"Bio::Roary::PostAnalysis::_group_statistics_obj";
	"Bio::Roary::PostAnalysis::BEGIN@13";
	"Bio::Roary::PostAnalysis::BEGIN@11";
	"Bio::Roary::PostAnalysis::BEGIN@17";
	"Bio::Roary::PostAnalysis::_build__analyse_groups_obj";
	"Bio::Roary::PostAnalysis::_delete_intermediate_files";
	"Bio::Roary::PostAnalysis::BEGIN@225";
	"Bio::Roary::PostAnalysis::output_filename";
	"Bio::Roary::PostAnalysis::_output_mcl_filename";
	"Bio::Roary::PostAnalysis::core_accessory_ordering_key";
	"Bio::Roary::PostAnalysis::dont_delete_files";
	"Bio::Roary::PostAnalysis::_split_groups_obj";
	"Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
	"Bio::Roary::PostAnalysis::_build__order_genes_obj";
}
subgraph cluster_Eval_Closure_Sandbox_106 {
	label="Eval::Closure::Sandbox_106";
	"Eval::Closure::Sandbox_106::__ANON__[(eval 131)[Eval/Closure.pm:125]:100]";
}
subgraph cluster_Eval_Closure_Sandbox_181 {
	label="Eval::Closure::Sandbox_181";
	"Eval::Closure::Sandbox_181::__ANON__[(eval 212)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_342 {
	label="Eval::Closure::Sandbox_342";
	"Eval::Closure::Sandbox_342::__ANON__[(eval 485)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_File_Spec {
	label="File::Spec";
	"File::Spec::BEGIN@4";
	"File::Spec::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_239 {
	label="Eval::Closure::Sandbox_239";
	"Eval::Closure::Sandbox_239::__ANON__[(eval 356)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_LocatableSeq {
	label="Bio::LocatableSeq";
	"Bio::LocatableSeq::BEGIN@103";
	"Bio::LocatableSeq::BEGIN@105";
	"Bio::LocatableSeq::BEGIN@120";
	"Bio::LocatableSeq::BEGIN@106";
	"Bio::LocatableSeq::BEGIN@107";
}
subgraph cluster_Eval_Closure_Sandbox_407 {
	label="Eval::Closure::Sandbox_407";
	"Eval::Closure::Sandbox_407::__ANON__[(eval 577)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_84 {
	label="Eval::Closure::Sandbox_84";
	"Eval::Closure::Sandbox_84::__ANON__[(eval 109)[Eval/Closure.pm:125]:28]";
}
subgraph cluster_Eval_Closure_Sandbox_23 {
	label="Eval::Closure::Sandbox_23";
	"Eval::Closure::Sandbox_23::__ANON__[(eval 47)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Moose_Meta_Attribute {
	label="Moose::Meta::Attribute";
	"Moose::Meta::Attribute::BEGIN@6";
	"Moose::Meta::Attribute::_eval_environment";
	"Moose::Meta::Attribute::_inline_throw_exception";
	"Moose::Meta::Attribute::_inline_generate_default";
	"Moose::Meta::Attribute::BEGIN@21";
	"Moose::Meta::Attribute::BEGIN@13";
	"Moose::Meta::Attribute::_process_options";
	"Moose::Meta::Attribute::_inline_return_auto_deref";
	"Moose::Meta::Attribute::_process_lazy_option";
	"Moose::Meta::Attribute::CORE:match";
	"Moose::Meta::Attribute::BEGIN@9";
	"Moose::Meta::Attribute::BEGIN@15";
	"Moose::Meta::Attribute::BEGIN@16";
	"Moose::Meta::Attribute::interpolate_class";
	"Moose::Meta::Attribute::BEGIN@19";
	"Moose::Meta::Attribute::_inline_check_lazy";
	"Moose::Meta::Attribute::BEGIN@10";
	"Moose::Meta::Attribute::_process_required_option";
	"Moose::Meta::Attribute::_check_associated_methods";
	"Moose::Meta::Attribute::_process_does_option";
	"Moose::Meta::Attribute::_writer_value_needs_copy";
	"Moose::Meta::Attribute::_inline_set_value";
	"Moose::Meta::Attribute::_inline_weaken_value";
	"Moose::Meta::Attribute::BEGIN@7";
	"Moose::Meta::Attribute::_process_coerce_option";
	"Moose::Meta::Attribute::new";
	"Moose::Meta::Attribute::_process_accessors";
	"Moose::Meta::Attribute::remove_accessors";
	"Moose::Meta::Attribute::_inline_get_old_value_for_trigger";
	"Moose::Meta::Attribute::_inline_init_from_default";
	"Moose::Meta::Attribute::CORE:sort";
	"Moose::Meta::Attribute::_inline_trigger";
	"Moose::Meta::Attribute::BEGIN@8";
	"Moose::Meta::Attribute::_process_trigger_option";
	"Moose::Meta::Attribute::_process_lazy_build_option";
	"Moose::Meta::Attribute::install_accessors";
	"Moose::Meta::Attribute::_inline_get_value";
	"Moose::Meta::Attribute::accessor_metaclass";
	"Moose::Meta::Attribute::_process_is_option";
	"Moose::Meta::Attribute::BEGIN@14";
	"Moose::Meta::Attribute::_inline_check_constraint";
	"Moose::Meta::Attribute::BEGIN@12";
	"Moose::Meta::Attribute::_inline_check_coercion";
	"Moose::Meta::Attribute::_inline_init_slot";
	"Moose::Meta::Attribute::_new";
	"Moose::Meta::Attribute::_process_isa_option";
	"Moose::Meta::Attribute::BEGIN@17";
	"Moose::Meta::Attribute::interpolate_class_and_new";
	"Moose::Meta::Attribute::_auto_deref";
	"Moose::Meta::Attribute::_process_auto_deref_option";
	"Moose::Meta::Attribute::_inline_tc_code";
	"Moose::Meta::Attribute::_inline_check_required";
}
subgraph cluster_Eval_Closure_Sandbox_176 {
	label="Eval::Closure::Sandbox_176";
	"Eval::Closure::Sandbox_176::__ANON__[(eval 207)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Eval_Closure_Sandbox_177 {
	label="Eval::Closure::Sandbox_177";
	"Eval::Closure::Sandbox_177::__ANON__[(eval 208)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_433 {
	label="Eval::Closure::Sandbox_433";
	"Eval::Closure::Sandbox_433::CORE:match";
	"Eval::Closure::Sandbox_433::__ANON__[(eval 603)[Eval/Closure.pm:125]:21]";
}
subgraph cluster_Eval_Closure_Sandbox_8 {
	label="Eval::Closure::Sandbox_8";
	"Eval::Closure::Sandbox_8::__ANON__[(eval 32)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Deprecated {
	label="Moose::Deprecated";
	"Moose::Deprecated::BEGIN@5";
	"Moose::Deprecated::BEGIN@7";
	"Moose::Deprecated::CORE:qr";
	"Moose::Deprecated::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_296 {
	label="Eval::Closure::Sandbox_296";
	"Eval::Closure::Sandbox_296::__ANON__[(eval 422)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_104 {
	label="Eval::Closure::Sandbox_104";
	"Eval::Closure::Sandbox_104::__ANON__[(eval 129)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_144 {
	label="Eval::Closure::Sandbox_144";
	"Eval::Closure::Sandbox_144::__ANON__[(eval 169)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_253 {
	label="Eval::Closure::Sandbox_253";
	"Eval::Closure::Sandbox_253::__ANON__[(eval 379)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_272 {
	label="Eval::Closure::Sandbox_272";
	"Eval::Closure::Sandbox_272::__ANON__[(eval 398)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_50 {
	label="Eval::Closure::Sandbox_50";
	"Eval::Closure::Sandbox_50::__ANON__[(eval 74)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_123 {
	label="Eval::Closure::Sandbox_123";
	"Eval::Closure::Sandbox_123::__ANON__[(eval 148)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_DB_InMemoryCache {
	label="Bio::DB::InMemoryCache";
	"Bio::DB::InMemoryCache::BEGIN@77";
	"Bio::DB::InMemoryCache::BEGIN@73";
	"Bio::DB::InMemoryCache::BEGIN@75";
}
subgraph cluster_Eval_Closure_Sandbox_367 {
	label="Eval::Closure::Sandbox_367";
	"Eval::Closure::Sandbox_367::__ANON__[(eval 510)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_247 {
	label="Eval::Closure::Sandbox_247";
	"Eval::Closure::Sandbox_247::__ANON__[(eval 373)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Graph_AdjacencyMatrix {
	label="Graph::AdjacencyMatrix";
	"Graph::AdjacencyMatrix::BEGIN@8";
	"Graph::AdjacencyMatrix::BEGIN@6";
	"Graph::AdjacencyMatrix::BEGIN@3";
	"Graph::AdjacencyMatrix::BEGIN@10";
	"Graph::AdjacencyMatrix::BEGIN@5";
}
subgraph cluster_Bio_Roary_ParseGFFAnnotationRole {
	label="Bio::Roary::ParseGFFAnnotationRole";
	"Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string";
	"Bio::Roary::ParseGFFAnnotationRole::_build__awk_filter";
	"Bio::Roary::ParseGFFAnnotationRole::BEGIN@10";
	"Bio::Roary::ParseGFFAnnotationRole::BEGIN@11";
}
subgraph cluster_Eval_Closure_Sandbox_107 {
	label="Eval::Closure::Sandbox_107";
	"Eval::Closure::Sandbox_107::__ANON__[(eval 132)[Eval/Closure.pm:125]:28]";
}
subgraph cluster_Eval_Closure_Sandbox_336 {
	label="Eval::Closure::Sandbox_336";
	"Eval::Closure::Sandbox_336::__ANON__[(eval 479)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_393 {
	label="Eval::Closure::Sandbox_393";
	"Eval::Closure::Sandbox_393::__ANON__[(eval 563)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_SeqFeature_Generic {
	label="Bio::SeqFeature::Generic";
	"Bio::SeqFeature::Generic::BEGIN@151";
	"Bio::SeqFeature::Generic::BEGIN@146";
	"Bio::SeqFeature::Generic::BEGIN@145";
	"Bio::SeqFeature::Generic::BEGIN@143";
	"Bio::SeqFeature::Generic::BEGIN@148";
	"Bio::SeqFeature::Generic::BEGIN@147";
}
subgraph cluster_Moose_Meta_Role_Composite {
	label="Moose::Meta::Role::Composite";
	"Moose::Meta::Role::Composite::BEGIN@10";
	"Moose::Meta::Role::Composite::BEGIN@9";
	"Moose::Meta::Role::Composite::meta";
	"Moose::Meta::Role::Composite::BEGIN@6";
	"Moose::Meta::Role::Composite::BEGIN@4";
	"Moose::Meta::Role::Composite::BEGIN@8";
	"Moose::Meta::Role::Composite::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_137 {
	label="Eval::Closure::Sandbox_137";
	"Eval::Closure::Sandbox_137::__ANON__[(eval 162)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_219 {
	label="Eval::Closure::Sandbox_219";
	"Eval::Closure::Sandbox_219::__ANON__[(eval 320)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_89 {
	label="Eval::Closure::Sandbox_89";
	"Eval::Closure::Sandbox_89::__ANON__[(eval 114)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_DynaLoader {
	label="DynaLoader";
	"DynaLoader::CORE:ftfile";
	"DynaLoader::CORE:ftsize";
	"DynaLoader::dl_undef_symbols";
	"DynaLoader::CORE:regcomp";
	"DynaLoader::BEGIN@22";
	"DynaLoader::dl_find_symbol";
	"DynaLoader::dl_load_file";
	"DynaLoader::CORE:subst";
	"DynaLoader::BEGIN@18";
	"DynaLoader::dl_load_flags";
	"DynaLoader::dl_install_xsub";
	"DynaLoader::CORE:ftdir";
	"DynaLoader::bootstrap";
}
subgraph cluster_Moose_Meta_Method_Overridden {
	label="Moose::Meta::Method::Overridden";
	"Moose::Meta::Method::Overridden::BEGIN@5";
	"Moose::Meta::Method::Overridden::BEGIN@7";
	"Moose::Meta::Method::Overridden::BEGIN@4";
	"Moose::Meta::Method::Overridden::BEGIN@9";
}
subgraph cluster_Eval_Closure_Sandbox_259 {
	label="Eval::Closure::Sandbox_259";
	"Eval::Closure::Sandbox_259::__ANON__[(eval 385)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_268 {
	label="Eval::Closure::Sandbox_268";
	"Eval::Closure::Sandbox_268::__ANON__[(eval 394)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Class_MOP_Module {
	label="Class::MOP::Module";
	"Class::MOP::Module::_instantiate_module";
	"Class::MOP::Module::BEGIN@7";
	"Class::MOP::Module::BEGIN@4";
	"Class::MOP::Module::BEGIN@5";
	"Class::MOP::Module::create";
}
subgraph cluster_Moose_Meta_Attribute_Native {
	label="Moose::Meta::Attribute::Native";
	"Moose::Meta::Attribute::Native::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_187 {
	label="Eval::Closure::Sandbox_187";
	"Eval::Closure::Sandbox_187::__ANON__[(eval 218)[Eval/Closure.pm:125]:85]";
}
subgraph cluster_Eval_Closure_Sandbox_169 {
	label="Eval::Closure::Sandbox_169";
	"Eval::Closure::Sandbox_169::__ANON__[(eval 200)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_321 {
	label="Eval::Closure::Sandbox_321";
	"Eval::Closure::Sandbox_321::__ANON__[(eval 464)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Data_OptList {
	label="Data::OptList";
	"Data::OptList::__ANON__[Data/OptList.pm:54]";
	"Data::OptList::BEGIN@100";
	"Data::OptList::mkopt_hash";
	"Data::OptList::mkopt";
	"Data::OptList::BEGIN@4";
	"Data::OptList::BEGIN@15";
	"Data::OptList::BEGIN@10";
	"Data::OptList::BEGIN@11";
	"Data::OptList::BEGIN@9";
	"Data::OptList::__is_a";
}
subgraph cluster_Eval_Closure_Sandbox_14 {
	label="Eval::Closure::Sandbox_14";
	"Eval::Closure::Sandbox_14::__ANON__[(eval 38)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_332 {
	label="Eval::Closure::Sandbox_332";
	"Eval::Closure::Sandbox_332::__ANON__[(eval 475)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Moose_Meta_TypeConstraint_Enum {
	label="Moose::Meta::TypeConstraint::Enum";
	"Moose::Meta::TypeConstraint::Enum::meta";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@9";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@5";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@4";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@13";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@8";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@6";
	"Moose::Meta::TypeConstraint::Enum::BEGIN@11";
}
subgraph cluster_Eval_Closure_Sandbox_242 {
	label="Eval::Closure::Sandbox_242";
	"Eval::Closure::Sandbox_242::__ANON__[(eval 359)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_43 {
	label="Eval::Closure::Sandbox_43";
	"Eval::Closure::Sandbox_43::__ANON__[(eval 67)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_329 {
	label="Eval::Closure::Sandbox_329";
	"Eval::Closure::Sandbox_329::__ANON__[(eval 472)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Try_Tiny_ScopeGuard {
	label="Try::Tiny::ScopeGuard";
	"Try::Tiny::ScopeGuard::BEGIN@144";
}
subgraph cluster_Eval_Closure_Sandbox_421 {
	label="Eval::Closure::Sandbox_421";
	"Eval::Closure::Sandbox_421::__ANON__[(eval 591)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_10 {
	label="Eval::Closure::Sandbox_10";
	"Eval::Closure::Sandbox_10::__ANON__[(eval 34)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_Location_FuzzyLocationI {
	label="Bio::Location::FuzzyLocationI";
	"Bio::Location::FuzzyLocationI::BEGIN@78";
	"Bio::Location::FuzzyLocationI::BEGIN@76";
}
subgraph cluster_Params_Util {
	label="Params::Util";
	"Params::Util::bootstrap";
	"Params::Util::_ARRAYLIKE";
	"Params::Util::BEGIN@65";
	"Params::Util::BEGIN@58";
	"Params::Util::_CODELIKE";
	"Params::Util::_SCALAR0";
	"Params::Util::_HASH0";
	"Params::Util::_HASHLIKE";
	"Params::Util::BEGIN@59";
}
subgraph cluster_Bio_Annotation_TypeManager {
	label="Bio::Annotation::TypeManager";
	"Bio::Annotation::TypeManager::BEGIN@80";
	"Bio::Annotation::TypeManager::BEGIN@86";
}
subgraph cluster_Eval_Closure_Sandbox_207 {
	label="Eval::Closure::Sandbox_207";
	"Eval::Closure::Sandbox_207::__ANON__[(eval 308)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Bio_Roary_ContigsToGeneIDsFromGFF {
	label="Bio::Roary::ContigsToGeneIDsFromGFF";
	"Bio::Roary::ContigsToGeneIDsFromGFF::meta";
	"Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::new";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_awk_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:close";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:readline";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_min_nucleotide_overlap_percentage";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_tags_to_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::DESTROY";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::gff_file";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@18";
	"Bio::Roary::ContigsToGeneIDsFromGFF::overlapping_hypothetical_protein_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_percent_overlap";
	"Bio::Roary::ContigsToGeneIDsFromGFF::__ANON__[lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm:24]";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:open";
}
subgraph cluster_Bio_PrimarySeq {
	label="Bio::PrimarySeq";
	"Bio::PrimarySeq::BEGIN@133";
	"Bio::PrimarySeq::BEGIN@128";
}
subgraph cluster_Eval_Closure_Sandbox_250 {
	label="Eval::Closure::Sandbox_250";
	"Eval::Closure::Sandbox_250::__ANON__[(eval 376)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_200 {
	label="Eval::Closure::Sandbox_200";
	"Eval::Closure::Sandbox_200::__ANON__[(eval 301)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_95 {
	label="Eval::Closure::Sandbox_95";
	"Eval::Closure::Sandbox_95::__ANON__[(eval 120)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_174 {
	label="Eval::Closure::Sandbox_174";
	"Eval::Closure::Sandbox_174::__ANON__[(eval 205)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Moose_Util_TypeConstraints_Builtins {
	label="Moose::Util::TypeConstraints::Builtins";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:33]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:170]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:284]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:40]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:52]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:114]";
	"Moose::Util::TypeConstraints::Builtins::BEGIN@7";
	"Moose::Util::TypeConstraints::Builtins::where";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:189]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:77]";
	"Moose::Util::TypeConstraints::Builtins::BEGIN@8";
	"Moose::Util::TypeConstraints::Builtins::inline_as";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:60]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:22]";
	"Moose::Util::TypeConstraints::Builtins::type";
	"Moose::Util::TypeConstraints::Builtins::BEGIN@4";
	"Moose::Util::TypeConstraints::Builtins::BEGIN@9";
	"Moose::Util::TypeConstraints::Builtins::define_builtins";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:285]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:157]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:252]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:151]";
	"Moose::Util::TypeConstraints::Builtins::subtype";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:217]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:66]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:106]";
	"Moose::Util::TypeConstraints::Builtins::BEGIN@5";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:131]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:146]";
	"Moose::Util::TypeConstraints::Builtins::as";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:126]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:292]";
	"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:119]";
}
subgraph cluster_Eval_Closure_Sandbox_411 {
	label="Eval::Closure::Sandbox_411";
	"Eval::Closure::Sandbox_411::__ANON__[(eval 581)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Util_MetaRole {
	label="Moose::Util::MetaRole";
	"Moose::Util::MetaRole::BEGIN@10";
	"Moose::Util::MetaRole::BEGIN@8";
	"Moose::Util::MetaRole::BEGIN@5";
	"Moose::Util::MetaRole::BEGIN@6";
	"Moose::Util::MetaRole::BEGIN@9";
	"Moose::Util::MetaRole::BEGIN@4";
}
subgraph cluster_Moose_Meta_TypeConstraint_Parameterized {
	label="Moose::Meta::TypeConstraint::Parameterized";
	"Moose::Meta::TypeConstraint::Parameterized::_new";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10";
	"Moose::Meta::TypeConstraint::Parameterized::has_type_parameter";
	"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined";
	"Moose::Meta::TypeConstraint::Parameterized::parameterized_from";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@6";
	"Moose::Meta::TypeConstraint::Parameterized::type_parameter";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@8";
	"Moose::Meta::TypeConstraint::Parameterized::meta";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@5";
	"Moose::Meta::TypeConstraint::Parameterized::_inline_check";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@13";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@9";
	"Moose::Meta::TypeConstraint::Parameterized::inline_environment";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@4";
	"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint";
	"Moose::Meta::TypeConstraint::Parameterized::has_parameterized_from";
	"Moose::Meta::TypeConstraint::Parameterized::BEGIN@11";
}
subgraph cluster_Eval_Closure_Sandbox_32 {
	label="Eval::Closure::Sandbox_32";
	"Eval::Closure::Sandbox_32::__ANON__[(eval 56)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_154 {
	label="Eval::Closure::Sandbox_154";
	"Eval::Closure::Sandbox_154::__ANON__[(eval 185)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_353 {
	label="Eval::Closure::Sandbox_353";
	"Eval::Closure::Sandbox_353::__ANON__[(eval 496)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Meta_Role_Application_RoleSummation {
	label="Moose::Meta::Role::Application::RoleSummation";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@4";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@11";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@5";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@8";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@13";
	"Moose::Meta::Role::Application::RoleSummation::meta";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@9";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@15";
	"Moose::Meta::Role::Application::RoleSummation::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_314 {
	label="Eval::Closure::Sandbox_314";
	"Eval::Closure::Sandbox_314::__ANON__[(eval 457)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_163 {
	label="Eval::Closure::Sandbox_163";
	"Eval::Closure::Sandbox_163::__ANON__[(eval 194)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Bio_Location_CoordinatePolicyI {
	label="Bio::Location::CoordinatePolicyI";
	"Bio::Location::CoordinatePolicyI::BEGIN@86";
	"Bio::Location::CoordinatePolicyI::BEGIN@84";
}
subgraph cluster_subs {
	label="subs";
	"subs::import";
}
subgraph cluster_Eval_Closure_Sandbox_406 {
	label="Eval::Closure::Sandbox_406";
	"Eval::Closure::Sandbox_406::__ANON__[(eval 576)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Module_Implementation {
	label="Module::Implementation";
	"Module::Implementation::BEGIN@113";
	"Module::Implementation::build_loader_sub";
	"Module::Implementation::BEGIN@7";
	"Module::Implementation::BEGIN@9";
	"Module::Implementation::CORE:subst";
	"Module::Implementation::try {...} ";
	"Module::Implementation::__ANON__[Module/Implementation.pm:44]";
	"Module::Implementation::BEGIN@114";
	"Module::Implementation::_build_loader";
	"Module::Implementation::BEGIN@6";
	"Module::Implementation::_load_implementation";
	"Module::Implementation::implementation_for";
	"Module::Implementation::BEGIN@10";
	"Module::Implementation::_copy_symbols";
}
subgraph cluster_Eval_Closure_Sandbox_257 {
	label="Eval::Closure::Sandbox_257";
	"Eval::Closure::Sandbox_257::__ANON__[(eval 383)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_151 {
	label="Eval::Closure::Sandbox_151";
	"Eval::Closure::Sandbox_151::__ANON__[(eval 177)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_165 {
	label="Eval::Closure::Sandbox_165";
	"Eval::Closure::Sandbox_165::__ANON__[(eval 196)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_85 {
	label="Eval::Closure::Sandbox_85";
	"Eval::Closure::Sandbox_85::__ANON__[(eval 110)[Eval/Closure.pm:125]:28]";
}
subgraph cluster_Eval_Closure_Sandbox_349 {
	label="Eval::Closure::Sandbox_349";
	"Eval::Closure::Sandbox_349::__ANON__[(eval 492)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Moose_Meta_Mixin_AttributeCore {
	label="Moose::Meta::Mixin::AttributeCore";
	"Moose::Meta::Mixin::AttributeCore::has_trigger";
	"Moose::Meta::Mixin::AttributeCore::BEGIN@7";
	"Moose::Meta::Mixin::AttributeCore::should_auto_deref";
	"Moose::Meta::Mixin::AttributeCore::type_constraint";
	"Moose::Meta::Mixin::AttributeCore::BEGIN@5";
	"Moose::Meta::Mixin::AttributeCore::is_required";
	"Moose::Meta::Mixin::AttributeCore::should_coerce";
	"Moose::Meta::Mixin::AttributeCore::is_lazy";
	"Moose::Meta::Mixin::AttributeCore::has_handles";
	"Moose::Meta::Mixin::AttributeCore::BEGIN@4";
	"Moose::Meta::Mixin::AttributeCore::is_weak_ref";
	"Moose::Meta::Mixin::AttributeCore::has_type_constraint";
}
subgraph cluster_Eval_Closure_Sandbox_431 {
	label="Eval::Closure::Sandbox_431";
	"Eval::Closure::Sandbox_431::__ANON__[(eval 601)[Eval/Closure.pm:125]:16]";
	"Eval::Closure::Sandbox_431::CORE:match";
}
subgraph cluster_Sub_Name {
	label="Sub::Name";
	"Sub::Name::BEGIN@45";
	"Sub::Name::subname";
	"Sub::Name::BEGIN@44";
	"Sub::Name::BEGIN@42";
	"Sub::Name::BEGIN@49";
	"Sub::Name::BEGIN@50";
	"Sub::Name::bootstrap";
}
subgraph cluster_Eval_Closure_Sandbox_189 {
	label="Eval::Closure::Sandbox_189";
	"Eval::Closure::Sandbox_189::__ANON__[(eval 220)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Graph_Matrix {
	label="Graph::Matrix";
	"Graph::Matrix::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_51 {
	label="Eval::Closure::Sandbox_51";
	"Eval::Closure::Sandbox_51::__ANON__[(eval 75)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_121 {
	label="Eval::Closure::Sandbox_121";
	"Eval::Closure::Sandbox_121::__ANON__[(eval 146)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_79 {
	label="Eval::Closure::Sandbox_79";
	"Eval::Closure::Sandbox_79::__ANON__[(eval 104)[Eval/Closure.pm:125]:27]";
}
subgraph cluster_Eval_Closure_Sandbox_56 {
	label="Eval::Closure::Sandbox_56";
	"Eval::Closure::Sandbox_56::__ANON__[(eval 80)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_22 {
	label="Eval::Closure::Sandbox_22";
	"Eval::Closure::Sandbox_22::__ANON__[(eval 46)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Scalar_Util {
	label="Scalar::Util";
	"Scalar::Util::BEGIN@9";
	"Scalar::Util::refaddr";
	"Scalar::Util::isweak";
	"Scalar::Util::reftype";
	"Scalar::Util::blessed";
	"Scalar::Util::weaken";
}
subgraph cluster_Eval_Closure_Sandbox_211 {
	label="Eval::Closure::Sandbox_211";
	"Eval::Closure::Sandbox_211::__ANON__[(eval 312)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_305 {
	label="Eval::Closure::Sandbox_305";
	"Eval::Closure::Sandbox_305::__ANON__[(eval 448)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_FindBin {
	label="FindBin";
	"FindBin::CORE:ftfile";
	"FindBin::BEGIN@83";
	"FindBin::CORE:readlink";
	"FindBin::init";
	"FindBin::BEGIN@80";
	"FindBin::BEGIN@85";
	"FindBin::BEGIN@84";
	"FindBin::BEGIN@166";
	"FindBin::cwd2";
}
subgraph cluster_Eval_Closure_Sandbox_69 {
	label="Eval::Closure::Sandbox_69";
	"Eval::Closure::Sandbox_69::__ANON__[(eval 94)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_38 {
	label="Eval::Closure::Sandbox_38";
	"Eval::Closure::Sandbox_38::__ANON__[(eval 62)[Eval/Closure.pm:125]:52]";
}
subgraph cluster_Eval_Closure_Sandbox_260 {
	label="Eval::Closure::Sandbox_260";
	"Eval::Closure::Sandbox_260::__ANON__[(eval 386)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Bio_Roary_SplitGroups {
	label="Bio::Roary::SplitGroups";
	"Bio::Roary::SplitGroups::CORE:open";
	"Bio::Roary::SplitGroups::max_recursion";
	"Bio::Roary::SplitGroups::fasta_files";
	"Bio::Roary::SplitGroups::_closest_cgn";
	"Bio::Roary::SplitGroups::BEGIN@318";
	"Bio::Roary::SplitGroups::BEGIN@14";
	"Bio::Roary::SplitGroups::_genes_to_files";
	"Bio::Roary::SplitGroups::__ANON__[lib/Bio/Roary/SplitGroups.pm:38]";
	"Bio::Roary::SplitGroups::meta";
	"Bio::Roary::SplitGroups::_parse_gene_neighbourhood";
	"Bio::Roary::SplitGroups::CORE:qr";
	"Bio::Roary::SplitGroups::CORE:ftis";
	"Bio::Roary::SplitGroups::_pre_filter_fasta_files";
	"Bio::Roary::SplitGroups::_update_genes_to_groups";
	"Bio::Roary::SplitGroups::CORE:system";
	"Bio::Roary::SplitGroups::_make_tmp_dir";
	"Bio::Roary::SplitGroups::_gene_files_temp_dir_obj";
	"Bio::Roary::SplitGroups::BEGIN@12";
	"Bio::Roary::SplitGroups::_find_paralogs";
	"Bio::Roary::SplitGroups::_same_group";
	"Bio::Roary::SplitGroups::outfile";
	"Bio::Roary::SplitGroups::_build__analyse_groups_obj";
	"Bio::Roary::SplitGroups::_do_sorting";
	"Bio::Roary::SplitGroups::_neighbourhood_size";
	"Bio::Roary::SplitGroups::CORE:readline";
	"Bio::Roary::SplitGroups::BEGIN@17";
	"Bio::Roary::SplitGroups::_set_genes_to_groups";
	"Bio::Roary::SplitGroups::CORE:print";
	"Bio::Roary::SplitGroups::_analyse_groups_obj";
	"Bio::Roary::SplitGroups::_genes_to_groups";
	"Bio::Roary::SplitGroups::BEGIN@11";
	"Bio::Roary::SplitGroups::BEGIN@15";
	"Bio::Roary::SplitGroups::CORE:subst";
	"Bio::Roary::SplitGroups::BEGIN@16";
	"Bio::Roary::SplitGroups::split_groups";
	"Bio::Roary::SplitGroups::new";
	"Bio::Roary::SplitGroups::groupfile";
	"Bio::Roary::SplitGroups::DESTROY";
	"Bio::Roary::SplitGroups::BEGIN@13";
	"Bio::Roary::SplitGroups::_tmp_dir";
	"Bio::Roary::SplitGroups::_build__genes_to_files";
	"Bio::Roary::SplitGroups::_true_orthologs";
	"Bio::Roary::SplitGroups::CORE:close";
	"Bio::Roary::SplitGroups::_shared_cgn_score";
	"Bio::Roary::SplitGroups::_contains_paralogs";
}
subgraph cluster_Eval_Closure_Sandbox_418 {
	label="Eval::Closure::Sandbox_418";
	"Eval::Closure::Sandbox_418::__ANON__[(eval 588)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Eval_Closure_Sandbox_377 {
	label="Eval::Closure::Sandbox_377";
	"Eval::Closure::Sandbox_377::__ANON__[(eval 520)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Bio_Annotation_Collection {
	label="Bio::Annotation::Collection";
	"Bio::Annotation::Collection::BEGIN@92";
	"Bio::Annotation::Collection::BEGIN@93";
	"Bio::Annotation::Collection::BEGIN@96";
	"Bio::Annotation::Collection::BEGIN@88";
}
subgraph cluster_Eval_Closure_Sandbox_91 {
	label="Eval::Closure::Sandbox_91";
	"Eval::Closure::Sandbox_91::__ANON__[(eval 116)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_Roary_InflateClusters {
	label="Bio::Roary::InflateClusters";
	"Bio::Roary::InflateClusters::inflate";
	"Bio::Roary::InflateClusters::CORE:close";
	"Bio::Roary::InflateClusters::_output_fh";
	"Bio::Roary::InflateClusters::_build__mcl_fh";
	"Bio::Roary::InflateClusters::cdhit_groups_filename";
	"Bio::Roary::InflateClusters::_mcl_fh";
	"Bio::Roary::InflateClusters::_inflate_line";
	"Bio::Roary::InflateClusters::BEGIN@20";
	"Bio::Roary::InflateClusters::_clustered_genes";
	"Bio::Roary::InflateClusters::CORE:open";
	"Bio::Roary::InflateClusters::BEGIN@19";
	"Bio::Roary::InflateClusters::BEGIN@106";
	"Bio::Roary::InflateClusters::DESTROY";
	"Bio::Roary::InflateClusters::_build__output_fh";
	"Bio::Roary::InflateClusters::CORE:print";
	"Bio::Roary::InflateClusters::_inflate_gene";
	"Bio::Roary::InflateClusters::CORE:readline";
	"Bio::Roary::InflateClusters::meta";
	"Bio::Roary::InflateClusters::mcl_filename";
	"Bio::Roary::InflateClusters::new";
	"Bio::Roary::InflateClusters::_clusters_fh";
	"Bio::Roary::InflateClusters::clusters_filename";
	"Bio::Roary::InflateClusters::output_file";
}
subgraph cluster_Eval_Closure_Sandbox_295 {
	label="Eval::Closure::Sandbox_295";
	"Eval::Closure::Sandbox_295::__ANON__[(eval 421)[Eval/Closure.pm:125]:119]";
	"Eval::Closure::Sandbox_295::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_209 {
	label="Eval::Closure::Sandbox_209";
	"Eval::Closure::Sandbox_209::__ANON__[(eval 310)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Bio_Location_Split {
	label="Bio::Location::Split";
	"Bio::Location::Split::BEGIN@99";
	"Bio::Location::Split::BEGIN@101";
}
subgraph cluster_Eval_Closure_Sandbox_76 {
	label="Eval::Closure::Sandbox_76";
	"Eval::Closure::Sandbox_76::__ANON__[(eval 101)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_218 {
	label="Eval::Closure::Sandbox_218";
	"Eval::Closure::Sandbox_218::__ANON__[(eval 319)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_368 {
	label="Eval::Closure::Sandbox_368";
	"Eval::Closure::Sandbox_368::__ANON__[(eval 511)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_228 {
	label="Eval::Closure::Sandbox_228";
	"Eval::Closure::Sandbox_228::__ANON__[(eval 345)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_AnnotationCollectionI {
	label="Bio::AnnotationCollectionI";
	"Bio::AnnotationCollectionI::BEGIN@132";
	"Bio::AnnotationCollectionI::BEGIN@137";
}
subgraph cluster_Eval_Closure_Sandbox_225 {
	label="Eval::Closure::Sandbox_225";
	"Eval::Closure::Sandbox_225::__ANON__[(eval 342)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_293 {
	label="Eval::Closure::Sandbox_293";
	"Eval::Closure::Sandbox_293::__ANON__[(eval 419)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Class_MOP_Deprecated {
	label="Class::MOP::Deprecated";
	"Class::MOP::Deprecated::BEGIN@5";
	"Class::MOP::Deprecated::BEGIN@7";
	"Class::MOP::Deprecated::BEGIN@4";
}
subgraph cluster_Safe {
	label="Safe";
	"Safe::BEGIN@29";
	"Safe::BEGIN@28";
	"Safe::BEGIN@188";
	"Safe::BEGIN@341";
	"Safe::BEGIN@2";
	"Safe::BEGIN@334";
	"Safe::CORE:match";
	"Safe::CORE:regcomp";
	"Safe::CORE:pack";
	"Safe::BEGIN@36";
	"Safe::BEGIN@46";
	"Safe::BEGIN@30";
	"Safe::BEGIN@3";
	"Safe::BEGIN@34";
	"Safe::BEGIN@4";
	"Safe::BEGIN@35";
	"Safe::BEGIN@282";
}
subgraph cluster_Eval_Closure_Sandbox_267 {
	label="Eval::Closure::Sandbox_267";
	"Eval::Closure::Sandbox_267::__ANON__[(eval 393)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_273 {
	label="Eval::Closure::Sandbox_273";
	"Eval::Closure::Sandbox_273::__ANON__[(eval 399)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_147 {
	label="Eval::Closure::Sandbox_147";
	"Eval::Closure::Sandbox_147::__ANON__[(eval 172)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_52 {
	label="Eval::Closure::Sandbox_52";
	"Eval::Closure::Sandbox_52::__ANON__[(eval 76)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_13 {
	label="Eval::Closure::Sandbox_13";
	"Eval::Closure::Sandbox_13::__ANON__[(eval 37)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_108 {
	label="Eval::Closure::Sandbox_108";
	"Eval::Closure::Sandbox_108::__ANON__[(eval 133)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_241 {
	label="Eval::Closure::Sandbox_241";
	"Eval::Closure::Sandbox_241::__ANON__[(eval 358)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_11 {
	label="Eval::Closure::Sandbox_11";
	"Eval::Closure::Sandbox_11::__ANON__[(eval 35)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_55 {
	label="Eval::Closure::Sandbox_55";
	"Eval::Closure::Sandbox_55::__ANON__[(eval 79)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Location_SplitLocationI {
	label="Bio::Location::SplitLocationI";
	"Bio::Location::SplitLocationI::BEGIN@84";
	"Bio::Location::SplitLocationI::BEGIN@82";
	"Bio::Location::SplitLocationI::BEGIN@80";
}
subgraph cluster_Eval_Closure_Sandbox_80 {
	label="Eval::Closure::Sandbox_80";
	"Eval::Closure::Sandbox_80::__ANON__[(eval 105)[Eval/Closure.pm:125]:27]";
}
subgraph cluster_Bio_LocationI {
	label="Bio::LocationI";
	"Bio::LocationI::BEGIN@79";
	"Bio::LocationI::BEGIN@75";
	"Bio::LocationI::BEGIN@77";
}
subgraph cluster_Bio_Roary_OrderGenes {
	label="Bio::Roary::OrderGenes";
	"Bio::Roary::OrderGenes::meta";
	"Bio::Roary::OrderGenes::groups_to_contigs";
	"Bio::Roary::OrderGenes::_build__groups_to_file_contigs";
	"Bio::Roary::OrderGenes::_reorder_connected_components";
	"Bio::Roary::OrderGenes::new";
	"Bio::Roary::OrderGenes::CORE:sort";
	"Bio::Roary::OrderGenes::BEGIN@352";
	"Bio::Roary::OrderGenes::__ANON__[lib/Bio/Roary/OrderGenes.pm:33]";
	"Bio::Roary::OrderGenes::_percentage_of_largest_weak_threshold";
	"Bio::Roary::OrderGenes::_build_groups_to_contigs";
	"Bio::Roary::OrderGenes::BEGIN@20";
	"Bio::Roary::OrderGenes::_create_accessory_graph";
	"Bio::Roary::OrderGenes::gff_files";
	"Bio::Roary::OrderGenes::BEGIN@19";
	"Bio::Roary::OrderGenes::_remove_weak_edges_from_graph";
	"Bio::Roary::OrderGenes::analyse_groups_obj";
	"Bio::Roary::OrderGenes::_build_number_of_files";
	"Bio::Roary::OrderGenes::DESTROY";
	"Bio::Roary::OrderGenes::group_order";
	"Bio::Roary::OrderGenes::group_graphs";
	"Bio::Roary::OrderGenes::_groups_to_file_contigs";
	"Bio::Roary::OrderGenes::_groups_qc";
	"Bio::Roary::OrderGenes::_add_groups_to_graph";
	"Bio::Roary::OrderGenes::number_of_files";
	"Bio::Roary::OrderGenes::BEGIN@22";
	"Bio::Roary::OrderGenes::BEGIN@18";
	"Bio::Roary::OrderGenes::_build_group_order";
	"Bio::Roary::OrderGenes::_build_group_graphs";
	"Bio::Roary::OrderGenes::BEGIN@21";
}
subgraph cluster_Eval_Closure_Sandbox_328 {
	label="Eval::Closure::Sandbox_328";
	"Eval::Closure::Sandbox_328::__ANON__[(eval 471)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_File_Find {
	label="File::Find";
	"File::Find::BEGIN@2";
	"File::Find::BEGIN@3";
	"File::Find::BEGIN@4";
	"File::Find::BEGIN@5";
	"File::Find::CORE:qr";
	"File::Find::BEGIN@349";
}
subgraph cluster_Eval_Closure_Sandbox_12 {
	label="Eval::Closure::Sandbox_12";
	"Eval::Closure::Sandbox_12::__ANON__[(eval 36)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Moose_Meta_Role_Method {
	label="Moose::Meta::Role::Method";
	"Moose::Meta::Role::Method::_new";
	"Moose::Meta::Role::Method::BEGIN@7";
	"Moose::Meta::Role::Method::BEGIN@4";
	"Moose::Meta::Role::Method::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_383 {
	label="Eval::Closure::Sandbox_383";
	"Eval::Closure::Sandbox_383::__ANON__[(eval 526)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Error_Simple {
	label="Error::Simple";
	"Error::Simple::BEGIN@260";
}
subgraph cluster_Exporter_Heavy {
	label="Exporter::Heavy";
	"Exporter::Heavy::_rebuild_cache";
	"Exporter::Heavy::BEGIN@197";
	"Exporter::Heavy::_push_tags";
	"Exporter::Heavy::heavy_export_tags";
	"Exporter::Heavy::CORE:subst";
	"Exporter::Heavy::__ANON__[Exporter/Heavy.pm:58]";
	"Exporter::Heavy::BEGIN@4";
	"Exporter::Heavy::CORE:match";
	"Exporter::Heavy::heavy_export";
	"Exporter::Heavy::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_331 {
	label="Eval::Closure::Sandbox_331";
	"Eval::Closure::Sandbox_331::__ANON__[(eval 474)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_294 {
	label="Eval::Closure::Sandbox_294";
	"Eval::Closure::Sandbox_294::__ANON__[(eval 420)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Moose_Meta_Method {
	label="Moose::Meta::Method";
	"Moose::Meta::Method::BEGIN@9";
	"Moose::Meta::Method::BEGIN@4";
	"Moose::Meta::Method::_new";
	"Moose::Meta::Method::BEGIN@7";
	"Moose::Meta::Method::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_284 {
	label="Eval::Closure::Sandbox_284";
	"Eval::Closure::Sandbox_284::__ANON__[(eval 410)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_152 {
	label="Eval::Closure::Sandbox_152";
	"Eval::Closure::Sandbox_152::__ANON__[(eval 178)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_constant {
	label="constant";
	"constant::import";
	"constant::BEGIN@4";
	"constant::BEGIN@36";
	"constant::BEGIN@3";
	"constant::BEGIN@25";
	"constant::BEGIN@29";
	"constant::CORE:regcomp";
	"constant::CORE:qr";
	"constant::BEGIN@65";
	"constant::BEGIN@2";
	"constant::BEGIN@127";
	"constant::BEGIN@6";
	"constant::CORE:match";
}
subgraph cluster_Bio_Factory_SequenceStreamI {
	label="Bio::Factory::SequenceStreamI";
	"Bio::Factory::SequenceStreamI::BEGIN@78";
	"Bio::Factory::SequenceStreamI::BEGIN@80";
}
subgraph cluster_Moose_Meta_Role_Method_Conflicting {
	label="Moose::Meta::Role::Method::Conflicting";
	"Moose::Meta::Role::Method::Conflicting::BEGIN@9";
	"Moose::Meta::Role::Method::Conflicting::BEGIN@7";
	"Moose::Meta::Role::Method::Conflicting::BEGIN@5";
	"Moose::Meta::Role::Method::Conflicting::BEGIN@4";
}
subgraph cluster_Bio_Root_Exception {
	label="Bio::Root::Exception";
	"Bio::Root::Exception::BEGIN@2";
}
subgraph cluster_Eval_Closure_Sandbox_75 {
	label="Eval::Closure::Sandbox_75";
	"Eval::Closure::Sandbox_75::__ANON__[(eval 100)[Eval/Closure.pm:125]:25]";
}
subgraph cluster_Eval_Closure_Sandbox_221 {
	label="Eval::Closure::Sandbox_221";
	"Eval::Closure::Sandbox_221::__ANON__[(eval 322)[Eval/Closure.pm:125]:162]";
}
subgraph cluster_Eval_Closure_Sandbox_164 {
	label="Eval::Closure::Sandbox_164";
	"Eval::Closure::Sandbox_164::__ANON__[(eval 195)[Eval/Closure.pm:125]:96]";
}
subgraph cluster_Eval_Closure_Sandbox_384 {
	label="Eval::Closure::Sandbox_384";
	"Eval::Closure::Sandbox_384::__ANON__[(eval 527)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_20 {
	label="Eval::Closure::Sandbox_20";
	"Eval::Closure::Sandbox_20::__ANON__[(eval 44)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_206 {
	label="Eval::Closure::Sandbox_206";
	"Eval::Closure::Sandbox_206::__ANON__[(eval 307)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_64 {
	label="Eval::Closure::Sandbox_64";
	"Eval::Closure::Sandbox_64::__ANON__[(eval 88)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_195 {
	label="Eval::Closure::Sandbox_195";
	"Eval::Closure::Sandbox_195::__ANON__[(eval 296)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_322 {
	label="Eval::Closure::Sandbox_322";
	"Eval::Closure::Sandbox_322::__ANON__[(eval 465)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_420 {
	label="Eval::Closure::Sandbox_420";
	"Eval::Closure::Sandbox_420::__ANON__[(eval 590)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_234 {
	label="Eval::Closure::Sandbox_234";
	"Eval::Closure::Sandbox_234::__ANON__[(eval 351)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_427 {
	label="Eval::Closure::Sandbox_427";
	"Eval::Closure::Sandbox_427::__ANON__[(eval 597)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_315 {
	label="Eval::Closure::Sandbox_315";
	"Eval::Closure::Sandbox_315::__ANON__[(eval 458)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_110 {
	label="Eval::Closure::Sandbox_110";
	"Eval::Closure::Sandbox_110::__ANON__[(eval 135)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_208 {
	label="Eval::Closure::Sandbox_208";
	"Eval::Closure::Sandbox_208::__ANON__[(eval 309)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_394 {
	label="Eval::Closure::Sandbox_394";
	"Eval::Closure::Sandbox_394::__ANON__[(eval 564)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_270 {
	label="Eval::Closure::Sandbox_270";
	"Eval::Closure::Sandbox_270::__ANON__[(eval 396)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_21 {
	label="Eval::Closure::Sandbox_21";
	"Eval::Closure::Sandbox_21::__ANON__[(eval 45)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_44 {
	label="Eval::Closure::Sandbox_44";
	"Eval::Closure::Sandbox_44::__ANON__[(eval 68)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_86 {
	label="Eval::Closure::Sandbox_86";
	"Eval::Closure::Sandbox_86::__ANON__[(eval 111)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_278 {
	label="Eval::Closure::Sandbox_278";
	"Eval::Closure::Sandbox_278::__ANON__[(eval 404)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Bio_Roary_GeneNamesFromGFF {
	label="Bio::Roary::GeneNamesFromGFF";
	"Bio::Roary::GeneNamesFromGFF::CORE:close";
	"Bio::Roary::GeneNamesFromGFF::gff_file";
	"Bio::Roary::GeneNamesFromGFF::BEGIN@65";
	"Bio::Roary::GeneNamesFromGFF::CORE:open";
	"Bio::Roary::GeneNamesFromGFF::CORE:readline";
	"Bio::Roary::GeneNamesFromGFF::BEGIN@17";
	"Bio::Roary::GeneNamesFromGFF::_tags_to_filter";
	"Bio::Roary::GeneNamesFromGFF::__ANON__[lib/Bio/Roary/GeneNamesFromGFF.pm:23]";
	"Bio::Roary::GeneNamesFromGFF::meta";
	"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name";
	"Bio::Roary::GeneNamesFromGFF::_awk_filter";
	"Bio::Roary::GeneNamesFromGFF::ids_to_product";
	"Bio::Roary::GeneNamesFromGFF::new";
	"Bio::Roary::GeneNamesFromGFF::CORE:match";
	"Bio::Roary::GeneNamesFromGFF::BEGIN@19";
	"Bio::Roary::GeneNamesFromGFF::CORE:subst";
	"Bio::Roary::GeneNamesFromGFF::ids_to_gene_name";
	"Bio::Roary::GeneNamesFromGFF::DESTROY";
}
subgraph cluster_Eval_Closure_Sandbox_340 {
	label="Eval::Closure::Sandbox_340";
	"Eval::Closure::Sandbox_340::__ANON__[(eval 483)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_166 {
	label="Eval::Closure::Sandbox_166";
	"Eval::Closure::Sandbox_166::__ANON__[(eval 197)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_File_Temp {
	label="File::Temp";
	"File::Temp::BEGIN@84";
	"File::Temp::BEGIN@97";
	"File::Temp::CORE:chmod";
	"File::Temp::BEGIN@96";
	"File::Temp::CORE:subst";
	"File::Temp::_replace_XX";
	"File::Temp::CORE:ftdir";
	"File::Temp::BEGIN@44";
	"File::Temp::CORE:match";
	"File::Temp::BEGIN@138";
	"File::Temp::BEGIN@87";
	"File::Temp::CORE:substcont";
	"File::Temp::__ANON__[File/Temp.pm:142]";
	"File::Temp::CORE:regcomp";
	"File::Temp::safe_level";
	"File::Temp::cleanup";
	"File::Temp::newdir";
	"File::Temp::tempdir";
	"File::Temp::BEGIN@18";
	"File::Temp::END";
	"File::Temp::CORE:sort";
	"File::Temp::BEGIN@15";
	"File::Temp::CORE:mkdir";
	"File::Temp::_parse_args";
	"File::Temp::BEGIN@9";
	"File::Temp::BEGIN@13";
	"File::Temp::BEGIN@12";
	"File::Temp::BEGIN@37";
	"File::Temp::BEGIN@95";
	"File::Temp::BEGIN@32";
	"File::Temp::BEGIN@14";
	"File::Temp::BEGIN@11";
	"File::Temp::BEGIN@17";
	"File::Temp::BEGIN@16";
	"File::Temp::BEGIN@108";
	"File::Temp::CORE:ftis";
	"File::Temp::__ANON__[File/Temp.pm:112]";
	"File::Temp::BEGIN@10";
	"File::Temp::_gettemp";
	"File::Temp::BEGIN@33";
	"File::Temp::BEGIN@91";
}
subgraph cluster_Bio_Range {
	label="Bio::Range";
	"Bio::Range::BEGIN@91";
	"Bio::Range::BEGIN@89";
	"Bio::Range::BEGIN@90";
	"Bio::Range::BEGIN@94";
}
subgraph cluster_Bio_Root_IO {
	label="Bio::Root::IO";
	"Bio::Root::IO::BEGIN@75";
	"Bio::Root::IO::BEGIN@7";
	"Bio::Root::IO::BEGIN@3";
	"Bio::Root::IO::BEGIN@359";
	"Bio::Root::IO::BEGIN@8";
	"Bio::Root::IO::BEGIN@4";
	"Bio::Root::IO::BEGIN@5";
	"Bio::Root::IO::BEGIN@144";
	"Bio::Root::IO::BEGIN@6";
	"Bio::Root::IO::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_188 {
	label="Eval::Closure::Sandbox_188";
	"Eval::Closure::Sandbox_188::__ANON__[(eval 219)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_25 {
	label="Eval::Closure::Sandbox_25";
	"Eval::Closure::Sandbox_25::__ANON__[(eval 49)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_251 {
	label="Eval::Closure::Sandbox_251";
	"Eval::Closure::Sandbox_251::__ANON__[(eval 377)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_229 {
	label="Eval::Closure::Sandbox_229";
	"Eval::Closure::Sandbox_229::__ANON__[(eval 346)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_190 {
	label="Eval::Closure::Sandbox_190";
	"Eval::Closure::Sandbox_190::__ANON__[(eval 221)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_362 {
	label="Eval::Closure::Sandbox_362";
	"Eval::Closure::Sandbox_362::__ANON__[(eval 505)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_319 {
	label="Eval::Closure::Sandbox_319";
	"Eval::Closure::Sandbox_319::__ANON__[(eval 462)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_96 {
	label="Eval::Closure::Sandbox_96";
	"Eval::Closure::Sandbox_96::__ANON__[(eval 121)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_412 {
	label="Eval::Closure::Sandbox_412";
	"Eval::Closure::Sandbox_412::__ANON__[(eval 582)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_378 {
	label="Eval::Closure::Sandbox_378";
	"Eval::Closure::Sandbox_378::__ANON__[(eval 521)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_97 {
	label="Eval::Closure::Sandbox_97";
	"Eval::Closure::Sandbox_97::__ANON__[(eval 122)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Devel_StackTrace_Frame {
	label="Devel::StackTrace::Frame";
	"Devel::StackTrace::Frame::BEGIN@7";
	"Devel::StackTrace::Frame::BEGIN@4";
	"Devel::StackTrace::Frame::BEGIN@3";
	"Devel::StackTrace::Frame::BEGIN@8";
}
subgraph cluster_Eval_Closure_Sandbox_409 {
	label="Eval::Closure::Sandbox_409";
	"Eval::Closure::Sandbox_409::__ANON__[(eval 579)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_302 {
	label="Eval::Closure::Sandbox_302";
	"Eval::Closure::Sandbox_302::__ANON__[(eval 445)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Class_MOP_Method {
	label="Class::MOP::Method";
	"Class::MOP::Method::BEGIN@5";
	"Class::MOP::Method::clone";
	"Class::MOP::Method::_new";
	"Class::MOP::Method::body";
	"Class::MOP::Method::detach_from_class";
	"Class::MOP::Method::BEGIN@7";
	"Class::MOP::Method::package_name";
	"Class::MOP::Method::attach_to_class";
	"Class::MOP::Method::wrap";
	"Class::MOP::Method::BEGIN@14";
	"Class::MOP::Method::BEGIN@4";
	"Class::MOP::Method::name";
	"Class::MOP::Method::associated_metaclass";
	"Class::MOP::Method::is_stub";
	"Class::MOP::Method::BEGIN@9";
	"Class::MOP::Method::_set_original_method";
}
subgraph cluster_Eval_Closure_Sandbox_298 {
	label="Eval::Closure::Sandbox_298";
	"Eval::Closure::Sandbox_298::__ANON__[(eval 441)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Exception_Class_Base {
	label="Exception::Class::Base";
	"Exception::Class::Base::BEGIN@3";
	"Exception::Class::Base::BEGIN@42";
	"Exception::Class::Base::BEGIN@71";
	"Exception::Class::Base::BEGIN@6";
	"Exception::Class::Base::BEGIN@12";
	"Exception::Class::Base::BEGIN@10";
	"Exception::Class::Base::BEGIN@45";
	"Exception::Class::Base::BEGIN@8";
	"Exception::Class::Base::BEGIN@4";
	"Exception::Class::Base::BEGIN@7";
	"Exception::Class::Base::BEGIN@51";
}
subgraph cluster_Moose_Meta_TypeConstraint_Union {
	label="Moose::Meta::TypeConstraint::Union";
	"Moose::Meta::TypeConstraint::Union::BEGIN@12";
	"Moose::Meta::TypeConstraint::Union::BEGIN@4";
	"Moose::Meta::TypeConstraint::Union::BEGIN@5";
	"Moose::Meta::TypeConstraint::Union::BEGIN@10";
	"Moose::Meta::TypeConstraint::Union::meta";
	"Moose::Meta::TypeConstraint::Union::BEGIN@6";
	"Moose::Meta::TypeConstraint::Union::BEGIN@8";
}
subgraph cluster_Moose_Meta_TypeCoercion {
	label="Moose::Meta::TypeCoercion";
	"Moose::Meta::TypeCoercion::BEGIN@11";
	"Moose::Meta::TypeCoercion::BEGIN@4";
	"Moose::Meta::TypeCoercion::BEGIN@8";
	"Moose::Meta::TypeCoercion::BEGIN@9";
	"Moose::Meta::TypeCoercion::BEGIN@6";
	"Moose::Meta::TypeCoercion::BEGIN@1";
	"Moose::Meta::TypeCoercion::meta";
	"Moose::Meta::TypeCoercion::BEGIN@2";
	"Moose::Meta::TypeCoercion::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_231 {
	label="Eval::Closure::Sandbox_231";
	"Eval::Closure::Sandbox_231::__ANON__[(eval 348)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_31 {
	label="Eval::Closure::Sandbox_31";
	"Eval::Closure::Sandbox_31::__ANON__[(eval 55)[Eval/Closure.pm:125]:52]";
}
subgraph cluster_Moose_Meta_Role_Application_ToClass {
	label="Moose::Meta::Role::Application::ToClass";
	"Moose::Meta::Role::Application::ToClass::check_required_methods";
	"Moose::Meta::Role::Application::ToClass::check_role_exclusions";
	"Moose::Meta::Role::Application::ToClass::BEGIN@9";
	"Moose::Meta::Role::Application::ToClass::apply_method_modifiers";
	"Moose::Meta::Role::Application::ToClass::BEGIN@8";
	"Moose::Meta::Role::Application::ToClass::_new";
	"Moose::Meta::Role::Application::ToClass::BEGIN@10";
	"Moose::Meta::Role::Application::ToClass::apply_methods";
	"Moose::Meta::Role::Application::ToClass::BEGIN@12";
	"Moose::Meta::Role::Application::ToClass::apply";
	"Moose::Meta::Role::Application::ToClass::BEGIN@6";
	"Moose::Meta::Role::Application::ToClass::apply_attributes";
	"Moose::Meta::Role::Application::ToClass::meta";
	"Moose::Meta::Role::Application::ToClass::BEGIN@4";
	"Moose::Meta::Role::Application::ToClass::BEGIN@5";
	"Moose::Meta::Role::Application::ToClass::apply_override_method_modifiers";
	"Moose::Meta::Role::Application::ToClass::check_required_attributes";
}
subgraph cluster_Eval_Closure_Sandbox_352 {
	label="Eval::Closure::Sandbox_352";
	"Eval::Closure::Sandbox_352::CORE:match";
	"Eval::Closure::Sandbox_352::__ANON__[(eval 495)[Eval/Closure.pm:125]:193]";
}
subgraph cluster_Eval_Closure_Sandbox_217 {
	label="Eval::Closure::Sandbox_217";
	"Eval::Closure::Sandbox_217::__ANON__[(eval 318)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_396 {
	label="Eval::Closure::Sandbox_396";
	"Eval::Closure::Sandbox_396::__ANON__[(eval 566)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Bio_SeqAnalysisParserI {
	label="Bio::SeqAnalysisParserI";
	"Bio::SeqAnalysisParserI::BEGIN@91";
	"Bio::SeqAnalysisParserI::BEGIN@92";
	"Bio::SeqAnalysisParserI::BEGIN@93";
}
subgraph cluster_Bio_Roary_External_ProteinMuscleAlignmentFromNucleotides {
	label="Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@88";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@23";
}
subgraph cluster_Eval_Closure_Sandbox_220 {
	label="Eval::Closure::Sandbox_220";
	"Eval::Closure::Sandbox_220::__ANON__[(eval 321)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_146 {
	label="Eval::Closure::Sandbox_146";
	"Eval::Closure::Sandbox_146::__ANON__[(eval 171)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_File_Path {
	label="File::Path";
	"File::Path::rmtree";
	"File::Path::CORE:closedir";
	"File::Path::CORE:lstat";
	"File::Path::BEGIN@6";
	"File::Path::BEGIN@8";
	"File::Path::_is_subdir";
	"File::Path::CORE:stat";
	"File::Path::BEGIN@10";
	"File::Path::BEGIN@4";
	"File::Path::BEGIN@18";
	"File::Path::CORE:rmdir";
	"File::Path::BEGIN@7";
	"File::Path::CORE:chdir";
	"File::Path::CORE:open_dir";
	"File::Path::CORE:unlink";
	"File::Path::CORE:ftdir";
	"File::Path::BEGIN@19";
	"File::Path::CORE:match";
	"File::Path::CORE:readdir";
	"File::Path::BEGIN@3";
	"File::Path::BEGIN@329";
	"File::Path::_rmtree";
	"File::Path::CORE:subst";
}
subgraph cluster_Eval_Closure_Sandbox_236 {
	label="Eval::Closure::Sandbox_236";
	"Eval::Closure::Sandbox_236::__ANON__[(eval 353)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_184 {
	label="Eval::Closure::Sandbox_184";
	"Eval::Closure::Sandbox_184::__ANON__[(eval 215)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Moose_Meta_Role_Application_ToInstance {
	label="Moose::Meta::Role::Application::ToInstance";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@11";
	"Moose::Meta::Role::Application::ToInstance::meta";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@6";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@9";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@5";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@19";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@4";
	"Moose::Meta::Role::Application::ToInstance::BEGIN@8";
}
subgraph cluster_Eval_Closure_Sandbox_196 {
	label="Eval::Closure::Sandbox_196";
	"Eval::Closure::Sandbox_196::__ANON__[(eval 297)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_423 {
	label="Eval::Closure::Sandbox_423";
	"Eval::Closure::Sandbox_423::__ANON__[(eval 593)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_149 {
	label="Eval::Closure::Sandbox_149";
	"Eval::Closure::Sandbox_149::__ANON__[(eval 174)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_82 {
	label="Eval::Closure::Sandbox_82";
	"Eval::Closure::Sandbox_82::__ANON__[(eval 107)[Eval/Closure.pm:125]:46]";
}
subgraph cluster_bytes {
	label="bytes";
	"bytes::import";
}
subgraph cluster_Array_Utils {
	label="Array::Utils";
	"Array::Utils::BEGIN@91";
}
subgraph cluster_B_Deparse {
	label="B::Deparse";
	"B::Deparse::CORE:qr";
	"B::Deparse::BEGIN@1863";
	"B::Deparse::BEGIN@11";
	"B::Deparse::BEGIN@3914";
	"B::Deparse::BEGIN@1259";
	"B::Deparse::BEGIN@3721";
	"B::Deparse::BEGIN@26";
	"B::Deparse::BEGIN@3051";
	"B::Deparse::BEGIN@29";
	"B::Deparse::BEGIN@24";
	"B::Deparse::BEGIN@483";
	"B::Deparse::CORE:pack";
	"B::Deparse::BEGIN@616";
	"B::Deparse::BEGIN@12";
	"B::Deparse::BEGIN@39";
	"B::Deparse::CORE:sort";
	"B::Deparse::BEGIN@25";
	"B::Deparse::BEGIN@691";
	"B::Deparse::BEGIN@2248";
	"B::Deparse::BEGIN@4020";
	"B::Deparse::BEGIN@3653";
	"B::Deparse::BEGIN@3720";
	"B::Deparse::BEGIN@3652";
	"B::Deparse::BEGIN@2279";
}
subgraph cluster_Package_Stash_XS {
	label="Package::Stash::XS";
	"Package::Stash::XS::BEGIN@8";
	"Package::Stash::XS::has_symbol";
	"Package::Stash::XS::get_symbol";
	"Package::Stash::XS::remove_symbol";
	"Package::Stash::XS::list_all_symbols";
	"Package::Stash::XS::add_symbol";
	"Package::Stash::XS::name";
	"Package::Stash::XS::get_or_add_symbol";
	"Package::Stash::XS::namespace";
	"Package::Stash::XS::get_all_symbols";
	"Package::Stash::XS::new";
	"Package::Stash::XS::BEGIN@13";
	"Package::Stash::XS::BEGIN@2";
	"Package::Stash::XS::BEGIN@9";
	"Package::Stash::XS::BEGIN@10";
}
subgraph cluster_Heap071_Elem {
	label="Heap071::Elem";
	"Heap071::Elem::BEGIN@4";
	"Heap071::Elem::BEGIN@3";
	"Heap071::Elem::heap";
}
subgraph cluster_Graph {
	label="Graph";
	"Graph::add_vertex";
	"Graph::_opt_get";
	"Graph::_edges";
	"Graph::BEGIN@28";
	"Graph::get_edge_attribute";
	"Graph::BEGIN@86";
	"Graph::edges05";
	"Graph::_add_edge";
	"Graph::set_edge_attribute";
	"Graph::BEGIN@2155";
	"Graph::BEGIN@35";
	"Graph::has_edge";
	"Graph::BEGIN@178";
	"Graph::_root_opt";
	"Graph::_next_random";
	"Graph::_vertex_ids";
	"Graph::BEGIN@34";
	"Graph::vertices05";
	"Graph::BEGIN@36";
	"Graph::MST_Prim";
	"Graph::edges";
	"Graph::_check_cache";
	"Graph::expect_non_multiedged";
	"Graph::unique_vertices";
	"Graph::BEGIN@116";
	"Graph::add_weighted_edge";
	"Graph::add_edges";
	"Graph::BEGIN@39";
	"Graph::_connected_components";
	"Graph::multivertexed";
	"Graph::multiedged";
	"Graph::BEGIN@38";
	"Graph::BEGIN@31";
	"Graph::__ANON__[Graph.pm:2741]";
	"Graph::BEGIN@30";
	"Graph::add_edge";
	"Graph::has_vertex";
	"Graph::BEGIN@55";
	"Graph::BEGIN@15";
	"Graph::new";
	"Graph::connected_components";
	"Graph::_connected_components_compute";
	"Graph::BEGIN@32";
	"Graph::BEGIN@40";
	"Graph::is_compat02";
	"Graph::countvertexed";
	"Graph::BEGIN@42";
	"Graph::_MST_add";
	"Graph::_heap_walk";
	"Graph::_opt_unknown";
	"Graph::BEGIN@33";
	"Graph::vertices";
	"Graph::countedged";
	"Graph::successors";
	"Graph::BEGIN@3";
	"Graph::omniedged";
	"Graph::BEGIN@13";
	"Graph::expect_undirected";
	"Graph::directed";
	"Graph::_edges_from";
	"Graph::_get_options";
	"Graph::__ANON__[Graph.pm:2754]";
	"Graph::BEGIN@29";
	"Graph::_opt";
	"Graph::__ANON__[Graph.pm:2745]";
	"Graph::BEGIN@1733";
	"Graph::CORE:sort";
	"Graph::BEGIN@5";
	"Graph::has_union_find";
}
subgraph cluster_Eval_Closure_Sandbox_334 {
	label="Eval::Closure::Sandbox_334";
	"Eval::Closure::Sandbox_334::__ANON__[(eval 477)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_Bio_PrimarySeqI {
	label="Bio::PrimarySeqI";
	"Bio::PrimarySeqI::BEGIN@124";
	"Bio::PrimarySeqI::BEGIN@123";
	"Bio::PrimarySeqI::BEGIN@126";
}
subgraph cluster_Eval_Closure_Sandbox_70 {
	label="Eval::Closure::Sandbox_70";
	"Eval::Closure::Sandbox_70::__ANON__[(eval 95)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_312 {
	label="Eval::Closure::Sandbox_312";
	"Eval::Closure::Sandbox_312::__ANON__[(eval 455)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_37 {
	label="Eval::Closure::Sandbox_37";
	"Eval::Closure::Sandbox_37::__ANON__[(eval 61)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Graph_Traversal {
	label="Graph::Traversal";
	"Graph::Traversal::__ANON__[Graph/Traversal.pm:26]";
	"Graph::Traversal::add_order";
	"Graph::Traversal::configure";
	"Graph::Traversal::new";
	"Graph::Traversal::postorder";
	"Graph::Traversal::BEGIN@3";
	"Graph::Traversal::visit_preorder";
	"Graph::Traversal::visit";
	"Graph::Traversal::reset";
	"Graph::Traversal::_order";
	"Graph::Traversal::visit_postorder";
	"Graph::Traversal::graph";
	"Graph::Traversal::seeing";
	"Graph::Traversal::next";
	"Graph::Traversal::_callbacks";
}
subgraph cluster_Graph_AdjacencyMap_Vertex {
	label="Graph::AdjacencyMap::Vertex";
	"Graph::AdjacencyMap::Vertex::BEGIN@15";
	"Graph::AdjacencyMap::Vertex::BEGIN@13";
	"Graph::AdjacencyMap::Vertex::BEGIN@12";
	"Graph::AdjacencyMap::Vertex::BEGIN@7";
}
subgraph cluster_version {
	label="version";
	"version::(bool";
	"version::(cmp";
}
subgraph cluster_Bio_Roary_Exceptions {
	label="Bio::Roary::Exceptions";
	"Bio::Roary::Exceptions::BEGIN@11";
}
subgraph cluster_Eval_Closure_Sandbox_287 {
	label="Eval::Closure::Sandbox_287";
	"Eval::Closure::Sandbox_287::__ANON__[(eval 413)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_utf8 {
	label="utf8";
	"utf8::BEGIN@147";
	"utf8::BEGIN@178";
	"utf8::BEGIN@166";
	"utf8::AUTOLOAD";
	"utf8::CORE:match";
	"utf8::_loose_name";
	"utf8::BEGIN@2";
	"utf8::BEGIN@654";
	"utf8::SWASHNEW";
	"utf8::BEGIN@3";
	"utf8::upgrade";
	"utf8::downgrade";
	"utf8::BEGIN@153";
	"utf8::CORE:subst";
	"utf8::BEGIN@542";
}
subgraph cluster_Eval_Closure_Sandbox_245 {
	label="Eval::Closure::Sandbox_245";
	"Eval::Closure::Sandbox_245::__ANON__[(eval 371)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_306 {
	label="Eval::Closure::Sandbox_306";
	"Eval::Closure::Sandbox_306::CORE:match";
	"Eval::Closure::Sandbox_306::__ANON__[(eval 449)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_281 {
	label="Eval::Closure::Sandbox_281";
	"Eval::Closure::Sandbox_281::CORE:match";
	"Eval::Closure::Sandbox_281::__ANON__[(eval 407)[Eval/Closure.pm:125]:192]";
}
subgraph cluster_Eval_Closure_Sandbox_92 {
	label="Eval::Closure::Sandbox_92";
	"Eval::Closure::Sandbox_92::__ANON__[(eval 117)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_233 {
	label="Eval::Closure::Sandbox_233";
	"Eval::Closure::Sandbox_233::__ANON__[(eval 350)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_292 {
	label="Eval::Closure::Sandbox_292";
	"Eval::Closure::Sandbox_292::__ANON__[(eval 418)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Number_Compare {
	label="Number::Compare";
	"Number::Compare::BEGIN@2";
	"Number::Compare::BEGIN@4";
	"Number::Compare::BEGIN@3";
}
subgraph cluster_Moose_Meta_Method_Meta {
	label="Moose::Meta::Method::Meta";
	"Moose::Meta::Method::Meta::wrap";
	"Moose::Meta::Method::Meta::BEGIN@7";
	"Moose::Meta::Method::Meta::BEGIN@4";
	"Moose::Meta::Method::Meta::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_112 {
	label="Eval::Closure::Sandbox_112";
	"Eval::Closure::Sandbox_112::__ANON__[(eval 137)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_19 {
	label="Eval::Closure::Sandbox_19";
	"Eval::Closure::Sandbox_19::__ANON__[(eval 43)[Eval/Closure.pm:125]:55]";
}
subgraph cluster_Bio_Factory_ObjectBuilderI {
	label="Bio::Factory::ObjectBuilderI";
	"Bio::Factory::ObjectBuilderI::BEGIN@96";
	"Bio::Factory::ObjectBuilderI::BEGIN@95";
	"Bio::Factory::ObjectBuilderI::BEGIN@98";
}
subgraph cluster_Eval_Closure_Sandbox_127 {
	label="Eval::Closure::Sandbox_127";
	"Eval::Closure::Sandbox_127::__ANON__[(eval 152)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_408 {
	label="Eval::Closure::Sandbox_408";
	"Eval::Closure::Sandbox_408::__ANON__[(eval 578)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_41 {
	label="Eval::Closure::Sandbox_41";
	"Eval::Closure::Sandbox_41::__ANON__[(eval 65)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_248 {
	label="Eval::Closure::Sandbox_248";
	"Eval::Closure::Sandbox_248::__ANON__[(eval 374)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Bio_Seq {
	label="Bio::Seq";
	"Bio::Seq::BEGIN@464";
	"Bio::Seq::BEGIN@459";
	"Bio::Seq::BEGIN@461";
	"Bio::Seq::BEGIN@462";
}
subgraph cluster_Try_Tiny {
	label="Try::Tiny";
	"Try::Tiny::BEGIN@15";
	"Try::Tiny::BEGIN@12";
	"Try::Tiny::BEGIN@6";
	"Try::Tiny::BEGIN@2";
	"Try::Tiny::BEGIN@18";
	"Try::Tiny::BEGIN@1";
	"Try::Tiny::BEGIN@9";
	"Try::Tiny::catch";
	"Try::Tiny::try";
	"Try::Tiny::BEGIN@10";
}
subgraph cluster_parent {
	label="parent";
	"parent::BEGIN@25";
	"parent::BEGIN@2";
	"parent::CORE:subst";
	"parent::import";
	"parent::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_28 {
	label="Eval::Closure::Sandbox_28";
	"Eval::Closure::Sandbox_28::__ANON__[(eval 52)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Moose_Meta_Role_Attribute {
	label="Moose::Meta::Role::Attribute";
	"Moose::Meta::Role::Attribute::BEGIN@4";
	"Moose::Meta::Role::Attribute::BEGIN@7";
	"Moose::Meta::Role::Attribute::BEGIN@10";
	"Moose::Meta::Role::Attribute::original_role";
	"Moose::Meta::Role::Attribute::associated_role";
	"Moose::Meta::Role::Attribute::BEGIN@8";
	"Moose::Meta::Role::Attribute::attribute_for_class";
	"Moose::Meta::Role::Attribute::BEGIN@5";
	"Moose::Meta::Role::Attribute::BEGIN@12";
	"Moose::Meta::Role::Attribute::new";
	"Moose::Meta::Role::Attribute::attach_to_role";
	"Moose::Meta::Role::Attribute::original_options";
	"Moose::Meta::Role::Attribute::_original_role";
}
subgraph cluster_Eval_Closure_Sandbox_385 {
	label="Eval::Closure::Sandbox_385";
	"Eval::Closure::Sandbox_385::__ANON__[(eval 528)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_255 {
	label="Eval::Closure::Sandbox_255";
	"Eval::Closure::Sandbox_255::__ANON__[(eval 381)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_B {
	label="B";
	"B::BEGIN@9";
	"B::BEGIN@17";
	"B::opnumber";
	"B::perlstring";
	"B::threadsv_names";
	"B::BEGIN@254";
}
subgraph cluster_Eval_Closure_Sandbox_388 {
	label="Eval::Closure::Sandbox_388";
	"Eval::Closure::Sandbox_388::CORE:match";
	"Eval::Closure::Sandbox_388::__ANON__[(eval 531)[Eval/Closure.pm:125]:432]";
}
subgraph cluster_metaclass {
	label="metaclass";
	"metaclass::import";
	"metaclass::BEGIN@8";
	"metaclass::BEGIN@5";
	"metaclass::BEGIN@7";
	"metaclass::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_201 {
	label="Eval::Closure::Sandbox_201";
	"Eval::Closure::Sandbox_201::__ANON__[(eval 302)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_UNIVERSAL {
	label="UNIVERSAL";
	"UNIVERSAL::isa";
	"UNIVERSAL::VERSION";
	"UNIVERSAL::can";
}
subgraph cluster_Moose_Meta_TypeConstraint_Class {
	label="Moose::Meta::TypeConstraint::Class";
	"Moose::Meta::TypeConstraint::Class::__ANON__[Moose/Meta/TypeConstraint/Class.pm:25]";
	"Moose::Meta::TypeConstraint::Class::BEGIN@5";
	"Moose::Meta::TypeConstraint::Class::class";
	"Moose::Meta::TypeConstraint::Class::BEGIN@10";
	"Moose::Meta::TypeConstraint::Class::BEGIN@6";
	"Moose::Meta::TypeConstraint::Class::new";
	"Moose::Meta::TypeConstraint::Class::_new";
	"Moose::Meta::TypeConstraint::Class::meta";
	"Moose::Meta::TypeConstraint::Class::BEGIN@9";
	"Moose::Meta::TypeConstraint::Class::BEGIN@8";
	"Moose::Meta::TypeConstraint::Class::BEGIN@4";
	"Moose::Meta::TypeConstraint::Class::BEGIN@12";
}
subgraph cluster_Eval_Closure_Sandbox_375 {
	label="Eval::Closure::Sandbox_375";
	"Eval::Closure::Sandbox_375::__ANON__[(eval 518)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_101 {
	label="Eval::Closure::Sandbox_101";
	"Eval::Closure::Sandbox_101::__ANON__[(eval 126)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Meta_Class {
	label="Moose::Meta::Class";
	"Moose::Meta::Class::_inline_params";
	"Moose::Meta::Class::_inline_check_required_attr";
	"Moose::Meta::Class::BEGIN@4";
	"Moose::Meta::Class::_inline_throw_exception";
	"Moose::Meta::Class::_base_metaclasses";
	"Moose::Meta::Class::BEGIN@13";
	"Moose::Meta::Class::immutable_trait";
	"Moose::Meta::Class::initialize";
	"Moose::Meta::Class::CORE:match";
	"Moose::Meta::Class::add_attribute";
	"Moose::Meta::Class::BEGIN@9";
	"Moose::Meta::Class::BEGIN@22";
	"Moose::Meta::Class::_inline_triggers";
	"Moose::Meta::Class::_process_attribute";
	"Moose::Meta::Class::excludes_role";
	"Moose::Meta::Class::BEGIN@20";
	"Moose::Meta::Class::_immutable_options";
	"Moose::Meta::Class::_inline_init_attr_from_constructor";
	"Moose::Meta::Class::BEGIN@18";
	"Moose::Meta::Class::_inline_extra_init";
	"Moose::Meta::Class::_get_role_applications";
	"Moose::Meta::Class::BEGIN@5";
	"Moose::Meta::Class::add_role";
	"Moose::Meta::Class::_process_new_attribute";
	"Moose::Meta::Class::BEGIN@7";
	"Moose::Meta::Class::_inline_BUILDALL";
	"Moose::Meta::Class::__ANON__[Moose/Meta/Class.pm:34]";
	"Moose::Meta::Class::CORE:subst";
	"Moose::Meta::Class::BEGIN@19";
	"Moose::Meta::Class::BEGIN@8";
	"Moose::Meta::Class::BEGIN@14";
	"Moose::Meta::Class::CORE:sort";
	"Moose::Meta::Class::BEGIN@15";
	"Moose::Meta::Class::_generate_fallback_constructor";
	"Moose::Meta::Class::BEGIN@16";
	"Moose::Meta::Class::_eval_environment";
	"Moose::Meta::Class::roles";
	"Moose::Meta::Class::add_role_application";
	"Moose::Meta::Class::BEGIN@17";
	"Moose::Meta::Class::_meta_method_class";
	"Moose::Meta::Class::superclasses";
	"Moose::Meta::Class::_inline_init_attr_from_default";
	"Moose::Meta::Class::BEGIN@10";
	"Moose::Meta::Class::BEGIN@11";
	"Moose::Meta::Class::_inline_slot_initializer";
	"Moose::Meta::Class::constructor_class";
	"Moose::Meta::Class::_inline_BUILDARGS";
	"Moose::Meta::Class::destructor_class";
	"Moose::Meta::Class::__ANON__[Moose/Meta/Class.pm:28]";
}
subgraph cluster_Bio_Roary_AnnotateGroups {
	label="Bio::Roary::AnnotateGroups";
	"Bio::Roary::AnnotateGroups::CORE:readline";
	"Bio::Roary::AnnotateGroups::CORE:close";
	"Bio::Roary::AnnotateGroups::BEGIN@22";
	"Bio::Roary::AnnotateGroups::_groups_to_id_names";
	"Bio::Roary::AnnotateGroups::_ids_to_product";
	"Bio::Roary::AnnotateGroups::CORE:print";
	"Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
	"Bio::Roary::AnnotateGroups::output_filename";
	"Bio::Roary::AnnotateGroups::BEGIN@325";
	"Bio::Roary::AnnotateGroups::BEGIN@21";
	"Bio::Roary::AnnotateGroups::BEGIN@25";
	"Bio::Roary::AnnotateGroups::_groups";
	"Bio::Roary::AnnotateGroups::CORE:regcomp";
	"Bio::Roary::AnnotateGroups::new";
	"Bio::Roary::AnnotateGroups::_ids_to_gene_names";
	"Bio::Roary::AnnotateGroups::BEGIN@19";
	"Bio::Roary::AnnotateGroups::BEGIN@20";
	"Bio::Roary::AnnotateGroups::_ids_grouped_by_gene_name_for_group";
	"Bio::Roary::AnnotateGroups::consensus_product_for_id_names";
	"Bio::Roary::AnnotateGroups::_build__ids_to_gene_names";
	"Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names";
	"Bio::Roary::AnnotateGroups::gff_files";
	"Bio::Roary::AnnotateGroups::meta";
	"Bio::Roary::AnnotateGroups::CORE:open";
	"Bio::Roary::AnnotateGroups::_builder__groups_to_id_names";
	"Bio::Roary::AnnotateGroups::_split_groups";
	"Bio::Roary::AnnotateGroups::CORE:match";
	"Bio::Roary::AnnotateGroups::_consensus_gene_name_for_group";
	"Bio::Roary::AnnotateGroups::_group_default_prefix";
	"Bio::Roary::AnnotateGroups::groups_filename";
	"Bio::Roary::AnnotateGroups::CORE:sort";
	"Bio::Roary::AnnotateGroups::_ids_to_groups";
	"Bio::Roary::AnnotateGroups::__ANON__[lib/Bio/Roary/AnnotateGroups.pm:31]";
	"Bio::Roary::AnnotateGroups::_generate__ids_to_groups";
	"Bio::Roary::AnnotateGroups::reannotate";
	"Bio::Roary::AnnotateGroups::_build__output_fh";
	"Bio::Roary::AnnotateGroups::BUILD";
	"Bio::Roary::AnnotateGroups::_filtered_gff_files";
	"Bio::Roary::AnnotateGroups::DESTROY";
	"Bio::Roary::AnnotateGroups::_build__filtered_gff_files";
	"Bio::Roary::AnnotateGroups::BEGIN@23";
	"Bio::Roary::AnnotateGroups::_output_fh";
}
subgraph cluster_Moose_Meta_Method_Destructor {
	label="Moose::Meta::Method::Destructor";
	"Moose::Meta::Method::Destructor::BEGIN@9";
	"Moose::Meta::Method::Destructor::BEGIN@5";
	"Moose::Meta::Method::Destructor::_generate_DEMOLISHALL";
	"Moose::Meta::Method::Destructor::BEGIN@4";
	"Moose::Meta::Method::Destructor::BEGIN@11";
	"Moose::Meta::Method::Destructor::_initialize_body";
	"Moose::Meta::Method::Destructor::BEGIN@8";
	"Moose::Meta::Method::Destructor::_generate_fallback_destructor";
	"Moose::Meta::Method::Destructor::options";
	"Moose::Meta::Method::Destructor::BEGIN@14";
	"Moose::Meta::Method::Destructor::BEGIN@7";
	"Moose::Meta::Method::Destructor::new";
	"Moose::Meta::Method::Destructor::is_needed";
	"Moose::Meta::Method::Destructor::try {...} ";
}
subgraph cluster_Bio_SeqI {
	label="Bio::SeqI";
	"Bio::SeqI::BEGIN@116";
	"Bio::SeqI::BEGIN@111";
}
subgraph cluster_Bio_Tools_IUPAC {
	label="Bio::Tools::IUPAC";
	"Bio::Tools::IUPAC::BEGIN@170";
	"Bio::Tools::IUPAC::BEGIN@168";
	"Bio::Tools::IUPAC::iupac_iup";
	"Bio::Tools::IUPAC::iupac_iub";
	"Bio::Tools::IUPAC::BEGIN@169";
	"Bio::Tools::IUPAC::BEGIN@172";
}
subgraph cluster_Eval_Closure_Sandbox_66 {
	label="Eval::Closure::Sandbox_66";
	"Eval::Closure::Sandbox_66::__ANON__[(eval 91)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_AnnotatableI {
	label="Bio::AnnotatableI";
	"Bio::AnnotatableI::BEGIN@84";
	"Bio::AnnotatableI::BEGIN@86";
}
subgraph cluster_Eval_Closure_Sandbox_159 {
	label="Eval::Closure::Sandbox_159";
	"Eval::Closure::Sandbox_159::__ANON__[(eval 190)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_3 {
	label="Eval::Closure::Sandbox_3";
	"Eval::Closure::Sandbox_3::__ANON__[(eval 27)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_185 {
	label="Eval::Closure::Sandbox_185";
	"Eval::Closure::Sandbox_185::__ANON__[(eval 216)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_356 {
	label="Eval::Closure::Sandbox_356";
	"Eval::Closure::Sandbox_356::__ANON__[(eval 499)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Tie_StdHash {
	label="Tie::StdHash";
	"Tie::StdHash::TIEHASH";
}
subgraph cluster_Eval_Closure_Sandbox_139 {
	label="Eval::Closure::Sandbox_139";
	"Eval::Closure::Sandbox_139::__ANON__[(eval 164)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Class_Load {
	label="Class::Load";
	"Class::Load::BEGIN@6";
	"Class::Load::BEGIN@10";
	"Class::Load::BEGIN@7";
	"Class::Load::BEGIN@1";
	"Class::Load::BEGIN@5";
	"Class::Load::BEGIN@9";
	"Class::Load::BEGIN@2";
	"Class::Load::BEGIN@8";
	"Class::Load::BEGIN@16";
}
subgraph cluster_Eval_Closure_Sandbox_347 {
	label="Eval::Closure::Sandbox_347";
	"Eval::Closure::Sandbox_347::__ANON__[(eval 490)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Eval_Closure_Sandbox_87 {
	label="Eval::Closure::Sandbox_87";
	"Eval::Closure::Sandbox_87::__ANON__[(eval 112)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_58 {
	label="Eval::Closure::Sandbox_58";
	"Eval::Closure::Sandbox_58::__ANON__[(eval 82)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_395 {
	label="Eval::Closure::Sandbox_395";
	"Eval::Closure::Sandbox_395::__ANON__[(eval 565)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Moose_Meta_Object_Trait {
	label="Moose::Meta::Object::Trait";
	"Moose::Meta::Object::Trait::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_118 {
	label="Eval::Closure::Sandbox_118";
	"Eval::Closure::Sandbox_118::__ANON__[(eval 143)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_289 {
	label="Eval::Closure::Sandbox_289";
	"Eval::Closure::Sandbox_289::__ANON__[(eval 415)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_370 {
	label="Eval::Closure::Sandbox_370";
	"Eval::Closure::Sandbox_370::__ANON__[(eval 513)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Graph_TransitiveClosure_Matrix {
	label="Graph::TransitiveClosure::Matrix";
	"Graph::TransitiveClosure::Matrix::BEGIN@3";
	"Graph::TransitiveClosure::Matrix::BEGIN@5";
	"Graph::TransitiveClosure::Matrix::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_216 {
	label="Eval::Closure::Sandbox_216";
	"Eval::Closure::Sandbox_216::__ANON__[(eval 317)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_410 {
	label="Eval::Closure::Sandbox_410";
	"Eval::Closure::Sandbox_410::__ANON__[(eval 580)[Eval/Closure.pm:125]:192]";
}
subgraph cluster_Eval_Closure_Sandbox_291 {
	label="Eval::Closure::Sandbox_291";
	"Eval::Closure::Sandbox_291::__ANON__[(eval 417)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_223 {
	label="Eval::Closure::Sandbox_223";
	"Eval::Closure::Sandbox_223::__ANON__[(eval 324)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Devel_OverloadInfo {
	label="Devel::OverloadInfo";
	"Devel::OverloadInfo::BEGIN@22";
	"Devel::OverloadInfo::BEGIN@15";
	"Devel::OverloadInfo::BEGIN@19";
	"Devel::OverloadInfo::BEGIN@18";
	"Devel::OverloadInfo::BEGIN@16";
	"Devel::OverloadInfo::BEGIN@14";
	"Devel::OverloadInfo::BEGIN@20";
	"Devel::OverloadInfo::BEGIN@17";
}
subgraph cluster_Class_MOP_Method_Meta {
	label="Class::MOP::Method::Meta";
	"Class::MOP::Method::Meta::BEGIN@12";
	"Class::MOP::Method::Meta::BEGIN@4";
	"Class::MOP::Method::Meta::wrap";
	"Class::MOP::Method::Meta::BEGIN@8";
	"Class::MOP::Method::Meta::BEGIN@7";
	"Class::MOP::Method::Meta::BEGIN@10";
	"Class::MOP::Method::Meta::_generate_meta_method";
	"Class::MOP::Method::Meta::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_98 {
	label="Eval::Closure::Sandbox_98";
	"Eval::Closure::Sandbox_98::__ANON__[(eval 123)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_235 {
	label="Eval::Closure::Sandbox_235";
	"Eval::Closure::Sandbox_235::__ANON__[(eval 352)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_397 {
	label="Eval::Closure::Sandbox_397";
	"Eval::Closure::Sandbox_397::__ANON__[(eval 567)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_380 {
	label="Eval::Closure::Sandbox_380";
	"Eval::Closure::Sandbox_380::__ANON__[(eval 523)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_304 {
	label="Eval::Closure::Sandbox_304";
	"Eval::Closure::Sandbox_304::__ANON__[(eval 447)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_173 {
	label="Eval::Closure::Sandbox_173";
	"Eval::Closure::Sandbox_173::__ANON__[(eval 204)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Eval_Closure_Sandbox_325 {
	label="Eval::Closure::Sandbox_325";
	"Eval::Closure::Sandbox_325::__ANON__[(eval 468)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_Location_Simple {
	label="Bio::Location::Simple";
	"Bio::Location::Simple::BEGIN@85";
	"Bio::Location::Simple::BEGIN@87";
}
subgraph cluster_Devel_GlobalDestruction {
	label="Devel::GlobalDestruction";
	"Devel::GlobalDestruction::BEGIN@8";
	"Devel::GlobalDestruction::BEGIN@3";
	"Devel::GlobalDestruction::BEGIN@4";
	"Devel::GlobalDestruction::BEGIN@23";
}
subgraph cluster_Eval_Closure_Sandbox_361 {
	label="Eval::Closure::Sandbox_361";
	"Eval::Closure::Sandbox_361::__ANON__[(eval 504)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_26 {
	label="Eval::Closure::Sandbox_26";
	"Eval::Closure::Sandbox_26::__ANON__[(eval 50)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Graph_SPTHeapElem {
	label="Graph::SPTHeapElem";
	"Graph::SPTHeapElem::BEGIN@3";
	"Graph::SPTHeapElem::BEGIN@5";
	"Graph::SPTHeapElem::BEGIN@7";
	"Graph::SPTHeapElem::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_145 {
	label="Eval::Closure::Sandbox_145";
	"Eval::Closure::Sandbox_145::__ANON__[(eval 170)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_63 {
	label="Eval::Closure::Sandbox_63";
	"Eval::Closure::Sandbox_63::__ANON__[(eval 87)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Bio_SeqUtils {
	label="Bio::SeqUtils";
	"Bio::SeqUtils::BEGIN@585";
	"Bio::SeqUtils::valid_aa";
	"Bio::SeqUtils::CORE:sort";
	"Bio::SeqUtils::CORE:match";
	"Bio::SeqUtils::BEGIN@192";
	"Bio::SeqUtils::BEGIN@191";
	"Bio::SeqUtils::BEGIN@190";
	"Bio::SeqUtils::BEGIN@189";
}
subgraph cluster_Eval_Closure_Sandbox_62 {
	label="Eval::Closure::Sandbox_62";
	"Eval::Closure::Sandbox_62::__ANON__[(eval 86)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_400 {
	label="Eval::Closure::Sandbox_400";
	"Eval::Closure::Sandbox_400::__ANON__[(eval 570)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Class_MOP_Method_Constructor {
	label="Class::MOP::Method::Constructor";
	"Class::MOP::Method::Constructor::_eval_environment";
	"Class::MOP::Method::Constructor::BEGIN@5";
	"Class::MOP::Method::Constructor::options";
	"Class::MOP::Method::Constructor::BEGIN@10";
	"Class::MOP::Method::Constructor::_new";
	"Class::MOP::Method::Constructor::try {...} ";
	"Class::MOP::Method::Constructor::BEGIN@4";
	"Class::MOP::Method::Constructor::BEGIN@7";
	"Class::MOP::Method::Constructor::_generate_constructor_method_inline";
	"Class::MOP::Method::Constructor::_initialize_body";
	"Class::MOP::Method::Constructor::BEGIN@8";
	"Class::MOP::Method::Constructor::associated_metaclass";
	"Class::MOP::Method::Constructor::new";
}
subgraph cluster_Eval_Closure_Sandbox_214 {
	label="Eval::Closure::Sandbox_214";
	"Eval::Closure::Sandbox_214::__ANON__[(eval 315)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Bio_Factory_SequenceFactoryI {
	label="Bio::Factory::SequenceFactoryI";
	"Bio::Factory::SequenceFactoryI::BEGIN@86";
	"Bio::Factory::SequenceFactoryI::BEGIN@88";
}
subgraph cluster_File_Find_Rule {
	label="File::Find::Rule";
	"File::Find::Rule::BEGIN@9";
	"File::Find::Rule::BEGIN@225";
	"File::Find::Rule::BEGIN@511";
	"File::Find::Rule::BEGIN@6";
	"File::Find::Rule::BEGIN@195";
	"File::Find::Rule::BEGIN@248";
	"File::Find::Rule::BEGIN@5";
	"File::Find::Rule::BEGIN@18";
	"File::Find::Rule::import";
	"File::Find::Rule::BEGIN@268";
	"File::Find::Rule::BEGIN@7";
	"File::Find::Rule::BEGIN@4";
	"File::Find::Rule::BEGIN@471";
	"File::Find::Rule::BEGIN@8";
}
subgraph cluster_Eval_Closure_Sandbox_422 {
	label="Eval::Closure::Sandbox_422";
	"Eval::Closure::Sandbox_422::__ANON__[(eval 592)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_286 {
	label="Eval::Closure::Sandbox_286";
	"Eval::Closure::Sandbox_286::__ANON__[(eval 412)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Moose_Meta_TypeCoercion_Union {
	label="Moose::Meta::TypeCoercion::Union";
	"Moose::Meta::TypeCoercion::Union::BEGIN@6";
	"Moose::Meta::TypeCoercion::Union::BEGIN@10";
	"Moose::Meta::TypeCoercion::Union::BEGIN@8";
	"Moose::Meta::TypeCoercion::Union::meta";
	"Moose::Meta::TypeCoercion::Union::BEGIN@4";
	"Moose::Meta::TypeCoercion::Union::BEGIN@5";
	"Moose::Meta::TypeCoercion::Union::BEGIN@12";
}
subgraph cluster_Eval_Closure_Sandbox_434 {
	label="Eval::Closure::Sandbox_434";
	"Eval::Closure::Sandbox_434::__ANON__[(eval 604)[Eval/Closure.pm:125]:304]";
	"Eval::Closure::Sandbox_434::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_246 {
	label="Eval::Closure::Sandbox_246";
	"Eval::Closure::Sandbox_246::__ANON__[(eval 372)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_SelectSaver {
	label="SelectSaver";
	"SelectSaver::BEGIN@38";
	"SelectSaver::BEGIN@39";
}
subgraph cluster_Eval_Closure_Sandbox_161 {
	label="Eval::Closure::Sandbox_161";
	"Eval::Closure::Sandbox_161::__ANON__[(eval 192)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Eval_Closure_Sandbox_47 {
	label="Eval::Closure::Sandbox_47";
	"Eval::Closure::Sandbox_47::__ANON__[(eval 71)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_150 {
	label="Eval::Closure::Sandbox_150";
	"Eval::Closure::Sandbox_150::__ANON__[(eval 175)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_240 {
	label="Eval::Closure::Sandbox_240";
	"Eval::Closure::Sandbox_240::__ANON__[(eval 357)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_271 {
	label="Eval::Closure::Sandbox_271";
	"Eval::Closure::Sandbox_271::__ANON__[(eval 397)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_193 {
	label="Eval::Closure::Sandbox_193";
	"Eval::Closure::Sandbox_193::__ANON__[(eval 294)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_65 {
	label="Eval::Closure::Sandbox_65";
	"Eval::Closure::Sandbox_65::__ANON__[(eval 89)[Eval/Closure.pm:125]:11]";
}
subgraph cluster_Eval_Closure_Sandbox_122 {
	label="Eval::Closure::Sandbox_122";
	"Eval::Closure::Sandbox_122::__ANON__[(eval 147)[Eval/Closure.pm:125]:31]";
}
subgraph cluster_Eval_Closure_Sandbox_354 {
	label="Eval::Closure::Sandbox_354";
	"Eval::Closure::Sandbox_354::__ANON__[(eval 497)[Eval/Closure.pm:125]:18]";
}
subgraph cluster_Text_CSV_ErrorDiag {
	label="Text::CSV::ErrorDiag";
	"Text::CSV::ErrorDiag::BEGIN@1087";
	"Text::CSV::ErrorDiag::BEGIN@1088";
}
subgraph cluster_Eval_Closure_Sandbox_117 {
	label="Eval::Closure::Sandbox_117";
	"Eval::Closure::Sandbox_117::__ANON__[(eval 142)[Eval/Closure.pm:125]:157]";
}
subgraph cluster_Eval_Closure_Sandbox_348 {
	label="Eval::Closure::Sandbox_348";
	"Eval::Closure::Sandbox_348::__ANON__[(eval 491)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Class_MOP_Attribute {
	label="Class::MOP::Attribute";
	"Class::MOP::Attribute::_inline_clear_value";
	"Class::MOP::Attribute::_inline_has_value";
	"Class::MOP::Attribute::attach_to_class";
	"Class::MOP::Attribute::_new";
	"Class::MOP::Attribute::has_value";
	"Class::MOP::Attribute::associate_method";
	"Class::MOP::Attribute::detach_from_class";
	"Class::MOP::Attribute::BEGIN@10";
	"Class::MOP::Attribute::new";
	"Class::MOP::Attribute::BEGIN@11";
	"Class::MOP::Attribute::_inline_instance_clear";
	"Class::MOP::Attribute::install_accessors";
	"Class::MOP::Attribute::_inline_instance_set";
	"Class::MOP::Attribute::remove_accessors";
	"Class::MOP::Attribute::BEGIN@9";
	"Class::MOP::Attribute::BEGIN@13";
	"Class::MOP::Attribute::_inline_set_value";
	"Class::MOP::Attribute::_inline_instance_get";
	"Class::MOP::Attribute::BEGIN@5";
	"Class::MOP::Attribute::associated_methods";
	"Class::MOP::Attribute::try {...} ";
	"Class::MOP::Attribute::get_value";
	"Class::MOP::Attribute::slots";
	"Class::MOP::Attribute::BEGIN@4";
	"Class::MOP::Attribute::associated_class";
	"Class::MOP::Attribute::BEGIN@7";
	"Class::MOP::Attribute::_inline_instance_has";
	"Class::MOP::Attribute::accessor_metaclass";
	"Class::MOP::Attribute::_set_initial_slot_value";
	"Class::MOP::Attribute::_accessor_description";
	"Class::MOP::Attribute::get_raw_value";
	"Class::MOP::Attribute::_process_accessors";
	"Class::MOP::Attribute::initialize_instance_slot";
	"Class::MOP::Attribute::__ANON__[Class/MOP/Attribute.pm:478]";
	"Class::MOP::Attribute::_inline_get_value";
}
subgraph cluster_Eval_Closure_Sandbox_398 {
	label="Eval::Closure::Sandbox_398";
	"Eval::Closure::Sandbox_398::__ANON__[(eval 568)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Bio_Roary_Output_GroupsMultifastasNucleotide {
	label="Bio::Roary::Output::GroupsMultifastasNucleotide";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::meta";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@22";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@19";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@75";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@20";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@21";
}
subgraph cluster_Class_MOP_MiniTrait {
	label="Class::MOP::MiniTrait";
	"Class::MOP::MiniTrait::BEGIN@4";
	"Class::MOP::MiniTrait::apply";
	"Class::MOP::MiniTrait::BEGIN@5";
	"Class::MOP::MiniTrait::BEGIN@7";
}
subgraph cluster_Eval_Closure_Sandbox_262 {
	label="Eval::Closure::Sandbox_262";
	"Eval::Closure::Sandbox_262::__ANON__[(eval 388)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_27 {
	label="Eval::Closure::Sandbox_27";
	"Eval::Closure::Sandbox_27::__ANON__[(eval 51)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_323 {
	label="Eval::Closure::Sandbox_323";
	"Eval::Closure::Sandbox_323::__ANON__[(eval 466)[Eval/Closure.pm:125]:123]";
}
subgraph cluster_Eval_Closure_Sandbox_279 {
	label="Eval::Closure::Sandbox_279";
	"Eval::Closure::Sandbox_279::__ANON__[(eval 405)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_299 {
	label="Eval::Closure::Sandbox_299";
	"Eval::Closure::Sandbox_299::__ANON__[(eval 442)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_overload {
	label="overload";
	"overload::mycan";
	"overload::OVERLOAD";
	"overload::BEGIN@116";
	"overload::BEGIN@146";
	"overload::import";
	"overload::BEGIN@85";
	"overload::Overloaded";
	"overload::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_138 {
	label="Eval::Closure::Sandbox_138";
	"Eval::Closure::Sandbox_138::__ANON__[(eval 163)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_386 {
	label="Eval::Closure::Sandbox_386";
	"Eval::Closure::Sandbox_386::__ANON__[(eval 529)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Class_MOP_Class_ {
	label="Class::MOP::Class:";
	"Class::MOP::Class:::around";
}
subgraph cluster_Eval_Closure_Sandbox_199 {
	label="Eval::Closure::Sandbox_199";
	"Eval::Closure::Sandbox_199::__ANON__[(eval 300)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Package_DeprecationManager {
	label="Package::DeprecationManager";
	"Package::DeprecationManager::_build_warn";
	"Package::DeprecationManager::import";
	"Package::DeprecationManager::BEGIN@12";
	"Package::DeprecationManager::BEGIN@9";
	"Package::DeprecationManager::BEGIN@11";
	"Package::DeprecationManager::_build_import";
	"Package::DeprecationManager::BEGIN@10";
	"Package::DeprecationManager::BEGIN@6";
	"Package::DeprecationManager::BEGIN@7";
	"Package::DeprecationManager::__ANON__[Package/DeprecationManager.pm:61]";
}
subgraph cluster_Bio_Roary_AnalyseGroups {
	label="Bio::Roary::AnalyseGroups";
	"Bio::Roary::AnalyseGroups::_freq_groups_per_genome";
	"Bio::Roary::AnalyseGroups::CORE:close";
	"Bio::Roary::AnalyseGroups::_groups_to_genes";
	"Bio::Roary::AnalyseGroups::CORE:sort";
	"Bio::Roary::AnalyseGroups::groups_filename";
	"Bio::Roary::AnalyseGroups::_builder__groups_to_genes";
	"Bio::Roary::AnalyseGroups::new";
	"Bio::Roary::AnalyseGroups::CORE:subst";
	"Bio::Roary::AnalyseGroups::_count_num_files_in_group";
	"Bio::Roary::AnalyseGroups::BEGIN@19";
	"Bio::Roary::AnalyseGroups::fasta_files";
	"Bio::Roary::AnalyseGroups::_builder__files_to_genes";
	"Bio::Roary::AnalyseGroups::CORE:match";
	"Bio::Roary::AnalyseGroups::meta";
	"Bio::Roary::AnalyseGroups::_genes_to_groups";
	"Bio::Roary::AnalyseGroups::_files_to_genes";
	"Bio::Roary::AnalyseGroups::DESTROY";
	"Bio::Roary::AnalyseGroups::BEGIN@142";
	"Bio::Roary::AnalyseGroups::_builder__number_of_isolates";
	"Bio::Roary::AnalyseGroups::_genes_to_file";
	"Bio::Roary::AnalyseGroups::BEGIN@20";
	"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome";
	"Bio::Roary::AnalyseGroups::CORE:readline";
	"Bio::Roary::AnalyseGroups::_number_of_isolates";
	"Bio::Roary::AnalyseGroups::CORE:open";
	"Bio::Roary::AnalyseGroups::BUILD";
}
subgraph cluster_Eval_Closure_Sandbox_345 {
	label="Eval::Closure::Sandbox_345";
	"Eval::Closure::Sandbox_345::__ANON__[(eval 488)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_Eval_Closure_Sandbox_355 {
	label="Eval::Closure::Sandbox_355";
	"Eval::Closure::Sandbox_355::__ANON__[(eval 498)[Eval/Closure.pm:125]:18]";
}
subgraph cluster_Eval_Closure_Sandbox_202 {
	label="Eval::Closure::Sandbox_202";
	"Eval::Closure::Sandbox_202::__ANON__[(eval 303)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_57 {
	label="Eval::Closure::Sandbox_57";
	"Eval::Closure::Sandbox_57::__ANON__[(eval 81)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_387 {
	label="Eval::Closure::Sandbox_387";
	"Eval::Closure::Sandbox_387::__ANON__[(eval 530)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Moose_Meta_Role_Method_Required {
	label="Moose::Meta::Role::Method::Required";
	"Moose::Meta::Role::Method::Required::BEGIN@11";
	"Moose::Meta::Role::Method::Required::BEGIN@5";
	"Moose::Meta::Role::Method::Required::BEGIN@4";
	"Moose::Meta::Role::Method::Required::BEGIN@6";
	"Moose::Meta::Role::Method::Required::meta";
	"Moose::Meta::Role::Method::Required::BEGIN@8";
}
subgraph cluster_Eval_Closure_Sandbox_42 {
	label="Eval::Closure::Sandbox_42";
	"Eval::Closure::Sandbox_42::__ANON__[(eval 66)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_313 {
	label="Eval::Closure::Sandbox_313";
	"Eval::Closure::Sandbox_313::__ANON__[(eval 456)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Class_Data_Inheritable {
	label="Class::Data::Inheritable";
	"Class::Data::Inheritable::mk_classdata";
	"Class::Data::Inheritable::BEGIN@3";
	"Class::Data::Inheritable::__ANON__[Class/Data/Inheritable.pm:23]";
	"Class::Data::Inheritable::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_269 {
	label="Eval::Closure::Sandbox_269";
	"Eval::Closure::Sandbox_269::__ANON__[(eval 395)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_419 {
	label="Eval::Closure::Sandbox_419";
	"Eval::Closure::Sandbox_419::__ANON__[(eval 589)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Class_MOP_Mixin_HasAttributes {
	label="Class::MOP::Mixin::HasAttributes";
	"Class::MOP::Mixin::HasAttributes::get_attribute_list";
	"Class::MOP::Mixin::HasAttributes::get_attribute";
	"Class::MOP::Mixin::HasAttributes::BEGIN@9";
	"Class::MOP::Mixin::HasAttributes::_attribute_map";
	"Class::MOP::Mixin::HasAttributes::BEGIN@7";
	"Class::MOP::Mixin::HasAttributes::attribute_metaclass";
	"Class::MOP::Mixin::HasAttributes::BEGIN@4";
	"Class::MOP::Mixin::HasAttributes::remove_attribute";
	"Class::MOP::Mixin::HasAttributes::add_attribute";
	"Class::MOP::Mixin::HasAttributes::BEGIN@5";
	"Class::MOP::Mixin::HasAttributes::has_attribute";
}
subgraph cluster_Eval_Closure_Sandbox_256 {
	label="Eval::Closure::Sandbox_256";
	"Eval::Closure::Sandbox_256::__ANON__[(eval 382)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_261 {
	label="Eval::Closure::Sandbox_261";
	"Eval::Closure::Sandbox_261::__ANON__[(eval 387)[Eval/Closure.pm:125]:39]";
}
subgraph cluster_Bio_Roary_Output_GroupsMultifastaNucleotide {
	label="Bio::Roary::Output::GroupsMultifastaNucleotide";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@19";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@22";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::meta";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@17";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@148";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@20";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18";
	"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@21";
}
subgraph cluster_Moose_Meta_Method_Accessor {
	label="Moose::Meta::Method::Accessor";
	"Moose::Meta::Method::Accessor::BEGIN@12";
	"Moose::Meta::Method::Accessor::new";
	"Moose::Meta::Method::Accessor::BEGIN@7";
	"Moose::Meta::Method::Accessor::_generate_clearer_method";
	"Moose::Meta::Method::Accessor::_generate_reader_method";
	"Moose::Meta::Method::Accessor::_generate_predicate_method";
	"Moose::Meta::Method::Accessor::try {...} ";
	"Moose::Meta::Method::Accessor::_eval_environment";
	"Moose::Meta::Method::Accessor::BEGIN@5";
	"Moose::Meta::Method::Accessor::_compile_code";
	"Moose::Meta::Method::Accessor::_instance_is_inlinable";
	"Moose::Meta::Method::Accessor::_new";
	"Moose::Meta::Method::Accessor::BEGIN@4";
	"Moose::Meta::Method::Accessor::_generate_accessor_method";
	"Moose::Meta::Method::Accessor::BEGIN@9";
}
subgraph cluster_Eval_Closure_Sandbox_130 {
	label="Eval::Closure::Sandbox_130";
	"Eval::Closure::Sandbox_130::__ANON__[(eval 155)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Moose_Meta_TypeConstraint {
	label="Moose::Meta::TypeConstraint";
	"Moose::Meta::TypeConstraint::_inline_check";
	"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:8]";
	"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:10]";
	"Moose::Meta::TypeConstraint::has_message";
	"Moose::Meta::TypeConstraint::_set_constraint";
	"Moose::Meta::TypeConstraint::_has_compiled_type_constraint";
	"Moose::Meta::TypeConstraint::BEGIN@15";
	"Moose::Meta::TypeConstraint::create_child_type";
	"Moose::Meta::TypeConstraint::new";
	"Moose::Meta::TypeConstraint::_inline_environment";
	"Moose::Meta::TypeConstraint::BEGIN@5";
	"Moose::Meta::TypeConstraint::BEGIN@6";
	"Moose::Meta::TypeConstraint::inline_environment";
	"Moose::Meta::TypeConstraint::is_subtype_of";
	"Moose::Meta::TypeConstraint::_new";
	"Moose::Meta::TypeConstraint::_default_message";
	"Moose::Meta::TypeConstraint::can_be_inlined";
	"Moose::Meta::TypeConstraint::BEGIN@13";
	"Moose::Meta::TypeConstraint::compile_type_constraint";
	"Moose::Meta::TypeConstraint::name";
	"Moose::Meta::TypeConstraint::has_parent";
	"Moose::Meta::TypeConstraint::BEGIN@20";
	"Moose::Meta::TypeConstraint::inlined";
	"Moose::Meta::TypeConstraint::BEGIN@16";
	"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
	"Moose::Meta::TypeConstraint::meta";
	"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:72]";
	"Moose::Meta::TypeConstraint::_has_inlined_type_constraint";
	"Moose::Meta::TypeConstraint::_compiled_type_constraint";
	"Moose::Meta::TypeConstraint::BEGIN@8";
	"Moose::Meta::TypeConstraint::equals";
	"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:36]";
	"Moose::Meta::TypeConstraint::_actually_compile_type_constraint";
	"Moose::Meta::TypeConstraint::has_coercion";
	"Moose::Meta::TypeConstraint::parent";
	"Moose::Meta::TypeConstraint::BEGIN@14";
	"Moose::Meta::TypeConstraint::BEGIN@18";
	"Moose::Meta::TypeConstraint::constraint";
	"Moose::Meta::TypeConstraint::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_88 {
	label="Eval::Closure::Sandbox_88";
	"Eval::Closure::Sandbox_88::__ANON__[(eval 113)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Exception_Class {
	label="Exception::Class";
	"Exception::Class::BEGIN@10";
	"Exception::Class::BEGIN@78";
	"Exception::Class::_make_subclass";
	"Exception::Class::import";
	"Exception::Class::BEGIN@5";
	"Exception::Class::BEGIN@45";
	"Exception::Class::BEGIN@13";
	"Exception::Class::BEGIN@7";
	"Exception::Class::CORE:sort";
	"Exception::Class::BEGIN@167";
	"Exception::Class::BEGIN@9";
	"Exception::Class::CORE:subst";
	"Exception::Class::BEGIN@175";
}
subgraph cluster_Eval_Closure_Sandbox_129 {
	label="Eval::Closure::Sandbox_129";
	"Eval::Closure::Sandbox_129::__ANON__[(eval 154)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_186 {
	label="Eval::Closure::Sandbox_186";
	"Eval::Closure::Sandbox_186::__ANON__[(eval 217)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Bio_Root_RootI {
	label="Bio::Root::RootI";
	"Bio::Root::RootI::BEGIN@562";
	"Bio::Root::RootI::BEGIN@84";
	"Bio::Root::RootI::BEGIN@242";
	"Bio::Root::RootI::BEGIN@85";
	"Bio::Root::RootI::BEGIN@2";
	"Bio::Root::RootI::BEGIN@549";
	"Bio::Root::RootI::BEGIN@3";
	"Bio::Root::RootI::BEGIN@227";
}
subgraph cluster_Eval_Closure_Sandbox_339 {
	label="Eval::Closure::Sandbox_339";
	"Eval::Closure::Sandbox_339::__ANON__[(eval 482)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_435 {
	label="Eval::Closure::Sandbox_435";
	"Eval::Closure::Sandbox_435::__ANON__[(eval 605)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_148 {
	label="Eval::Closure::Sandbox_148";
	"Eval::Closure::Sandbox_148::__ANON__[(eval 173)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Class_MOP_Class_Immutable_Trait {
	label="Class::MOP::Class::Immutable::Trait";
	"Class::MOP::Class::Immutable::Trait::BEGIN@7";
	"Class::MOP::Class::Immutable::Trait::BEGIN@29";
	"Class::MOP::Class::Immutable::Trait::BEGIN@4";
	"Class::MOP::Class::Immutable::Trait::_get_mutable_metaclass_name";
	"Class::MOP::Class::Immutable::Trait::BEGIN@8";
	"Class::MOP::Class::Immutable::Trait::BEGIN@5";
	"Class::MOP::Class::Immutable::Trait::BEGIN@39";
}
subgraph cluster_Eval_Closure_Sandbox_99 {
	label="Eval::Closure::Sandbox_99";
	"Eval::Closure::Sandbox_99::__ANON__[(eval 124)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_33 {
	label="Eval::Closure::Sandbox_33";
	"Eval::Closure::Sandbox_33::__ANON__[(eval 57)[Eval/Closure.pm:125]:52]";
}
subgraph cluster_Storable {
	label="Storable";
	"Storable::BEGIN@53";
	"Storable::BEGIN@23";
	"Storable::BEGIN@27";
}
subgraph cluster_Bio_Tools_GuessSeqFormat {
	label="Bio::Tools::GuessSeqFormat";
	"Bio::Tools::GuessSeqFormat::BEGIN@248";
	"Bio::Tools::GuessSeqFormat::BEGIN@247";
	"Bio::Tools::GuessSeqFormat::BEGIN@251";
}
subgraph cluster_Eval_Closure_Sandbox_277 {
	label="Eval::Closure::Sandbox_277";
	"Eval::Closure::Sandbox_277::__ANON__[(eval 403)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Symbol {
	label="Symbol";
	"Symbol::BEGIN@81";
}
subgraph cluster_Eval_Closure_Sandbox_222 {
	label="Eval::Closure::Sandbox_222";
	"Eval::Closure::Sandbox_222::__ANON__[(eval 323)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_if {
	label="if";
	"if::CORE:subst";
	"if::import";
	"if::work";
}
subgraph cluster_Eval_Closure_Sandbox_171 {
	label="Eval::Closure::Sandbox_171";
	"Eval::Closure::Sandbox_171::__ANON__[(eval 202)[Eval/Closure.pm:125]:26]";
	"Eval::Closure::Sandbox_171::CORE:match";
}
subgraph cluster_Eval_Closure_Sandbox_254 {
	label="Eval::Closure::Sandbox_254";
	"Eval::Closure::Sandbox_254::__ANON__[(eval 380)[Eval/Closure.pm:125]:111]";
}
subgraph cluster_List_MoreUtils {
	label="List::MoreUtils";
	"List::MoreUtils::BEGIN@6";
	"List::MoreUtils::BEGIN@8";
	"List::MoreUtils::bootstrap";
	"List::MoreUtils::BEGIN@4";
	"List::MoreUtils::BEGIN@3";
	"List::MoreUtils::uniq";
	"List::MoreUtils::BEGIN@5";
	"List::MoreUtils::firstidx";
	"List::MoreUtils::BEGIN@9";
}
subgraph cluster_Eval_Closure_Sandbox_308 {
	label="Eval::Closure::Sandbox_308";
	"Eval::Closure::Sandbox_308::__ANON__[(eval 451)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_194 {
	label="Eval::Closure::Sandbox_194";
	"Eval::Closure::Sandbox_194::__ANON__[(eval 295)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_warnings {
	label="warnings";
	"warnings::unimport";
	"warnings::CORE:regcomp";
	"warnings::register_categories";
	"warnings::_mkMask";
	"warnings::CORE:match";
	"warnings::import";
}
subgraph cluster_Eval_Closure_Sandbox_310 {
	label="Eval::Closure::Sandbox_310";
	"Eval::Closure::Sandbox_310::__ANON__[(eval 453)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_215 {
	label="Eval::Closure::Sandbox_215";
	"Eval::Closure::Sandbox_215::__ANON__[(eval 316)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_324 {
	label="Eval::Closure::Sandbox_324";
	"Eval::Closure::Sandbox_324::__ANON__[(eval 467)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_vars {
	label="vars";
	"vars::BEGIN@3";
	"vars::BEGIN@8";
	"vars::import";
	"vars::CORE:match";
	"vars::BEGIN@7";
}
subgraph cluster_Eval_Closure_Sandbox_317 {
	label="Eval::Closure::Sandbox_317";
	"Eval::Closure::Sandbox_317::__ANON__[(eval 460)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Tie_Hash {
	label="Tie::Hash";
	"Tie::Hash::BEGIN@189";
	"Tie::Hash::BEGIN@188";
}
subgraph cluster_Bio_SeqIO {
	label="Bio::SeqIO";
	"Bio::SeqIO::BEGIN@333";
	"Bio::SeqIO::BEGIN@328";
	"Bio::SeqIO::BEGIN@330";
	"Bio::SeqIO::BEGIN@335";
	"Bio::SeqIO::BEGIN@332";
	"Bio::SeqIO::BEGIN@327";
	"Bio::SeqIO::BEGIN@331";
}
subgraph cluster_Moose_Exporter {
	label="Moose::Exporter";
	"Moose::Exporter::__ANON__[Moose/Exporter.pm:39]";
	"Moose::Exporter::BEGIN@331";
	"Moose::Exporter::import";
	"Moose::Exporter::BEGIN@136";
	"Moose::Exporter::_strip_metaclass";
	"Moose::Exporter::_parse_trait_aliases";
	"Moose::Exporter::BEGIN@15";
	"Moose::Exporter::BEGIN@9";
	"Moose::Exporter::BEGIN@4";
	"Moose::Exporter::_make_import_sub";
	"Moose::Exporter::__ANON__[Moose/Exporter.pm:140]";
	"Moose::Exporter::setup_import_methods";
	"Moose::Exporter::BEGIN@725";
	"Moose::Exporter::_sub_from_package";
	"Moose::Exporter::BEGIN@11";
	"Moose::Exporter::_die_if_also_list_cycles_back_to_existing_stack";
	"Moose::Exporter::_die_if_cycle_found_in_also_list_for_package";
	"Moose::Exporter::BEGIN@12";
	"Moose::Exporter::BEGIN@8";
	"Moose::Exporter::_flag_as_reexport";
	"Moose::Exporter::_follow_also";
	"Moose::Exporter::_make_exporter";
	"Moose::Exporter::BEGIN@735";
	"Moose::Exporter::BEGIN@13";
	"Moose::Exporter::_export_is_flagged";
	"Moose::Exporter::BEGIN@5";
	"Moose::Exporter::CORE:match";
	"Moose::Exporter::_make_wrapped_sub_with_meta";
	"Moose::Exporter::_late_curry_wrapper";
	"Moose::Exporter::_remove_keywords";
	"Moose::Exporter::__ANON__[Moose/Exporter.pm:317]";
	"Moose::Exporter::BEGIN@7";
	"Moose::Exporter::__ANON__[Moose/Exporter.pm:389]";
	"Moose::Exporter::_make_unimport_sub";
	"Moose::Exporter::_make_sub_exporter_params";
	"Moose::Exporter::_get_caller";
	"Moose::Exporter::_follow_also_real";
	"Moose::Exporter::_collect_metaroles";
	"Moose::Exporter::BEGIN@135";
	"Moose::Exporter::build_import_methods";
	"Moose::Exporter::_make_init_meta";
	"Moose::Exporter::BEGIN@10";
	"Moose::Exporter::_strip_meta_name";
	"Moose::Exporter::_also_list_for_package";
	"Moose::Exporter::_apply_metaroles";
	"Moose::Exporter::_strip_traits";
	"Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
}
subgraph cluster_Eval_Closure_Sandbox_373 {
	label="Eval::Closure::Sandbox_373";
	"Eval::Closure::Sandbox_373::__ANON__[(eval 516)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_366 {
	label="Eval::Closure::Sandbox_366";
	"Eval::Closure::Sandbox_366::__ANON__[(eval 509)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_357 {
	label="Eval::Closure::Sandbox_357";
	"Eval::Closure::Sandbox_357::__ANON__[(eval 500)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_111 {
	label="Eval::Closure::Sandbox_111";
	"Eval::Closure::Sandbox_111::__ANON__[(eval 136)[Eval/Closure.pm:125]:19]";
}
subgraph cluster_Eval_Closure_Sandbox_360 {
	label="Eval::Closure::Sandbox_360";
	"Eval::Closure::Sandbox_360::__ANON__[(eval 503)[Eval/Closure.pm:125]:18]";
}
subgraph cluster_XSLoader {
	label="XSLoader";
	"XSLoader::load";
}
subgraph cluster_IO_Handle {
	label="IO::Handle";
	"IO::Handle::BEGIN@260";
	"IO::Handle::print";
	"IO::Handle::BEGIN@266";
	"IO::Handle::_create_getline_subs";
	"IO::Handle::BEGIN@263";
	"IO::Handle::BEGIN@628";
	"IO::Handle::BEGIN@264";
	"IO::Handle::CORE:print";
	"IO::Handle::BEGIN@261";
	"IO::Handle::BEGIN@265";
}
subgraph cluster_Moose_Meta_Role {
	label="Moose::Meta::Role";
	"Moose::Meta::Role::_new";
	"Moose::Meta::Role::get_required_methods_map";
	"Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:351]";
	"Moose::Meta::Role::initialize";
	"Moose::Meta::Role::BEGIN@16";
	"Moose::Meta::Role::get_method_modifier_list";
	"Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:398]";
	"Moose::Meta::Role::BEGIN@5";
	"Moose::Meta::Role::applied_attribute_metaclass";
	"Moose::Meta::Role::add_attribute";
	"Moose::Meta::Role::BEGIN@4";
	"Moose::Meta::Role::method_metaclass";
	"Moose::Meta::Role::get_excluded_roles_list";
	"Moose::Meta::Role::BEGIN@8";
	"Moose::Meta::Role::BEGIN@19";
	"Moose::Meta::Role::get_excluded_roles_map";
	"Moose::Meta::Role::find_method_by_name";
	"Moose::Meta::Role::BEGIN@14";
	"Moose::Meta::Role::BEGIN@13";
	"Moose::Meta::Role::get_after_method_modifiers_map";
	"Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:305]";
	"Moose::Meta::Role::get_override_method_modifiers_map";
	"Moose::Meta::Role::BEGIN@11";
	"Moose::Meta::Role::BEGIN@10";
	"Moose::Meta::Role::_meta_method_class";
	"Moose::Meta::Role::BEGIN@17";
	"Moose::Meta::Role::get_required_method_list";
	"Moose::Meta::Role::BEGIN@12";
	"Moose::Meta::Role::application_to_class_class";
	"Moose::Meta::Role::CORE:match";
	"Moose::Meta::Role::meta";
	"Moose::Meta::Role::apply";
	"Moose::Meta::Role::get_before_method_modifiers_map";
	"Moose::Meta::Role::BEGIN@6";
	"Moose::Meta::Role::BEGIN@15";
	"Moose::Meta::Role::get_around_method_modifiers_map";
	"Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:84]";
	"Moose::Meta::Role::_attach_attribute";
}
subgraph cluster_Eval_Closure_Sandbox_405 {
	label="Eval::Closure::Sandbox_405";
	"Eval::Closure::Sandbox_405::__ANON__[(eval 575)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_276 {
	label="Eval::Closure::Sandbox_276";
	"Eval::Closure::Sandbox_276::__ANON__[(eval 402)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Moose_Util_TypeConstraints {
	label="Moose::Util::TypeConstraints";
	"Moose::Util::TypeConstraints::role_type";
	"Moose::Util::TypeConstraints::BEGIN@28";
	"Moose::Util::TypeConstraints::BEGIN@25";
	"Moose::Util::TypeConstraints::BEGIN@27";
	"Moose::Util::TypeConstraints::BEGIN@674";
	"Moose::Util::TypeConstraints::BEGIN@6";
	"Moose::Util::TypeConstraints::CORE:match";
	"Moose::Util::TypeConstraints::inline_as";
	"Moose::Util::TypeConstraints::subtype";
	"Moose::Util::TypeConstraints::BEGIN@4";
	"Moose::Util::TypeConstraints::list_all_type_constraints";
	"Moose::Util::TypeConstraints::BEGIN@30";
	"Moose::Util::TypeConstraints::BEGIN@36";
	"Moose::Util::TypeConstraints::_parse_parameterized_type_constraint";
	"Moose::Util::TypeConstraints::find_or_parse_type_constraint";
	"Moose::Util::TypeConstraints::where";
	"Moose::Util::TypeConstraints::as";
	"Moose::Util::TypeConstraints::CORE:subst";
	"Moose::Util::TypeConstraints::create_parameterized_type_constraint";
	"Moose::Util::TypeConstraints::find_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@24";
	"Moose::Util::TypeConstraints::BEGIN@32";
	"Moose::Util::TypeConstraints::BEGIN@699";
	"Moose::Util::TypeConstraints::type";
	"Moose::Util::TypeConstraints::_detect_type_constraint_union";
	"Moose::Util::TypeConstraints::BEGIN@7";
	"Moose::Util::TypeConstraints::class_type";
	"Moose::Util::TypeConstraints::find_or_create_isa_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@621";
	"Moose::Util::TypeConstraints::create_class_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@685";
	"Moose::Util::TypeConstraints::CORE:qr";
	"Moose::Util::TypeConstraints::CORE:regcomp";
	"Moose::Util::TypeConstraints::_detect_parameterized_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@5";
	"Moose::Util::TypeConstraints::_create_parameterized_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@62";
	"Moose::Util::TypeConstraints::_create_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@33";
	"Moose::Util::TypeConstraints::create_role_type_constraint";
	"Moose::Util::TypeConstraints::BEGIN@34";
	"Moose::Util::TypeConstraints::get_all_parameterizable_types";
	"Moose::Util::TypeConstraints::import";
	"Moose::Util::TypeConstraints::BEGIN@680";
	"Moose::Util::TypeConstraints::BEGIN@26";
	"Moose::Util::TypeConstraints::BEGIN@29";
	"Moose::Util::TypeConstraints::normalize_type_constraint_name";
	"Moose::Util::TypeConstraints::BEGIN@31";
}
subgraph cluster_Class_MOP_Method_Inlined {
	label="Class::MOP::Method::Inlined";
	"Class::MOP::Method::Inlined::BEGIN@9";
	"Class::MOP::Method::Inlined::_expected_method_class";
	"Class::MOP::Method::Inlined::BEGIN@4";
	"Class::MOP::Method::Inlined::BEGIN@5";
	"Class::MOP::Method::Inlined::can_be_inlined";
	"Class::MOP::Method::Inlined::BEGIN@7";
}
subgraph cluster_Eval_Closure_Sandbox_425 {
	label="Eval::Closure::Sandbox_425";
	"Eval::Closure::Sandbox_425::__ANON__[(eval 595)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_162 {
	label="Eval::Closure::Sandbox_162";
	"Eval::Closure::Sandbox_162::__ANON__[(eval 193)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_264 {
	label="Eval::Closure::Sandbox_264";
	"Eval::Closure::Sandbox_264::__ANON__[(eval 390)[Eval/Closure.pm:125]:21]";
}
subgraph cluster_Eval_Closure_Sandbox_376 {
	label="Eval::Closure::Sandbox_376";
	"Eval::Closure::Sandbox_376::__ANON__[(eval 519)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Moose_Meta_Method_Augmented {
	label="Moose::Meta::Method::Augmented";
	"Moose::Meta::Method::Augmented::BEGIN@4";
	"Moose::Meta::Method::Augmented::BEGIN@9";
	"Moose::Meta::Method::Augmented::BEGIN@7";
	"Moose::Meta::Method::Augmented::BEGIN@5";
}
subgraph cluster_Eval_Closure_Sandbox_34 {
	label="Eval::Closure::Sandbox_34";
	"Eval::Closure::Sandbox_34::__ANON__[(eval 58)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Carp {
	label="Carp";
	"Carp::BEGIN@4";
	"Carp::BEGIN@555";
	"Carp::short_error_loc";
	"Carp::croak";
	"Carp::BEGIN@49";
	"Carp::shortmess";
	"Carp::trusts";
	"Carp::trusts_directly";
	"Carp::BEGIN@171";
	"Carp::format_arg";
	"Carp::BEGIN@568";
	"Carp::BEGIN@3";
	"Carp::CORE:subst";
	"Carp::BEGIN@575";
	"Carp::shortmess_heavy";
	"Carp::ret_summary";
	"Carp::BEGIN@131";
	"Carp::CORE:match";
	"Carp::BEGIN@73";
	"Carp::get_status";
	"Carp::BEGIN@5";
	"Carp::caller_info";
	"Carp::_fetch_sub";
	"Carp::BEGIN@6";
	"Carp::_cgc";
	"Carp::get_subname";
	"Carp::BEGIN@61";
}
subgraph cluster_Sub_Install {
	label="Sub::Install";
	"Sub::Install::BEGIN@148";
	"Sub::Install::_installer";
	"Sub::Install::BEGIN@3";
	"Sub::Install::BEGIN@6";
	"Sub::Install::BEGIN@184";
	"Sub::Install::BEGIN@139";
	"Sub::Install::_CODELIKE";
	"Sub::Install::__ANON__[Sub/Install.pm:132]";
	"Sub::Install::__ANON__[Sub/Install.pm:176]";
	"Sub::Install::exporter";
	"Sub::Install::__ANON__[Sub/Install.pm:187]";
	"Sub::Install::CORE:qr";
	"Sub::Install::BEGIN@4";
	"Sub::Install::__ANON__[Sub/Install.pm:175]";
	"Sub::Install::_build_public_installer";
	"Sub::Install::__ANON__[Sub/Install.pm:284]";
	"Sub::Install::BEGIN@287";
	"Sub::Install::_do_with_warn";
	"Sub::Install::BEGIN@190";
	"Sub::Install::BEGIN@7";
}
subgraph cluster_Eval_Closure_Sandbox_141 {
	label="Eval::Closure::Sandbox_141";
	"Eval::Closure::Sandbox_141::__ANON__[(eval 166)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_178 {
	label="Eval::Closure::Sandbox_178";
	"Eval::Closure::Sandbox_178::__ANON__[(eval 209)[Eval/Closure.pm:125]:123]";
}
subgraph cluster_Eval_Closure_Sandbox_403 {
	label="Eval::Closure::Sandbox_403";
	"Eval::Closure::Sandbox_403::__ANON__[(eval 573)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_372 {
	label="Eval::Closure::Sandbox_372";
	"Eval::Closure::Sandbox_372::__ANON__[(eval 515)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_337 {
	label="Eval::Closure::Sandbox_337";
	"Eval::Closure::Sandbox_337::__ANON__[(eval 480)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_IO_Seekable {
	label="IO::Seekable";
	"IO::Seekable::BEGIN@98";
	"IO::Seekable::BEGIN@99";
	"IO::Seekable::BEGIN@97";
	"IO::Seekable::BEGIN@104";
	"IO::Seekable::BEGIN@101";
}
subgraph cluster_Eval_Closure_Sandbox_290 {
	label="Eval::Closure::Sandbox_290";
	"Eval::Closure::Sandbox_290::__ANON__[(eval 416)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Error_subs {
	label="Error::subs";
	"Error::subs::BEGIN@299";
	"Error::subs::BEGIN@298";
}
subgraph cluster_Eval_Closure_Sandbox_203 {
	label="Eval::Closure::Sandbox_203";
	"Eval::Closure::Sandbox_203::__ANON__[(eval 304)[Eval/Closure.pm:125]:98]";
}
subgraph cluster_Text_CSV {
	label="Text::CSV";
	"Text::CSV::BEGIN@6";
	"Text::CSV::_load_pp";
	"Text::CSV::_load_xs";
	"Text::CSV::_set_methods";
	"Text::CSV::CORE:subst";
	"Text::CSV::CORE:match";
	"Text::CSV::BEGIN@137";
	"Text::CSV::import";
	"Text::CSV::AUTOLOAD";
	"Text::CSV::BEGIN@5";
	"Text::CSV::BEGIN@8";
	"Text::CSV::BEGIN@4";
	"Text::CSV::new";
	"Text::CSV::BEGIN@1";
	"Text::CSV::BEGIN@197";
}
subgraph cluster_Bio_Location_WidestCoordPolicy {
	label="Bio::Location::WidestCoordPolicy";
	"Bio::Location::WidestCoordPolicy::BEGIN@77";
	"Bio::Location::WidestCoordPolicy::new";
	"Bio::Location::WidestCoordPolicy::BEGIN@80";
}
subgraph cluster_Eval_Closure_Sandbox_72 {
	label="Eval::Closure::Sandbox_72";
	"Eval::Closure::Sandbox_72::__ANON__[(eval 97)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_125 {
	label="Eval::Closure::Sandbox_125";
	"Eval::Closure::Sandbox_125::__ANON__[(eval 150)[Eval/Closure.pm:125]:31]";
}
subgraph cluster_Eval_Closure_Sandbox_15 {
	label="Eval::Closure::Sandbox_15";
	"Eval::Closure::Sandbox_15::__ANON__[(eval 39)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_60 {
	label="Eval::Closure::Sandbox_60";
	"Eval::Closure::Sandbox_60::__ANON__[(eval 84)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Getopt_Long_CallBack {
	label="Getopt::Long::CallBack";
	"Getopt::Long::CallBack::BEGIN@1544";
}
subgraph cluster_Eval_Closure_Sandbox_333 {
	label="Eval::Closure::Sandbox_333";
	"Eval::Closure::Sandbox_333::__ANON__[(eval 476)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Data_Dumper {
	label="Data::Dumper";
	"Data::Dumper::BEGIN@12";
	"Data::Dumper::_vstring";
	"Data::Dumper::BEGIN@22";
	"Data::Dumper::BEGIN@24";
	"Data::Dumper::BEGIN@18";
	"Data::Dumper::BEGIN@731";
	"Data::Dumper::BEGIN@272";
}
subgraph cluster_Eval_Closure_Sandbox_5 {
	label="Eval::Closure::Sandbox_5";
	"Eval::Closure::Sandbox_5::__ANON__[(eval 29)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_399 {
	label="Eval::Closure::Sandbox_399";
	"Eval::Closure::Sandbox_399::__ANON__[(eval 569)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_282 {
	label="Eval::Closure::Sandbox_282";
	"Eval::Closure::Sandbox_282::__ANON__[(eval 408)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_116 {
	label="Eval::Closure::Sandbox_116";
	"Eval::Closure::Sandbox_116::__ANON__[(eval 141)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_369 {
	label="Eval::Closure::Sandbox_369";
	"Eval::Closure::Sandbox_369::__ANON__[(eval 512)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_18 {
	label="Eval::Closure::Sandbox_18";
	"Eval::Closure::Sandbox_18::__ANON__[(eval 42)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_SeqFeatureI {
	label="Bio::SeqFeatureI";
	"Bio::SeqFeatureI::BEGIN@109";
	"Bio::SeqFeatureI::BEGIN@97";
	"Bio::SeqFeatureI::BEGIN@99";
	"Bio::SeqFeatureI::BEGIN@98";
	"Bio::SeqFeatureI::BEGIN@105";
	"Bio::SeqFeatureI::BEGIN@107";
}
subgraph cluster_Text_CSV_PP {
	label="Text::CSV_PP";
	"Text::CSV_PP::BEGIN@10";
	"Text::CSV_PP::_check_sanity";
	"Text::CSV_PP::CORE:match";
	"Text::CSV_PP::CORE:subst";
	"Text::CSV_PP::print";
	"Text::CSV_PP::BEGIN@114";
	"Text::CSV_PP::BEGIN@12";
	"Text::CSV_PP::BEGIN@970";
	"Text::CSV_PP::types";
	"Text::CSV_PP::BEGIN@111";
	"Text::CSV_PP::new";
	"Text::CSV_PP::CORE:regcomp";
	"Text::CSV_PP::BEGIN@328";
	"Text::CSV_PP::_combine";
	"Text::CSV_PP::CORE:qr";
	"Text::CSV_PP::BEGIN@11";
	"Text::CSV_PP::BEGIN@119";
	"Text::CSV_PP::_string";
}
subgraph cluster_Eval_Closure_Sandbox_134 {
	label="Eval::Closure::Sandbox_134";
	"Eval::Closure::Sandbox_134::__ANON__[(eval 159)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_371 {
	label="Eval::Closure::Sandbox_371";
	"Eval::Closure::Sandbox_371::__ANON__[(eval 514)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_415 {
	label="Eval::Closure::Sandbox_415";
	"Eval::Closure::Sandbox_415::__ANON__[(eval 585)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_File_Temp_Dir {
	label="File::Temp::Dir";
	"File::Temp::Dir::DESTROY";
	"File::Temp::Dir::dirname";
	"File::Temp::Dir::STRINGIFY";
	"File::Temp::Dir::BEGIN@1576";
	"File::Temp::Dir::unlink_on_destroy";
	"File::Temp::Dir::CORE:ftdir";
	"File::Temp::Dir::BEGIN@1575";
	"File::Temp::Dir::BEGIN@1574";
}
subgraph cluster_Bio_Location_Atomic {
	label="Bio::Location::Atomic";
	"Bio::Location::Atomic::BEGIN@81";
	"Bio::Location::Atomic::BEGIN@79";
	"Bio::Location::Atomic::BEGIN@77";
}
subgraph cluster_Eval_Closure_Sandbox_113 {
	label="Eval::Closure::Sandbox_113";
	"Eval::Closure::Sandbox_113::__ANON__[(eval 138)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_131 {
	label="Eval::Closure::Sandbox_131";
	"Eval::Closure::Sandbox_131::__ANON__[(eval 156)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Bio_Factory_ObjectFactoryI {
	label="Bio::Factory::ObjectFactoryI";
	"Bio::Factory::ObjectFactoryI::BEGIN@77";
	"Bio::Factory::ObjectFactoryI::BEGIN@80";
	"Bio::Factory::ObjectFactoryI::BEGIN@78";
}
subgraph cluster_Eval_Closure_Sandbox_24 {
	label="Eval::Closure::Sandbox_24";
	"Eval::Closure::Sandbox_24::__ANON__[(eval 48)[Eval/Closure.pm:125]:55]";
}
subgraph cluster_Eval_Closure_Sandbox_1 {
	label="Eval::Closure::Sandbox_1";
	"Eval::Closure::Sandbox_1::__ANON__[(eval 25)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_346 {
	label="Eval::Closure::Sandbox_346";
	"Eval::Closure::Sandbox_346::__ANON__[(eval 489)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_overloading {
	label="overloading";
	"overloading::BEGIN@2";
	"overloading::unimport";
}
subgraph cluster_Eval_Closure_Sandbox_182 {
	label="Eval::Closure::Sandbox_182";
	"Eval::Closure::Sandbox_182::__ANON__[(eval 213)[Eval/Closure.pm:125]:12]";
}
subgraph cluster_Eval_Closure_Sandbox_103 {
	label="Eval::Closure::Sandbox_103";
	"Eval::Closure::Sandbox_103::__ANON__[(eval 128)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_warnings_register {
	label="warnings::register";
	"warnings::register::import";
}
subgraph cluster_Eval_Closure_Sandbox_429 {
	label="Eval::Closure::Sandbox_429";
	"Eval::Closure::Sandbox_429::__ANON__[(eval 599)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Cwd {
	label="Cwd";
	"Cwd::BEGIN@170";
	"Cwd::CORE:fteexec";
	"Cwd::BEGIN@171";
	"Cwd::getcwd";
	"Cwd::BEGIN@209";
	"Cwd::CORE:match";
	"Cwd::BEGIN@842";
	"Cwd::CORE:regcomp";
	"Cwd::BEGIN@172";
	"Cwd::bootstrap";
	"Cwd::abs_path";
}
subgraph cluster_Class_MOP_Mixin {
	label="Class::MOP::Mixin";
	"Class::MOP::Mixin::BEGIN@7";
	"Class::MOP::Mixin::BEGIN@4";
	"Class::MOP::Mixin::meta";
	"Class::MOP::Mixin::BEGIN@8";
	"Class::MOP::Mixin::BEGIN@5";
}
subgraph cluster_Bio_Seq_SeqFactory {
	label="Bio::Seq::SeqFactory";
	"Bio::Seq::SeqFactory::BEGIN@83";
	"Bio::Seq::SeqFactory::BEGIN@80";
}
subgraph cluster_Class_MOP_Mixin_HasOverloads {
	label="Class::MOP::Mixin::HasOverloads";
	"Class::MOP::Mixin::HasOverloads::BEGIN@15";
	"Class::MOP::Mixin::HasOverloads::BEGIN@10";
	"Class::MOP::Mixin::HasOverloads::BEGIN@9";
	"Class::MOP::Mixin::HasOverloads::BEGIN@13";
	"Class::MOP::Mixin::HasOverloads::BEGIN@11";
	"Class::MOP::Mixin::HasOverloads::BEGIN@7";
	"Class::MOP::Mixin::HasOverloads::is_overloaded";
	"Class::MOP::Mixin::HasOverloads::BEGIN@4";
	"Class::MOP::Mixin::HasOverloads::BEGIN@5";
	"Class::MOP::Mixin::HasOverloads::BEGIN@50";
}
subgraph cluster_Eval_Closure_Sandbox_307 {
	label="Eval::Closure::Sandbox_307";
	"Eval::Closure::Sandbox_307::__ANON__[(eval 450)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Class_MOP_Method_Accessor {
	label="Class::MOP::Method::Accessor";
	"Class::MOP::Method::Accessor::BEGIN@7";
	"Class::MOP::Method::Accessor::_new";
	"Class::MOP::Method::Accessor::_generate_clearer_method_inline";
	"Class::MOP::Method::Accessor::_initialize_body";
	"Class::MOP::Method::Accessor::BEGIN@5";
	"Class::MOP::Method::Accessor::_generate_reader_method";
	"Class::MOP::Method::Accessor::BEGIN@8";
	"Class::MOP::Method::Accessor::associated_attribute";
	"Class::MOP::Method::Accessor::_generate_clearer_method";
	"Class::MOP::Method::Accessor::BEGIN@10";
	"Class::MOP::Method::Accessor::_generate_accessor_method_inline";
	"Class::MOP::Method::Accessor::_generate_writer_method_inline";
	"Class::MOP::Method::Accessor::_generate_predicate_method";
	"Class::MOP::Method::Accessor::_generate_accessor_method";
	"Class::MOP::Method::Accessor::accessor_type";
	"Class::MOP::Method::Accessor::try {...} ";
	"Class::MOP::Method::Accessor::_generate_reader_method_inline";
	"Class::MOP::Method::Accessor::_generate_writer_method";
	"Class::MOP::Method::Accessor::BEGIN@4";
	"Class::MOP::Method::Accessor::new";
	"Class::MOP::Method::Accessor::_generate_predicate_method_inline";
	"Class::MOP::Method::Accessor::_inline_throw_exception";
}
subgraph cluster_Internals {
	label="Internals";
	"Internals::SvREADONLY";
}
subgraph cluster_Sub_Exporter {
	label="Sub::Exporter";
	"Sub::Exporter::_expand_group";
	"Sub::Exporter::BEGIN@217";
	"Sub::Exporter::BEGIN@10";
	"Sub::Exporter::BEGIN@13";
	"Sub::Exporter::_collect_collections";
	"Sub::Exporter::default_generator";
	"Sub::Exporter::build_exporter";
	"Sub::Exporter::_do_import";
	"Sub::Exporter::_expand_groups";
	"Sub::Exporter::__ANON__[Sub/Exporter.pm:460]";
	"Sub::Exporter::BEGIN@12";
	"Sub::Exporter::default_installer";
	"Sub::Exporter::__ANON__[Sub/Exporter.pm:337]";
	"Sub::Exporter::_assert_collector_names_ok";
	"Sub::Exporter::setup_exporter";
	"Sub::Exporter::_key_intersection";
	"Sub::Exporter::CORE:match";
	"Sub::Exporter::_rewrite_build_config";
	"Sub::Exporter::BEGIN@11";
	"Sub::Exporter::_mk_collection_builder";
	"Sub::Exporter::__ANON__[Sub/Exporter.pm:159]";
	"Sub::Exporter::_group_name";
	"Sub::Exporter::_setup";
}
subgraph cluster_Moose_Meta_TypeConstraint_Parameterizable {
	label="Moose::Meta::TypeConstraint::Parameterizable";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@5";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@9";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@8";
	"Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@10";
	"Moose::Meta::TypeConstraint::Parameterizable::has_constraint_generator";
	"Moose::Meta::TypeConstraint::Parameterizable::_parse_type_parameter";
	"Moose::Meta::TypeConstraint::Parameterizable::has_inline_generator";
	"Moose::Meta::TypeConstraint::Parameterizable::inline_generator";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@4";
	"Moose::Meta::TypeConstraint::Parameterizable::constraint_generator";
	"Moose::Meta::TypeConstraint::Parameterizable::meta";
	"Moose::Meta::TypeConstraint::Parameterizable::parameterize";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@12";
	"Moose::Meta::TypeConstraint::Parameterizable::generate_inline_for";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@14";
	"Moose::Meta::TypeConstraint::Parameterizable::_new";
	"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@6";
}
subgraph cluster_Eval_Closure_Sandbox_311 {
	label="Eval::Closure::Sandbox_311";
	"Eval::Closure::Sandbox_311::__ANON__[(eval 454)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Graph_MSTHeapElem {
	label="Graph::MSTHeapElem";
	"Graph::MSTHeapElem::BEGIN@4";
	"Graph::MSTHeapElem::BEGIN@5";
	"Graph::MSTHeapElem::BEGIN@3";
	"Graph::MSTHeapElem::BEGIN@7";
	"Graph::MSTHeapElem::val";
	"Graph::MSTHeapElem::new";
	"Graph::MSTHeapElem::cmp";
}
subgraph cluster_Eval_Closure_Sandbox_382 {
	label="Eval::Closure::Sandbox_382";
	"Eval::Closure::Sandbox_382::__ANON__[(eval 525)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Class_MOP_Object {
	label="Class::MOP::Object";
	"Class::MOP::Object::_new";
	"Class::MOP::Object::BEGIN@7";
	"Class::MOP::Object::meta";
	"Class::MOP::Object::BEGIN@9";
	"Class::MOP::Object::BEGIN@4";
	"Class::MOP::Object::_can_be_made_compatible_with";
	"Class::MOP::Object::BEGIN@5";
	"Class::MOP::Object::BEGIN@8";
	"Class::MOP::Object::_is_compatible_with";
}
subgraph cluster_Class_Load_XS {
	label="Class::Load::XS";
	"Class::Load::XS::is_class_loaded";
	"Class::Load::XS::BEGIN@6";
	"Class::Load::XS::BEGIN@11";
	"Class::Load::XS::BEGIN@7";
	"Class::Load::XS::BEGIN@9";
}
subgraph cluster_Eval_Closure_Sandbox_374 {
	label="Eval::Closure::Sandbox_374";
	"Eval::Closure::Sandbox_374::__ANON__[(eval 517)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_100 {
	label="Eval::Closure::Sandbox_100";
	"Eval::Closure::Sandbox_100::__ANON__[(eval 125)[Eval/Closure.pm:125]:139]";
}
subgraph cluster_Graph_UnionFind {
	label="Graph::UnionFind";
	"Graph::UnionFind::BEGIN@3";
}
subgraph cluster_strict {
	label="strict";
	"strict::unimport";
	"strict::CORE:regcomp";
	"strict::import";
	"strict::CORE:match";
	"strict::bits";
}
subgraph cluster_Moose_Util {
	label="Moose::Util";
	"Moose::Util::BEGIN@11";
	"Moose::Util::BEGIN@13";
	"Moose::Util::BEGIN@12";
	"Moose::Util::BEGIN@14";
	"Moose::Util::BEGIN@10";
	"Moose::Util::_apply_all_roles";
	"Moose::Util::_caller_info";
	"Moose::Util::find_meta";
	"Moose::Util::BEGIN@8";
	"Moose::Util::apply_all_roles";
	"Moose::Util::BEGIN@7";
	"Moose::Util::_load_user_class";
	"Moose::Util::BEGIN@9";
	"Moose::Util::BEGIN@5";
	"Moose::Util::add_method_modifier";
	"Moose::Util::BEGIN@4";
}
subgraph cluster_Class_MOP_Class {
	label="Class::MOP::Class";
	"Class::MOP::Class::BEGIN@14";
	"Class::MOP::Class::linearized_isa";
	"Class::MOP::Class::find_attribute_by_name";
	"Class::MOP::Class::class_precedence_list";
	"Class::MOP::Class::make_immutable";
	"Class::MOP::Class::_inline_slot_initializers";
	"Class::MOP::Class::_inline_slot_initializer";
	"Class::MOP::Class::_inline_fallback_constructor";
	"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]";
	"Class::MOP::Class::BEGIN@9";
	"Class::MOP::Class::BEGIN@17";
	"Class::MOP::Class::_immutable_metaclass";
	"Class::MOP::Class::immutable_trait";
	"Class::MOP::Class::BEGIN@13";
	"Class::MOP::Class::_inline_default_value";
	"Class::MOP::Class::_construct_instance";
	"Class::MOP::Class::_single_metaclass_is_compatible";
	"Class::MOP::Class::_inline_create_instance";
	"Class::MOP::Class::_inline_preserve_weak_metaclasses";
	"Class::MOP::Class::find_all_methods_by_name";
	"Class::MOP::Class::remove_attribute";
	"Class::MOP::Class::create";
	"Class::MOP::Class::instance_metaclass";
	"Class::MOP::Class::find_method_by_name";
	"Class::MOP::Class::_method_lookup_order";
	"Class::MOP::Class::_eval_environment";
	"Class::MOP::Class::constructor_name";
	"Class::MOP::Class::_immutable_options";
	"Class::MOP::Class::_check_single_metaclass_compatibility";
	"Class::MOP::Class::_check_metaclass_compatibility";
	"Class::MOP::Class::try {...} ";
	"Class::MOP::Class::CORE:sort";
	"Class::MOP::Class::_inline_init_attr_from_constructor";
	"Class::MOP::Class::_inline_extra_init";
	"Class::MOP::Class::is_mutable";
	"Class::MOP::Class::_inline_new_object";
	"Class::MOP::Class::destructor_class";
	"Class::MOP::Class::BEGIN@7";
	"Class::MOP::Class::add_before_method_modifier";
	"Class::MOP::Class::_install_inlined_code";
	"Class::MOP::Class::_base_metaclasses";
	"Class::MOP::Class::_single_metaclass_can_be_made_compatible";
	"Class::MOP::Class::invalidate_meta_instances";
	"Class::MOP::Class::BEGIN@10";
	"Class::MOP::Class::add_around_method_modifier";
	"Class::MOP::Class::_superclasses_updated";
	"Class::MOP::Class::BEGIN@4";
	"Class::MOP::Class::BEGIN@18";
	"Class::MOP::Class::_class_metaclass_can_be_made_compatible";
	"Class::MOP::Class::constructor_class";
	"Class::MOP::Class::_initialize_immutable";
	"Class::MOP::Class::_post_add_attribute";
	"Class::MOP::Class::invalidate_meta_instance";
	"Class::MOP::Class::BEGIN@8";
	"Class::MOP::Class::_generate_fallback_constructor";
	"Class::MOP::Class::_inline_accessors";
	"Class::MOP::Class::new_object";
	"Class::MOP::Class::BEGIN@5";
	"Class::MOP::Class::find_next_method_by_name";
	"Class::MOP::Class::_inline_generate_instance";
	"Class::MOP::Class::_inline_constructor";
	"Class::MOP::Class::_inline_params";
	"Class::MOP::Class::_superclass_metas";
	"Class::MOP::Class::get_all_attributes";
	"Class::MOP::Class::_rebless_as_immutable";
	"Class::MOP::Class::_check_class_metaclass_compatibility";
	"Class::MOP::Class::_new";
	"Class::MOP::Class::BEGIN@20";
	"Class::MOP::Class::superclasses";
	"Class::MOP::Class::_fix_metaclass_incompatibility";
	"Class::MOP::Class::BEGIN@15";
	"Class::MOP::Class::initialize";
	"Class::MOP::Class::BEGIN@16";
	"Class::MOP::Class::_inline_init_attr_from_default";
	"Class::MOP::Class::is_immutable";
	"Class::MOP::Class::_construct_class_instance";
	"Class::MOP::Class::_real_ref_name";
	"Class::MOP::Class::_inline_destructor";
	"Class::MOP::Class::get_meta_instance";
	"Class::MOP::Class::get_all_methods";
	"Class::MOP::Class::_create_meta_instance";
	"Class::MOP::Class::_attach_attribute";
	"Class::MOP::Class::_add_inlined_method";
	"Class::MOP::Class::_class_metaclass_is_compatible";
	"Class::MOP::Class::_can_fix_metaclass_incompatibility";
	"Class::MOP::Class::BEGIN@11";
	"Class::MOP::Class::update_meta_instance_dependencies";
}
subgraph cluster_Eval_Closure_Sandbox_243 {
	label="Eval::Closure::Sandbox_243";
	"Eval::Closure::Sandbox_243::__ANON__[(eval 360)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_424 {
	label="Eval::Closure::Sandbox_424";
	"Eval::Closure::Sandbox_424::__ANON__[(eval 594)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Bio_Roary_CommandLine_RoaryPostAnalysis {
	label="Bio::Roary::CommandLine::RoaryPostAnalysis";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_create_rplots";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:readline";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::cpus";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::meta";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::core_definition";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@16";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::job_runner";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::translation_table";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::new";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_delete_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::args";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::group_limit";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@1";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::verbose_stats";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::DESTROY";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::run";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::help";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::_error_message";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:open";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_multifasta_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_pan_geneome_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_split_groups";
}
subgraph cluster_Eval_Closure_Sandbox_46 {
	label="Eval::Closure::Sandbox_46";
	"Eval::Closure::Sandbox_46::__ANON__[(eval 70)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Class_MOP {
	label="Class::MOP";
	"Class::MOP::does_metaclass_exist";
	"Class::MOP::BEGIN@16";
	"Class::MOP::__ANON__[Class/MOP.pm:499]";
	"Class::MOP::__ANON__[Class/MOP.pm:184]";
	"Class::MOP::BEGIN@4";
	"Class::MOP::__ANON__[Class/MOP.pm:270]";
	"Class::MOP::BEGIN@17";
	"Class::MOP::get_metaclass_by_name";
	"Class::MOP::BEGIN@14";
	"Class::MOP::class_of";
	"Class::MOP::BEGIN@7";
	"Class::MOP::__ANON__[Class/MOP.pm:139]";
	"Class::MOP::BEGIN@18";
	"Class::MOP::__ANON__[Class/MOP.pm:290]";
	"Class::MOP::BEGIN@19";
	"Class::MOP::__ANON__[Class/MOP.pm:243]";
	"Class::MOP::__ANON__[Class/MOP.pm:307]";
	"Class::MOP::BEGIN@15";
	"Class::MOP::__ANON__";
	"Class::MOP::store_metaclass_by_name";
	"Class::MOP::BEGIN@20";
	"Class::MOP::_definition_context";
	"Class::MOP::__ANON__[Class/MOP.pm:211]";
	"Class::MOP::BEGIN@10";
	"Class::MOP::metaclass_is_weak";
	"Class::MOP::BEGIN@11";
	"Class::MOP::BEGIN@9";
	"Class::MOP::BEGIN@12";
	"Class::MOP::BEGIN@5";
	"Class::MOP::BEGIN@22";
	"Class::MOP::get_code_info";
}
subgraph cluster_Eval_Closure_Sandbox_263 {
	label="Eval::Closure::Sandbox_263";
	"Eval::Closure::Sandbox_263::__ANON__[(eval 389)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_128 {
	label="Eval::Closure::Sandbox_128";
	"Eval::Closure::Sandbox_128::__ANON__[(eval 153)[Eval/Closure.pm:125]:31]";
}
subgraph cluster_Eval_Closure_Sandbox_335 {
	label="Eval::Closure::Sandbox_335";
	"Eval::Closure::Sandbox_335::__ANON__[(eval 478)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_Eval_Closure_Sandbox_81 {
	label="Eval::Closure::Sandbox_81";
	"Eval::Closure::Sandbox_81::__ANON__[(eval 106)[Eval/Closure.pm:125]:28]";
}
subgraph cluster_Eval_Closure_Sandbox_133 {
	label="Eval::Closure::Sandbox_133";
	"Eval::Closure::Sandbox_133::__ANON__[(eval 158)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_179 {
	label="Eval::Closure::Sandbox_179";
	"Eval::Closure::Sandbox_179::__ANON__[(eval 210)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_390 {
	label="Eval::Closure::Sandbox_390";
	"Eval::Closure::Sandbox_390::__ANON__[(eval 560)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_365 {
	label="Eval::Closure::Sandbox_365";
	"Eval::Closure::Sandbox_365::__ANON__[(eval 508)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_109 {
	label="Eval::Closure::Sandbox_109";
	"Eval::Closure::Sandbox_109::__ANON__[(eval 134)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_432 {
	label="Eval::Closure::Sandbox_432";
	"Eval::Closure::Sandbox_432::CORE:match";
	"Eval::Closure::Sandbox_432::__ANON__[(eval 602)[Eval/Closure.pm:125]:21]";
}
subgraph cluster_Eval_Closure_Sandbox_364 {
	label="Eval::Closure::Sandbox_364";
	"Eval::Closure::Sandbox_364::__ANON__[(eval 507)[Eval/Closure.pm:125]:21]";
}
subgraph cluster_Eval_Closure_Sandbox_191 {
	label="Eval::Closure::Sandbox_191";
	"Eval::Closure::Sandbox_191::__ANON__[(eval 222)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_29 {
	label="Eval::Closure::Sandbox_29";
	"Eval::Closure::Sandbox_29::__ANON__[(eval 53)[Eval/Closure.pm:125]:55]";
}
subgraph cluster_Eval_Closure_Sandbox_402 {
	label="Eval::Closure::Sandbox_402";
	"Eval::Closure::Sandbox_402::__ANON__[(eval 572)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Graph_Traversal_DFS {
	label="Graph::Traversal::DFS";
	"Graph::Traversal::DFS::current";
	"Graph::Traversal::DFS::see";
	"Graph::Traversal::DFS::BEGIN@6";
	"Graph::Traversal::DFS::BEGIN@5";
	"Graph::Traversal::DFS::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_36 {
	label="Eval::Closure::Sandbox_36";
	"Eval::Closure::Sandbox_36::__ANON__[(eval 60)[Eval/Closure.pm:125]:55]";
}
subgraph cluster_File_Basename {
	label="File::Basename";
	"File::Basename::BEGIN@52";
	"File::Basename::BEGIN@371";
	"File::Basename::BEGIN@50";
	"File::Basename::fileparse_set_fstype";
	"File::Basename::CORE:subst";
	"File::Basename::BEGIN@42";
	"File::Basename::fileparse";
	"File::Basename::CORE:regcomp";
	"File::Basename::CORE:match";
	"File::Basename::BEGIN@51";
}
subgraph cluster_Bio_Tools_CodonTable {
	label="Bio::Tools::CodonTable";
	"Bio::Tools::CodonTable::BEGIN@187";
	"Bio::Tools::CodonTable::BEGIN@190";
	"Bio::Tools::CodonTable::BEGIN@199";
	"Bio::Tools::CodonTable::BEGIN@198";
	"Bio::Tools::CodonTable::BEGIN@191";
	"Bio::Tools::CodonTable::BEGIN@193";
	"Bio::Tools::CodonTable::BEGIN@185";
}
subgraph cluster_Carp_Heavy {
	label="Carp::Heavy";
	"Carp::Heavy::BEGIN@3";
}
subgraph cluster_Class_MOP_Class_Immutable_Class_MOP_Class {
	label="Class::MOP::Class::Immutable::Class::MOP::Class";
	"Class::MOP::Class::Immutable::Class::MOP::Class::_method_map";
	"Class::MOP::Class::Immutable::Class::MOP::Class::get_meta_instance";
	"Class::MOP::Class::Immutable::Class::MOP::Class::get_all_attributes";
	"Class::MOP::Class::Immutable::Class::MOP::Class::is_immutable";
	"Class::MOP::Class::Immutable::Class::MOP::Class::linearized_isa";
}
subgraph cluster_Eval_Closure_Sandbox_283 {
	label="Eval::Closure::Sandbox_283";
	"Eval::Closure::Sandbox_283::__ANON__[(eval 409)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_File_Spec_Unix {
	label="File::Spec::Unix";
	"File::Spec::Unix::BEGIN@127";
	"File::Spec::Unix::canonpath";
	"File::Spec::Unix::BEGIN@136";
	"File::Spec::Unix::CORE:ftewrite";
	"File::Spec::Unix::splitpath";
	"File::Spec::Unix::splitdir";
	"File::Spec::Unix::BEGIN@3";
	"File::Spec::Unix::_cached_tmpdir";
	"File::Spec::Unix::catdir";
	"File::Spec::Unix::curdir";
	"File::Spec::Unix::BEGIN@242";
	"File::Spec::Unix::BEGIN@179";
	"File::Spec::Unix::BEGIN@145";
	"File::Spec::Unix::CORE:ftdir";
	"File::Spec::Unix::rootdir";
	"File::Spec::Unix::CORE:match";
	"File::Spec::Unix::_tmpdir";
	"File::Spec::Unix::catfile";
	"File::Spec::Unix::updir";
	"File::Spec::Unix::BEGIN@220";
	"File::Spec::Unix::catpath";
	"File::Spec::Unix::file_name_is_absolute";
	"File::Spec::Unix::tmpdir";
	"File::Spec::Unix::BEGIN@4";
	"File::Spec::Unix::_cache_tmpdir";
}
subgraph cluster_Eval_Closure_Sandbox_61 {
	label="Eval::Closure::Sandbox_61";
	"Eval::Closure::Sandbox_61::__ANON__[(eval 85)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_401 {
	label="Eval::Closure::Sandbox_401";
	"Eval::Closure::Sandbox_401::__ANON__[(eval 571)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_integer {
	label="integer";
	"integer::import";
}
subgraph cluster_Eval_Closure_Sandbox_280 {
	label="Eval::Closure::Sandbox_280";
	"Eval::Closure::Sandbox_280::__ANON__[(eval 406)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Moose_Object {
	label="Moose::Object";
	"Moose::Object::BEGIN@13";
	"Moose::Object::BEGIN@5";
	"Moose::Object::BEGIN@9";
	"Moose::Object::BEGIN@11";
	"Moose::Object::BEGIN@16";
	"Moose::Object::BEGIN@106";
	"Moose::Object::BEGIN@8";
	"Moose::Object::BEGIN@4";
	"Moose::Object::BEGIN@79";
	"Moose::Object::BEGIN@7";
	"Moose::Object::BEGIN@15";
	"Moose::Object::BEGIN@10";
}
subgraph cluster_Eval_Closure_Sandbox_120 {
	label="Eval::Closure::Sandbox_120";
	"Eval::Closure::Sandbox_120::__ANON__[(eval 145)[Eval/Closure.pm:125]:25]";
}
subgraph cluster_Graph_AdjacencyMap_Light {
	label="Graph::AdjacencyMap::Light";
	"Graph::AdjacencyMap::Light::_get_id_path";
	"Graph::AdjacencyMap::Light::_is_HYPER";
	"Graph::AdjacencyMap::Light::_get_path_id";
	"Graph::AdjacencyMap::Light::__attr";
	"Graph::AdjacencyMap::Light::BEGIN@14";
	"Graph::AdjacencyMap::Light::BEGIN@7";
	"Graph::AdjacencyMap::Light::set_path";
	"Graph::AdjacencyMap::Light::_is_COUNT";
	"Graph::AdjacencyMap::Light::BEGIN@15";
	"Graph::AdjacencyMap::Light::_is_MULTI";
	"Graph::AdjacencyMap::Light::BEGIN@10";
	"Graph::AdjacencyMap::Light::CORE:sort";
	"Graph::AdjacencyMap::Light::BEGIN@12";
	"Graph::AdjacencyMap::Light::_new";
	"Graph::AdjacencyMap::Light::BEGIN@9";
	"Graph::AdjacencyMap::Light::paths";
}
subgraph cluster_Moose_Role {
	label="Moose::Role";
	"Moose::Role::BEGIN@7";
	"Moose::Role::BEGIN@13";
	"Moose::Role::BEGIN@11";
	"Moose::Role::BEGIN@9";
	"Moose::Role::BEGIN@16";
	"Moose::Role::BEGIN@6";
	"Moose::Role::import";
	"Moose::Role::BEGIN@17";
	"Moose::Role::BEGIN@18";
	"Moose::Role::has";
	"Moose::Role::BEGIN@8";
	"Moose::Role::BEGIN@14";
	"Moose::Role::init_meta";
}
subgraph cluster_Eval_Closure_Sandbox_238 {
	label="Eval::Closure::Sandbox_238";
	"Eval::Closure::Sandbox_238::__ANON__[(eval 355)[Eval/Closure.pm:125]:126]";
}
subgraph cluster_Heap071_Fibonacci {
	label="Heap071::Fibonacci";
	"Heap071::Fibonacci::BEGIN@3";
	"Heap071::Fibonacci::BEGIN@4";
	"Heap071::Fibonacci::consolidate";
	"Heap071::Fibonacci::new";
	"Heap071::Fibonacci::top";
	"Heap071::Fibonacci::extract_top";
	"Heap071::Fibonacci::elem";
	"Heap071::Fibonacci::elem_DESTROY";
	"Heap071::Fibonacci::DESTROY";
	"Heap071::Fibonacci::link_as_parent_of";
	"Heap071::Fibonacci::add";
	"Heap071::Fibonacci::link_to_left_of";
}
subgraph cluster_main {
	label="main";
	"main::NULL";
	"main::RUNTIME";
}
subgraph cluster_Eval_Closure_Sandbox_114 {
	label="Eval::Closure::Sandbox_114";
	"Eval::Closure::Sandbox_114::__ANON__[(eval 139)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Graph_AdjacencyMap {
	label="Graph::AdjacencyMap";
	"Graph::AdjacencyMap::CORE:sort";
	"Graph::AdjacencyMap::_new";
	"Graph::AdjacencyMap::_get_path_attr";
	"Graph::AdjacencyMap::_is_UNORD";
	"Graph::AdjacencyMap::BEGIN@3";
	"Graph::AdjacencyMap::_is_COUNT";
	"Graph::AdjacencyMap::_set_path_attr";
	"Graph::AdjacencyMap::_new_node";
	"Graph::AdjacencyMap::_is_MULTI";
	"Graph::AdjacencyMap::__get_path_node";
	"Graph::AdjacencyMap::_successors";
	"Graph::AdjacencyMap::BEGIN@6";
	"Graph::AdjacencyMap::_ids";
	"Graph::AdjacencyMap::_inc_node";
}
subgraph cluster_Bio_Roary_Exceptions_CouldntWriteToFile {
	label="Bio::Roary::Exceptions::CouldntWriteToFile";
	"Bio::Roary::Exceptions::CouldntWriteToFile::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_416 {
	label="Eval::Closure::Sandbox_416";
	"Eval::Closure::Sandbox_416::__ANON__[(eval 586)[Eval/Closure.pm:125]:16]";
}
subgraph cluster_Eval_Closure_Sandbox_142 {
	label="Eval::Closure::Sandbox_142";
	"Eval::Closure::Sandbox_142::__ANON__[(eval 167)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Class_MOP_Package {
	label="Class::MOP::Package";
	"Class::MOP::Package::get_package_symbol";
	"Class::MOP::Package::initialize";
	"Class::MOP::Package::BEGIN@171";
	"Class::MOP::Package::BEGIN@8";
	"Class::MOP::Package::has_package_symbol";
	"Class::MOP::Package::BEGIN@9";
	"Class::MOP::Package::BEGIN@12";
	"Class::MOP::Package::remove_package_symbol";
	"Class::MOP::Package::list_all_package_symbols";
	"Class::MOP::Package::BEGIN@10";
	"Class::MOP::Package::BEGIN@95";
	"Class::MOP::Package::_new";
	"Class::MOP::Package::BEGIN@7";
	"Class::MOP::Package::BEGIN@5";
	"Class::MOP::Package::add_package_symbol";
	"Class::MOP::Package::_package_stash";
	"Class::MOP::Package::name";
	"Class::MOP::Package::create";
	"Class::MOP::Package::get_or_add_package_symbol";
	"Class::MOP::Package::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_389 {
	label="Eval::Closure::Sandbox_389";
	"Eval::Closure::Sandbox_389::__ANON__[(eval 532)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_172 {
	label="Eval::Closure::Sandbox_172";
	"Eval::Closure::Sandbox_172::__ANON__[(eval 203)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Eval_Closure_Sandbox_288 {
	label="Eval::Closure::Sandbox_288";
	"Eval::Closure::Sandbox_288::__ANON__[(eval 414)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_Eval_Closure_Sandbox_197 {
	label="Eval::Closure::Sandbox_197";
	"Eval::Closure::Sandbox_197::__ANON__[(eval 298)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Eval_Closure_Sandbox_212 {
	label="Eval::Closure::Sandbox_212";
	"Eval::Closure::Sandbox_212::__ANON__[(eval 313)[Eval/Closure.pm:125]:29]";
}
subgraph cluster_Eval_Closure_Sandbox_417 {
	label="Eval::Closure::Sandbox_417";
	"Eval::Closure::Sandbox_417::__ANON__[(eval 587)[Eval/Closure.pm:125]:15]";
}
subgraph cluster_Eval_Closure_Sandbox_379 {
	label="Eval::Closure::Sandbox_379";
	"Eval::Closure::Sandbox_379::__ANON__[(eval 522)[Eval/Closure.pm:125]:26]";
}
subgraph cluster_Bio_Roary_Exceptions_FileNotFound {
	label="Bio::Roary::Exceptions::FileNotFound";
	"Bio::Roary::Exceptions::FileNotFound::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_155 {
	label="Eval::Closure::Sandbox_155";
	"Eval::Closure::Sandbox_155::__ANON__[(eval 186)[Eval/Closure.pm:125]:22]";
}
subgraph cluster_Bio_Roary_Output_EmblGroups {
	label="Bio::Roary::Output::EmblGroups";
	"Bio::Roary::Output::EmblGroups::_block_colour";
	"Bio::Roary::Output::EmblGroups::BEGIN@21";
	"Bio::Roary::Output::EmblGroups::_annotation_type";
	"Bio::Roary::Output::EmblGroups::CORE:print";
	"Bio::Roary::Output::EmblGroups::create_files";
	"Bio::Roary::Output::EmblGroups::CORE:match";
	"Bio::Roary::Output::EmblGroups::CORE:sort";
	"Bio::Roary::Output::EmblGroups::_output_fh";
	"Bio::Roary::Output::EmblGroups::CORE:subst";
	"Bio::Roary::Output::EmblGroups::BEGIN@239";
	"Bio::Roary::Output::EmblGroups::BEGIN@22";
	"Bio::Roary::Output::EmblGroups::_header_block";
	"Bio::Roary::Output::EmblGroups::BEGIN@19";
	"Bio::Roary::Output::EmblGroups::_build__output_fh";
	"Bio::Roary::Output::EmblGroups::output_header_filename";
	"Bio::Roary::Output::EmblGroups::CORE:close";
	"Bio::Roary::Output::EmblGroups::ordering_key";
	"Bio::Roary::Output::EmblGroups::BEGIN@20";
	"Bio::Roary::Output::EmblGroups::DESTROY";
	"Bio::Roary::Output::EmblGroups::CORE:open";
	"Bio::Roary::Output::EmblGroups::analyse_groups_obj";
	"Bio::Roary::Output::EmblGroups::_build__groups_to_files";
	"Bio::Roary::Output::EmblGroups::_sorted_file_names";
	"Bio::Roary::Output::EmblGroups::_build__sorted_file_names";
	"Bio::Roary::Output::EmblGroups::annotate_groups_obj";
	"Bio::Roary::Output::EmblGroups::new";
	"Bio::Roary::Output::EmblGroups::_output_header_fh";
	"Bio::Roary::Output::EmblGroups::_fragment_blocks";
	"Bio::Roary::Output::EmblGroups::BEGIN@23";
	"Bio::Roary::Output::EmblGroups::output_filename";
	"Bio::Roary::Output::EmblGroups::_build__output_header_fh";
	"Bio::Roary::Output::EmblGroups::meta";
	"Bio::Roary::Output::EmblGroups::_block";
	"Bio::Roary::Output::EmblGroups::_header_bottom";
	"Bio::Roary::Output::EmblGroups::_header_top";
	"Bio::Roary::Output::EmblGroups::_build_output_header_filename";
	"Bio::Roary::Output::EmblGroups::groups_to_contigs";
	"Bio::Roary::Output::EmblGroups::_groups_to_files";
}
subgraph cluster_Eval_Closure_Sandbox_6 {
	label="Eval::Closure::Sandbox_6";
	"Eval::Closure::Sandbox_6::__ANON__[(eval 30)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Bio_Roary_ClustersRole {
	label="Bio::Roary::ClustersRole";
	"Bio::Roary::ClustersRole::BEGIN@12";
	"Bio::Roary::ClustersRole::BEGIN@2";
	"Bio::Roary::ClustersRole::_build__clusters_fh";
	"Bio::Roary::ClustersRole::BEGIN@1";
	"Bio::Roary::ClustersRole::CORE:match";
	"Bio::Roary::ClustersRole::BEGIN@11";
	"Bio::Roary::ClustersRole::CORE:open";
	"Bio::Roary::ClustersRole::CORE:readline";
	"Bio::Roary::ClustersRole::_build__clustered_genes";
}
subgraph cluster_Eval_Closure_Sandbox_183 {
	label="Eval::Closure::Sandbox_183";
	"Eval::Closure::Sandbox_183::__ANON__[(eval 214)[Eval/Closure.pm:125]:13]";
}
subgraph cluster_POSIX {
	label="POSIX";
	"POSIX::load_imports";
	"POSIX::BEGIN@204";
	"POSIX::BEGIN@2";
	"POSIX::ceil";
	"POSIX::BEGIN@11";
	"POSIX::import";
	"POSIX::BEGIN@3";
}
subgraph cluster_Eval_Closure_Sandbox_4 {
	label="Eval::Closure::Sandbox_4";
	"Eval::Closure::Sandbox_4::__ANON__[(eval 28)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Eval_Closure_Sandbox_140 {
	label="Eval::Closure::Sandbox_140";
	"Eval::Closure::Sandbox_140::__ANON__[(eval 165)[Eval/Closure.pm:125]:6]";
}
subgraph cluster_Class_MOP_Mixin_AttributeCore {
	label="Class::MOP::Mixin::AttributeCore";
	"Class::MOP::Mixin::AttributeCore::BEGIN@4";
	"Class::MOP::Mixin::AttributeCore::predicate";
	"Class::MOP::Mixin::AttributeCore::has_builder";
	"Class::MOP::Mixin::AttributeCore::has_initializer";
	"Class::MOP::Mixin::AttributeCore::has_accessor";
	"Class::MOP::Mixin::AttributeCore::has_default";
	"Class::MOP::Mixin::AttributeCore::name";
	"Class::MOP::Mixin::AttributeCore::clearer";
	"Class::MOP::Mixin::AttributeCore::BEGIN@7";
	"Class::MOP::Mixin::AttributeCore::has_reader";
	"Class::MOP::Mixin::AttributeCore::is_default_a_coderef";
	"Class::MOP::Mixin::AttributeCore::definition_context";
	"Class::MOP::Mixin::AttributeCore::_set_insertion_order";
	"Class::MOP::Mixin::AttributeCore::has_writer";
	"Class::MOP::Mixin::AttributeCore::reader";
	"Class::MOP::Mixin::AttributeCore::accessor";
	"Class::MOP::Mixin::AttributeCore::BEGIN@5";
	"Class::MOP::Mixin::AttributeCore::default";
	"Class::MOP::Mixin::AttributeCore::has_clearer";
	"Class::MOP::Mixin::AttributeCore::has_predicate";
	"Class::MOP::Mixin::AttributeCore::writer";
	"Class::MOP::Mixin::AttributeCore::BEGIN@9";
	"Class::MOP::Mixin::AttributeCore::init_arg";
	"Class::MOP::Mixin::AttributeCore::builder";
}
subgraph cluster_Graph_Undirected {
	label="Graph::Undirected";
	"Graph::Undirected::BEGIN@3";
	"Graph::Undirected::new";
	"Graph::Undirected::BEGIN@5";
	"Graph::Undirected::BEGIN@4";
}
subgraph cluster_Eval_Closure_Sandbox_102 {
	label="Eval::Closure::Sandbox_102";
	"Eval::Closure::Sandbox_102::__ANON__[(eval 127)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_17 {
	label="Eval::Closure::Sandbox_17";
	"Eval::Closure::Sandbox_17::__ANON__[(eval 41)[Eval/Closure.pm:125]:49]";
}
subgraph cluster_Graph_BitMatrix {
	label="Graph::BitMatrix";
	"Graph::BitMatrix::BEGIN@3";
}
subgraph cluster_Bio_Factory_FTLocationFactory {
	label="Bio::Factory::FTLocationFactory";
	"Bio::Factory::FTLocationFactory::BEGIN@99";
	"Bio::Factory::FTLocationFactory::BEGIN@98";
	"Bio::Factory::FTLocationFactory::BEGIN@97";
	"Bio::Factory::FTLocationFactory::CORE:qr";
	"Bio::Factory::FTLocationFactory::BEGIN@92";
	"Bio::Factory::FTLocationFactory::BEGIN@102";
	"Bio::Factory::FTLocationFactory::BEGIN@104";
	"Bio::Factory::FTLocationFactory::BEGIN@93";
}
subgraph cluster_Bio_AnnotationI {
	label="Bio::AnnotationI";
	"Bio::AnnotationI::BEGIN@120";
	"Bio::AnnotationI::BEGIN@116";
}
subgraph cluster_Moose_Meta_Method_Delegation {
	label="Moose::Meta::Method::Delegation";
	"Moose::Meta::Method::Delegation::BEGIN@7";
	"Moose::Meta::Method::Delegation::BEGIN@4";
	"Moose::Meta::Method::Delegation::BEGIN@5";
	"Moose::Meta::Method::Delegation::BEGIN@9";
	"Moose::Meta::Method::Delegation::BEGIN@12";
}
subgraph cluster_Eval_Closure_Sandbox_132 {
	label="Eval::Closure::Sandbox_132";
	"Eval::Closure::Sandbox_132::__ANON__[(eval 157)[Eval/Closure.pm:125]:9]";
}
subgraph cluster_Eval_Closure_Sandbox_167 {
	label="Eval::Closure::Sandbox_167";
	"Eval::Closure::Sandbox_167::__ANON__[(eval 198)[Eval/Closure.pm:125]:4]";
}
subgraph cluster_Moose_Meta_Role_Application {
	label="Moose::Meta::Role::Application";
	"Moose::Meta::Role::Application::apply_overloading";
	"Moose::Meta::Role::Application::BEGIN@6";
	"Moose::Meta::Role::Application::__ANON__[Moose/Meta/Role/Application.pm:23]";
	"Moose::Meta::Role::Application::apply";
	"Moose::Meta::Role::Application::get_method_aliases";
	"Moose::Meta::Role::Application::is_method_excluded";
	"Moose::Meta::Role::Application::BEGIN@4";
	"Moose::Meta::Role::Application::get_method_exclusions";
	"Moose::Meta::Role::Application::BEGIN@7";
	"Moose::Meta::Role::Application::meta";
	"Moose::Meta::Role::Application::__ANON__[Moose/Meta/Role/Application.pm:16]";
	"Moose::Meta::Role::Application::BEGIN@5";
	"Moose::Meta::Role::Application::BEGIN@11";
	"Moose::Meta::Role::Application::apply_around_method_modifiers";
	"Moose::Meta::Role::Application::is_method_aliased";
	"Moose::Meta::Role::Application::BEGIN@9";
	"Moose::Meta::Role::Application::new";
	"Moose::Meta::Role::Application::apply_before_method_modifiers";
	"Moose::Meta::Role::Application::apply_after_method_modifiers";
}
subgraph cluster_Eval_Closure_Sandbox_343 {
	label="Eval::Closure::Sandbox_343";
	"Eval::Closure::Sandbox_343::__ANON__[(eval 486)[Eval/Closure.pm:125]:8]";
}
subgraph cluster_Eval_Closure_Sandbox_327 {
	label="Eval::Closure::Sandbox_327";
	"Eval::Closure::Sandbox_327::__ANON__[(eval 470)[Eval/Closure.pm:125]:12]";
}
"Class::MOP::Class::_immutable_metaclass" -> "Class::MOP::Class::find_attribute_by_name";
"Bio::Tools::CodonTable::BEGIN@190" -> "Bio::Tools::IUPAC::BEGIN@170";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_126::__ANON__[(eval 151)[Eval/Closure.pm:125]:25]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_375::__ANON__[(eval 518)[Eval/Closure.pm:125]:13]";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@136";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_224::__ANON__[(eval 325)[Eval/Closure.pm:125]:4]";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@9";
"File::Temp::BEGIN@17" -> "Errno::BEGIN@8";
"Class::MOP::Class::find_attribute_by_name" -> "Class::MOP::Class::Immutable::Class::MOP::Class::linearized_isa";
"Class::MOP::Class::get_all_attributes" -> "Class::MOP::Class::Immutable::Class::MOP::Class::linearized_isa";
"Moose::Meta::TypeConstraint::Parameterized::_inline_check" -> "Moose::Meta::TypeConstraint::Parameterized::parameterized_from";
"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined" -> "Moose::Meta::TypeConstraint::Parameterized::parameterized_from";
"Moose::Meta::TypeConstraint::Parameterized::inline_environment" -> "Moose::Meta::TypeConstraint::Parameterized::parameterized_from";
"Moose::BEGIN@34" -> "Moose::Meta::Role::Application::BEGIN@11";
"base::import" -> "Bio::Root::Root::BEGIN@3";
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"Moose::before" -> "Moose::before";
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"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Method::wrap";
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"Exporter::import" -> "Exporter::CORE:match";
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"Graph::edges" -> "Graph::edges05";
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"File::Basename::fileparse" -> "File::Basename::CORE:subst";
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"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::translation_table";
"base::import" -> "Bio::Location::Atomic::BEGIN@79";
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"Moose::Meta::TypeConstraint::equals" -> "Moose::Util::TypeConstraints::find_type_constraint";
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"parent::import" -> "Class::MOP::Mixin::BEGIN@5";
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"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::groupfile";
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"File::Temp::_replace_XX" -> "File::Temp::CORE:subst";
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"Bio::Roary::ClustersRole::_build__clustered_genes" -> "Bio::Roary::ClustersRole::CORE:match";
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"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::AnalyseGroups::_count_num_files_in_group";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::AnalyseGroups::_count_num_files_in_group";
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"Data::OptList::BEGIN@10" -> "overload::BEGIN@116";
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"Moose::Exporter::build_import_methods" -> "Moose::Exporter::_make_exporter";
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"Try::Tiny::BEGIN@1" -> "Sub::Name::BEGIN@44";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_273::__ANON__[(eval 399)[Eval/Closure.pm:125]:13]";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::ToClass::check_required_methods";
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"Moose::extends" -> "Moose::extends";
"IO::Handle::BEGIN@266" -> "IO::BEGIN@5";
"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::Class::_real_ref_name";
"Class::MOP::Class::_immutable_metaclass" -> "Class::MOP::Class::_real_ref_name";
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"Class::MOP::Class::_class_metaclass_can_be_made_compatible" -> "Class::MOP::Class::_real_ref_name";
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"Bio::Roary::AnalyseGroups::_number_of_isolates" -> "Eval::Closure::Sandbox_171::CORE:match";
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"main::RUNTIME" -> "Bio::Roary::Main::RoaryPostAnalysis::BEGIN@15";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_326::__ANON__[(eval 469)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Role::apply" -> "Moose::Meta::Role::application_to_class_class";
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"base::import" -> "Bio::Root::Root::BEGIN@146";
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"Bio::Roary::OrderGenes::_build__groups_to_file_contigs" -> "Bio::Roary::OrderGenes::_groups_qc";
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"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::ToClass::check_role_exclusions";
"Text::CSV::_load_pp" -> "Text::CSV_PP::BEGIN@10";
"Heap071::Fibonacci::add" -> "Heap071::Fibonacci::elem";
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"AutoLoader::AUTOLOAD" -> "AutoLoader::find_filename";
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"Moose::BEGIN@11" -> "Module::Runtime::import";
"Module::Implementation::BEGIN@9" -> "Module::Runtime::import";
"Class::MOP::Class::Immutable::Trait::BEGIN@8" -> "Module::Runtime::import";
"Moose::Role::BEGIN@9" -> "Module::Runtime::import";
"Class::Load::BEGIN@10" -> "Module::Runtime::import";
"Class::MOP::MiniTrait::BEGIN@7" -> "Module::Runtime::import";
"Class::MOP::Object::BEGIN@9" -> "Module::Runtime::import";
"Moose::Meta::Attribute::Native::BEGIN@6" -> "Module::Runtime::import";
"metaclass::BEGIN@7" -> "Module::Runtime::import";
"Class::MOP::Mixin::BEGIN@8" -> "Module::Runtime::import";
"Class::MOP::Package::BEGIN@9" -> "Module::Runtime::import";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@6";
"Class::MOP::Class::_immutable_metaclass" -> "Moose::Meta::Class::immutable_trait";
"Class::MOP::Class::_immutable_options" -> "Moose::Meta::Class::immutable_trait";
"Moose::Meta::Attribute::_inline_get_value" -> "Moose::Meta::Attribute::_inline_return_auto_deref";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_110::__ANON__[(eval 135)[Eval/Closure.pm:125]:9]";
"Sub::Exporter::_do_import" -> "Sub::Exporter::default_generator";
"Bio::Roary::SplitGroups::_build__analyse_groups_obj" -> "Bio::Roary::SplitGroups::_pre_filter_fasta_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_128::__ANON__[(eval 153)[Eval/Closure.pm:125]:31]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@28";
"Exporter::export" -> "Exporter::as_heavy";
"Exporter::export_tags" -> "Exporter::as_heavy";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::BEGIN@59";
"Moose::BEGIN@11" -> "Module::Runtime::BEGIN@120";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@10";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@247";
"parent::import" -> "Class::MOP::Package::BEGIN@7";
"Bio::Roary::ContigsToGeneIDsFromGFF::_awk_filter" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Meta::TypeConstraint::Registry::new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_149::__ANON__[(eval 174)[Eval/Closure.pm:125]:4]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@26";
"Graph::vertices05" -> "Graph::AdjacencyMap::Light::_is_HYPER";
"Class::MOP::Class::_immutable_metaclass" -> "Class::MOP::does_metaclass_exist";
"Bio::Roary::OrderGenes::_build__groups_to_file_contigs" -> "Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids";
"Class::MOP::Method::Accessor::new" -> "Class::MOP::Method::Accessor::_initialize_body";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11";
"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@236";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_43::__ANON__[(eval 67)[Eval/Closure.pm:125]:22]";
"Moose::Meta::Method::Accessor::_generate_clearer_method" -> "Moose::Meta::Method::Accessor::_instance_is_inlinable";
"Moose::Meta::Method::Accessor::_generate_accessor_method" -> "Moose::Meta::Method::Accessor::_instance_is_inlinable";
"Moose::Meta::Method::Accessor::_generate_reader_method" -> "Moose::Meta::Method::Accessor::_instance_is_inlinable";
"Moose::Meta::Method::Accessor::_generate_predicate_method" -> "Moose::Meta::Method::Accessor::_instance_is_inlinable";
"Moose::Meta::Attribute::_inline_set_value" -> "Moose::Meta::Attribute::_inline_get_old_value_for_trigger";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::verbose_stats";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Class::MOP::Class::destructor_class";
"List::Util::all" -> "Class::MOP::Class::destructor_class";
"Class::MOP::Class::_immutable_options" -> "Class::MOP::Class::destructor_class";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@685";
"Graph::_connected_components" -> "Graph::_check_cache";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::meta";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@62";
"base::import" -> "Bio::Location::Atomic::BEGIN@81";
"Class::MOP::Mixin::HasMethods::remove_method" -> "Class::MOP::Package::remove_package_symbol";
"Bio::Roary::CommandLine::RoaryPostAnalysis::cpus" -> "Eval::Closure::Sandbox_426::CORE:match";
"Class::MOP::Mixin::HasOverloads::BEGIN@7" -> "Class::MOP::Overload::BEGIN@9";
"FindBin::init" -> "FindBin::CORE:ftfile";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@10";
"Opcode::_init_optags" -> "Opcode::CORE:subst";
"Bio::Roary::OrderGenes::_remove_weak_edges_from_graph" -> "Bio::Roary::OrderGenes::group_order";
"Bio::Roary::OrderGenes::_add_groups_to_graph" -> "Bio::Roary::OrderGenes::group_order";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Bio::Roary::OrderGenes::group_order";
"Bio::Roary::OrderGenes::_create_accessory_graph" -> "Bio::Roary::OrderGenes::group_order";
"parent::import" -> "Class::MOP::Method::Inlined::BEGIN@7";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@231";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_408::__ANON__[(eval 578)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Class::BEGIN@8" -> "Sub::Install::__ANON__[Sub/Install.pm:284]";
"Package::DeprecationManager::BEGIN@12" -> "Sub::Install::__ANON__[Sub/Install.pm:284]";
"Class::MOP::BEGIN@12" -> "Sub::Install::__ANON__[Sub/Install.pm:284]";
"Class::Load::BEGIN@8" -> "Sub::Install::__ANON__[Sub/Install.pm:284]";
"Moose::Util::BEGIN@8" -> "Sub::Install::__ANON__[Sub/Install.pm:284]";
"DynaLoader::bootstrap" -> "DynaLoader::CORE:subst";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_271::__ANON__[(eval 397)[Eval/Closure.pm:125]:12]";
"Bio::Roary::OrderGenes::_build_groups_to_contigs" -> "Bio::Roary::OrderGenes::_add_groups_to_graph";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@22";
"Moose::Meta::TypeConstraint::Union::BEGIN@8" -> "Moose::Meta::TypeCoercion::Union::BEGIN@5";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@3720";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@235";
"Class::MOP::Mixin::HasMethods::_get_local_methods" -> "Class::MOP::Mixin::HasMethods::_full_method_map";
"Class::MOP::Method::Generated::BEGIN@7" -> "Eval::Closure::BEGIN@6";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::CORE:print";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::Output::EmblGroups::CORE:print";
"Class::MOP::Class::create" -> "Class::MOP::Module::create";
"Bio::Roary::AnnotateGroups::BEGIN@22" -> "Data::Dumper::BEGIN@272";
"Package::Stash::XS::get_all_symbols" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::has_symbol" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::get_symbol" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::remove_symbol" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::list_all_symbols" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::add_symbol" -> "Package::Stash::XS::namespace";
"Package::Stash::XS::get_or_add_symbol" -> "Package::Stash::XS::namespace";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@352";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_276::__ANON__[(eval 402)[Eval/Closure.pm:125]:13]";
"Bio::DB::InMemoryCache::BEGIN@75" -> "Bio::Seq::BEGIN@461";
"Bio::Root::IO::BEGIN@7" -> "Fcntl::BEGIN@58";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::inline_as";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@25";
"utf8::_loose_name" -> "utf8::CORE:match";
"utf8::SWASHNEW" -> "utf8::CORE:match";
"Moose::Meta::Class::BEGIN@17" -> "Moose::Meta::Method::Destructor::BEGIN@11";
"Class::MOP::Class::make_immutable" -> "Moose::Meta::Class::_immutable_options";
"Bio::Roary::AnnotateGroups::_build__ids_to_gene_names" -> "Bio::Roary::GeneNamesFromGFF::new";
"Moose::Object::BEGIN@16" -> "if::work";
"Moose::Object::BEGIN@15" -> "if::work";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@18";
"Graph::BEGIN@29" -> "Graph::AdjacencyMap::Light::BEGIN@12";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::ordering_key";
"Bio::Roary::Output::EmblGroups::_header_block" -> "Bio::Roary::Output::EmblGroups::ordering_key";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::Output::EmblGroups::ordering_key";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_207::__ANON__[(eval 308)[Eval/Closure.pm:125]:12]";
"Bio::Roary::InflateClusters::_inflate_line" -> "Bio::Roary::InflateClusters::_inflate_gene";
"Class::MOP::Mixin::AttributeCore::BEGIN@9" -> "parent::BEGIN@2";
"Moose::Meta::TypeConstraint::Union::BEGIN@8" -> "Moose::Meta::TypeCoercion::Union::BEGIN@12";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@8";
"Bio::Roary::CommandLine::RoaryPostAnalysis::new" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@12";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_338::__ANON__[(eval 481)[Eval/Closure.pm:125]:9]";
"Graph::AdjacencyMap::_set_path_attr" -> "Graph::AdjacencyMap::Light::__attr";
"Package::Stash::XS::add_symbol" -> "Package::Stash::XS::name";
"Package::Stash::XS::namespace" -> "Package::Stash::XS::name";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_401::__ANON__[(eval 571)[Eval/Closure.pm:125]:13]";
"Module::Runtime::import" -> "Module::Runtime::CORE:match";
"Module::Runtime::is_module_name" -> "Module::Runtime::CORE:match";
"Text::CSV_PP::_combine" -> "Text::CSV_PP::CORE:subst";
"Bio::Roary::SplitGroups::BEGIN@318" -> "Moose::unimport";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@75" -> "Moose::unimport";
"Bio::Roary::GroupStatistics::BEGIN@202" -> "Moose::unimport";
"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@88" -> "Moose::unimport";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188" -> "Moose::unimport";
"Bio::Roary::OrderGenes::BEGIN@352" -> "Moose::unimport";
"Bio::Roary::GeneNamesFromGFF::BEGIN@65" -> "Moose::unimport";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@148" -> "Moose::unimport";
"Bio::Roary::Output::NumberOfGroups::BEGIN@116" -> "Moose::unimport";
"Bio::Roary::AnnotateGroups::BEGIN@325" -> "Moose::unimport";
"Bio::Roary::Output::EmblGroups::BEGIN@239" -> "Moose::unimport";
"Bio::Roary::PostAnalysis::BEGIN@225" -> "Moose::unimport";
"Bio::Roary::GroupLabels::BEGIN@59" -> "Moose::unimport";
"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142" -> "Moose::unimport";
"Bio::Roary::InflateClusters::BEGIN@106" -> "Moose::unimport";
"Bio::Roary::AnalyseGroups::BEGIN@142" -> "Moose::unimport";
"Bio::Roary::CommandLine::Common::BEGIN@38" -> "Moose::unimport";
"Bio::Annotation::Collection::BEGIN@92" -> "Bio::Annotation::TypeManager::BEGIN@80";
"File::Temp::_gettemp" -> "File::Spec::Unix::splitdir";
"File::Path::_is_subdir" -> "File::Spec::Unix::splitdir";
"DynaLoader::bootstrap" -> "DynaLoader::dl_install_xsub";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:252]";
"base::import" -> "Bio::PrimarySeq::BEGIN@128";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@4";
"Graph::has_edge" -> "Graph::CORE:sort";
"Bio::Roary::SplitGroups::_genes_to_files" -> "Bio::Roary::SplitGroups::_build__genes_to_files";
"Sub::Install::__ANON__[Sub/Install.pm:175]" -> "Sub::Install::__ANON__[Sub/Install.pm:187]";
"Module::Implementation::build_loader_sub" -> "Module::Implementation::_build_loader";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_103::__ANON__[(eval 128)[Eval/Closure.pm:125]:9]";
"Class::MOP::Class::_fix_metaclass_incompatibility" -> "Class::MOP::Class::_can_fix_metaclass_incompatibility";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::accessor_type";
"Class::MOP::Class::_create_meta_instance" -> "Class::MOP::Class::Immutable::Class::MOP::Class::get_all_attributes";
"Class::MOP::Class::_construct_instance" -> "Class::MOP::Class::Immutable::Class::MOP::Class::get_all_attributes";
"Moose::Meta::Attribute::new" -> "Class::MOP::Class::Immutable::Class::MOP::Class::get_all_attributes";
"Graph::BEGIN@13" -> "Graph::AdjacencyMap::BEGIN@6";
"Bio::Roary::Output::EmblGroups::output_header_filename" -> "Bio::Roary::Output::EmblGroups::_build_output_header_filename";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@21";
"Module::Implementation::__ANON__[Module/Implementation.pm:44]" -> "Module::Implementation::_copy_symbols";
"Module::Runtime::check_module_name" -> "Module::Runtime::is_module_name";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_372::__ANON__[(eval 515)[Eval/Closure.pm:125]:13]";
"parent::import" -> "Moose::Meta::Method::BEGIN@9";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@17";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::run";
"Bio::Roary::GroupLabels::add_labels" -> "Bio::Roary::GroupLabels::CORE:readline";
"Exporter::Heavy::__ANON__[Exporter/Heavy.pm:58]" -> "Exporter::Heavy::CORE:match";
"Exporter::Heavy::heavy_export" -> "Exporter::Heavy::CORE:match";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_115::__ANON__[(eval 140)[Eval/Closure.pm:125]:9]";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_202::__ANON__[(eval 303)[Eval/Closure.pm:125]:16]";
"Graph::MST_Prim" -> "Graph::Undirected::new";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@20";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::import";
"Graph::AdjacencyMap::Light::set_path" -> "Graph::AdjacencyMap::Light::CORE:sort";
"Moose::Util::TypeConstraints::create_class_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::add_type_constraint";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::add_type_constraint";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Meta::TypeConstraint::Registry::add_type_constraint";
"Moose::Util::TypeConstraints::create_role_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::add_type_constraint";
"Moose::Util::TypeConstraints::find_or_parse_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::add_type_constraint";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_399::__ANON__[(eval 569)[Eval/Closure.pm:125]:16]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_304::__ANON__[(eval 447)[Eval/Closure.pm:125]:26]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@19";
"Bio::Roary::PostAnalysis::new" -> "Eval::Closure::Sandbox_388::CORE:match";
"Graph::AdjacencyMap::Light::BEGIN@15" -> "Graph::AdjacencyMap::Vertex::BEGIN@13";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@178";
"Moose::Meta::Attribute::_inline_set_value" -> "Moose::Meta::Attribute::_writer_value_needs_copy";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:159]" -> "Sub::Exporter::_setup";
"DynaLoader::bootstrap" -> "Sub::Name::bootstrap";
"Module::Runtime::require_module" -> "Package::Stash::XS::BEGIN@8";
"Moose::Meta::Class::BEGIN@16" -> "Moose::Meta::Method::Constructor::BEGIN@4";
"Graph::AdjacencyMap::_successors" -> "Graph::AdjacencyMap::Light::_get_id_path";
"Graph::edges05" -> "Graph::AdjacencyMap::Light::_get_id_path";
"Graph::set_edge_attribute" -> "Graph::AdjacencyMap::_set_path_attr";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@10";
"Moose::Util::TypeConstraints::find_or_parse_type_constraint" -> "Moose::Util::TypeConstraints::_detect_parameterized_type_constraint";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@21";
"Bio::PrimarySeqI::BEGIN@124" -> "Bio::Tools::CodonTable::BEGIN@185";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::has_reader";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::has_reader";
"Moose::Meta::Role::Application::ToClass::check_required_methods" -> "Moose::Meta::Role::get_required_method_list";
"Bio::Root::Root::BEGIN@146" -> "Error::BEGIN@14";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_431::__ANON__[(eval 601)[Eval/Closure.pm:125]:16]";
"Text::CSV::_load_pp" -> "Text::CSV_PP::BEGIN@119";
"File::Temp::BEGIN@17" -> "Errno::TIEHASH";
"Class::MOP::Class::invalidate_meta_instances" -> "Class::MOP::Class::invalidate_meta_instance";
"constant::BEGIN@25" -> "utf8::AUTOLOAD";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::_create_getline_subs";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@2";
"Graph::Traversal::next" -> "Graph::__ANON__[Graph.pm:2741]";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@39";
"Bio::Root::Root::BEGIN@146" -> "Clone::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@18";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_244::__ANON__[(eval 370)[Eval/Closure.pm:125]:12]";
"File::Grep::BEGIN@8" -> "File::Grep::CORE:match";
"Exception::Class::_make_subclass" -> "Exception::Class::CORE:subst";
"Moose::Meta::TypeConstraint::Parameterizable::parameterize" -> "Moose::Meta::TypeConstraint::Parameterizable::_parse_type_parameter";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_432::__ANON__[(eval 602)[Eval/Closure.pm:125]:21]";
"parent::import" -> "Class::MOP::Method::BEGIN@7";
"Graph::BEGIN@86" -> "Graph::Attribute::BEGIN@14";
"base::import" -> "Bio::Location::SplitLocationI::BEGIN@84";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_324::__ANON__[(eval 467)[Eval/Closure.pm:125]:9]";
"Graph::_heap_walk" -> "Graph::_MST_add";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_184::__ANON__[(eval 215)[Eval/Closure.pm:125]:22]";
"Data::OptList::BEGIN@10" -> "DynaLoader::BEGIN@18";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_317::__ANON__[(eval 460)[Eval/Closure.pm:125]:12]";
"vars::import" -> "vars::CORE:match";
"Bio::Roary::PostAnalysis::_annotate_groups_obj" -> "Bio::Roary::PostAnalysis::_build__annotate_groups_obj";
"Class::MOP::Class::_inline_init_attr_from_default" -> "Class::MOP::Attribute::_inline_set_value";
"Class::MOP::Class::_inline_init_attr_from_constructor" -> "Class::MOP::Attribute::_inline_set_value";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Attribute::_inline_set_value";
"Moose::Meta::Attribute::_inline_set_value" -> "Class::MOP::Attribute::_inline_set_value";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@32";
"Moose::Util::TypeConstraints::BEGIN@34" -> "Moose::Meta::TypeConstraint::Registry::meta";
"Moose::Meta::TypeConstraint::BEGIN@6" -> "metaclass::BEGIN@8";
"Bio::Roary::OrderGenes::groups_to_contigs" -> "Bio::Roary::OrderGenes::_build_groups_to_contigs";
"Class::MOP::Package::BEGIN@8" -> "Devel::GlobalDestruction::BEGIN@23";
"overload::OVERLOAD" -> "overload::CORE:match";
"base::import" -> "Bio::Location::FuzzyLocationI::BEGIN@76";
"Moose::Meta::Class::BEGIN@17" -> "Moose::Meta::Method::Destructor::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_309::__ANON__[(eval 452)[Eval/Closure.pm:125]:139]";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::Builtins::subtype";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::TypeConstraint::Parameterized::_inline_check";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Moose::Meta::TypeConstraint::Parameterized::_inline_check";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_294::__ANON__[(eval 420)[Eval/Closure.pm:125]:13]";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@13";
"Moose::Util::TypeConstraints::role_type" -> "Moose::Util::TypeConstraints::create_role_type_constraint";
"Bio::Roary::JobRunner::Role::BEGIN@12" -> "Moose::Role::import";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::import";
"Bio::Roary::ParseGFFAnnotationRole::BEGIN@10" -> "Moose::Role::import";
"Sub::Exporter::_rewrite_build_config" -> "Sub::Exporter::_key_intersection";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::output_raw_filename_unique_genes";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_293::__ANON__[(eval 419)[Eval/Closure.pm:125]:16]";
"Bio::Root::Root::BEGIN@146" -> "AutoLoader::BEGIN@30";
"Moose::Meta::Method::Accessor::_generate_predicate_method" -> "Class::MOP::Method::Accessor::_generate_predicate_method_inline";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_predicate_method_inline";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@42";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_146::__ANON__[(eval 171)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@38" -> "Moose::Meta::Role::Application::ToInstance::BEGIN@9";
"Graph::_edges" -> "Graph::AdjacencyMap::Light::_get_path_id";
"Graph::_heap_walk" -> "Heap071::Fibonacci::new";
"Bio::LocatableSeq::BEGIN@106" -> "Bio::Location::Fuzzy::BEGIN@82";
"Bio::Roary::GroupLabels::_build__output_fh" -> "Bio::Roary::GroupLabels::output_filename";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_165::__ANON__[(eval 196)[Eval/Closure.pm:125]:9]";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Moose::Meta::TypeConstraint::create_child_type";
"Carp::croak" -> "Carp::shortmess";
"Bio::SeqIO::BEGIN@332" -> "Bio::Tools::GuessSeqFormat::BEGIN@248";
"Moose::Exporter::build_import_methods" -> "Moose::Exporter::_make_import_sub";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::Builtins::where";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@22";
"Moose::Meta::TypeConstraint::Registry::new" -> "Class::MOP::Object::_new";
"Moose::with" -> "Moose::Util::apply_all_roles";
"DynaLoader::bootstrap" -> "DynaLoader::CORE:ftsize";
"Bio::PrimarySeqI::BEGIN@124" -> "Bio::Tools::CodonTable::BEGIN@199";
"Carp::format_arg" -> "Carp::CORE:match";
"Class::MOP::Mixin::HasOverloads::BEGIN@7" -> "Class::MOP::Overload::BEGIN@7";
"Class::MOP::Class::BEGIN@11" -> "Class::MOP::MiniTrait::BEGIN@7";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@97";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_410::__ANON__[(eval 580)[Eval/Closure.pm:125]:192]";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@12";
"Graph::add_vertex" -> "Graph::AdjacencyMap::Light::set_path";
"Graph::add_edge" -> "Graph::AdjacencyMap::Light::set_path";
"Bio::Roary::AnnotateGroups::_split_groups" -> "Bio::Roary::AnnotateGroups::_generate__ids_to_groups";
"Bio::Roary::GroupLabels::add_labels" -> "Bio::Roary::GroupLabels::_input_fh";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@16";
"base::import" -> "Bio::Root::RootI::BEGIN@84";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Storable::BEGIN@53";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@10";
"Try::Tiny::try" -> "Module::Implementation::try {...} ";
"Class::MOP::Class::remove_attribute" -> "Class::MOP::Class::invalidate_meta_instances";
"Class::MOP::Class::_post_add_attribute" -> "Class::MOP::Class::invalidate_meta_instances";
"Moose::Util::TypeConstraints::subtype" -> "Moose::Util::TypeConstraints::_create_type_constraint";
"Moose::Util::TypeConstraints::type" -> "Moose::Util::TypeConstraints::_create_type_constraint";
"Sub::Exporter::default_generator" -> "Sub::Exporter::__ANON__[Sub/Exporter.pm:460]";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@24";
"Graph::BEGIN@32" -> "Graph::TransitiveClosure::BEGIN@9";
"Graph::_check_cache" -> "Graph::Attribute::set_attribute";
"Exception::Class::import" -> "Exception::Class::_make_subclass";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::BEGIN@13";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::has_clearer";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::has_clearer";
"Class::MOP::Class::make_immutable" -> "Class::MOP::Class::_initialize_immutable";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@135";
"Class::MOP::Class::_inline_slot_initializer" -> "Moose::Meta::Class::_inline_init_attr_from_default";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_109::__ANON__[(eval 134)[Eval/Closure.pm:125]:16]";
"Exception::Class::Base::BEGIN@7" -> "Devel::StackTrace::BEGIN@12";
"Graph::add_vertex" -> "Graph::multivertexed";
"Graph::vertices" -> "Graph::multivertexed";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_347::__ANON__[(eval 490)[Eval/Closure.pm:125]:15]";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@22";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_62::__ANON__[(eval 86)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@5";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::GroupLabels::add_labels";
"Class::MOP::Method::Accessor::try {...} " -> "Moose::Meta::Method::Accessor::_compile_code";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_parse_gene_neighbourhood";
"Bio::Roary::CommandLine::RoaryPostAnalysis::group_limit" -> "Eval::Closure::Sandbox_432::CORE:match";
"Graph::Traversal::__ANON__[Graph/Traversal.pm:26]" -> "Graph::Traversal::DFS::see";
"File::Basename::fileparse" -> "File::Basename::CORE:regcomp";
"File::Basename::fileparse_set_fstype" -> "File::Basename::CORE:regcomp";
"Class::MOP::Class::make_immutable" -> "Class::MOP::Class::_rebless_as_immutable";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "POSIX::BEGIN@11";
"Graph::BEGIN@36" -> "Graph::Undirected::BEGIN@4";
"Class::MOP::Method::Constructor::_initialize_body" -> "Class::MOP::Method::Generated::is_inline";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Generated::is_inline";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::Mixin::AttributeCore::is_default_a_coderef";
"Class::MOP::Attribute::new" -> "Class::MOP::Mixin::AttributeCore::is_default_a_coderef";
"Class::MOP::Class::_inline_default_value" -> "Class::MOP::Mixin::AttributeCore::is_default_a_coderef";
"Bio::Root::IO::BEGIN@75" -> "Bio::Root::IO::CORE:match";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@29";
"Graph::_check_cache" -> "Graph::_connected_components_compute";
"Class::MOP::Class::class_precedence_list" -> "Class::MOP::__ANON__";
"Moose::Meta::Role::Application::ToClass::check_role_exclusions" -> "Moose::Meta::Role::get_excluded_roles_list";
"Moose::Exporter::_die_if_cycle_found_in_also_list_for_package" -> "Moose::Exporter::_die_if_also_list_cycles_back_to_existing_stack";
"Moose::Exporter::BEGIN@10" -> "Moose::Util::MetaRole::BEGIN@10";
"Class::MOP::Method::Accessor::_initialize_body" -> "Moose::Meta::Method::Accessor::_generate_predicate_method";
"Bio::Roary::GroupStatistics::_row" -> "POSIX::ceil";
"Graph::vertices" -> "Graph::countvertexed";
"File::Path::BEGIN@6" -> "Cwd::BEGIN@209";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::Class::_new";
"Moose::Meta::Role::get_excluded_roles_list" -> "Moose::Meta::Role::get_excluded_roles_map";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_397::__ANON__[(eval 567)[Eval/Closure.pm:125]:16]";
"Bio::Tools::CodonTable::BEGIN@190" -> "Bio::Tools::IUPAC::BEGIN@168";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_374::__ANON__[(eval 517)[Eval/Closure.pm:125]:13]";
"Class::MOP::Class::add_before_method_modifier" -> "Class::MOP::Method::Wrapped::add_before_modifier";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@22";
"Class::MOP::Method::Generated::BEGIN@7" -> "Eval::Closure::BEGIN@16";
"Eval::Closure::BEGIN@7" -> "Sub::Exporter::BEGIN@217";
"Class::MOP::Package::get_or_add_package_symbol" -> "Package::Stash::XS::get_or_add_symbol";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@15";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_285::__ANON__[(eval 411)[Eval/Closure.pm:125]:4]";
"Bio::Tools::GFF::BEGIN@152" -> "Bio::SeqFeature::Generic::BEGIN@147";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_96::__ANON__[(eval 121)[Eval/Closure.pm:125]:9]";
"Class::MOP::Class::initialize" -> "Class::MOP::Class::_construct_class_instance";
"Eval::Closure::eval_closure" -> "Eval::Closure::_canonicalize_source";
"Moose::Util::TypeConstraints::_detect_type_constraint_union" -> "Moose::Util::TypeConstraints::CORE:regcomp";
"Moose::Util::TypeConstraints::_detect_parameterized_type_constraint" -> "Moose::Util::TypeConstraints::CORE:regcomp";
"Moose::Util::TypeConstraints::_parse_parameterized_type_constraint" -> "Moose::Util::TypeConstraints::CORE:regcomp";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::CORE:regcomp";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18";
"Text::CSV_PP::_combine" -> "Text::CSV_PP::CORE:regcomp";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:157]";
"utf8::AUTOLOAD" -> "utf8::BEGIN@178";
"File::Path::BEGIN@7" -> "File::Basename::BEGIN@52";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@13";
"Graph::multiedged" -> "Graph::AdjacencyMap::Light::_is_MULTI";
"Graph::multivertexed" -> "Graph::AdjacencyMap::Light::_is_MULTI";
"Class::MOP::Class::get_meta_instance" -> "Class::MOP::Class::_create_meta_instance";
"Class::MOP::Package::get_package_symbol" -> "Package::Stash::XS::get_symbol";
"Class::MOP::Mixin::HasMethods::_full_method_map" -> "Class::MOP::Package::list_all_package_symbols";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@5";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::meta";
"Moose::Util::TypeConstraints::BEGIN@34" -> "Moose::Meta::TypeConstraint::Registry::BEGIN@8";
"Moose::Util::TypeConstraints::BEGIN@29" -> "Moose::Meta::TypeConstraint::Role::BEGIN@6";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:40]";
"Moose::Meta::Class::_inline_check_required_attr" -> "Moose::Meta::Class::_inline_throw_exception";
"Moose::Meta::Class::_inline_BUILDARGS" -> "Moose::Meta::Class::_inline_throw_exception";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Moose::Meta::Class::_base_metaclasses";
"Class::MOP::Class::_can_fix_metaclass_incompatibility" -> "Moose::Meta::Class::_base_metaclasses";
"Moose::Meta::Attribute::BEGIN@14" -> "Moose::Meta::Method::Delegation::BEGIN@5";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@29";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_315::__ANON__[(eval 458)[Eval/Closure.pm:125]:13]";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Bio::Roary::ClustersRole::BEGIN@2";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
"Bio::Roary::PostAnalysis::_build__group_labels_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@9";
"Sub::Exporter::_do_import" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:140]";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::BEGIN@19";
"Bio::Tools::GFF::BEGIN@151" -> "Bio::LocatableSeq::BEGIN@103";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@179";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_261::__ANON__[(eval 387)[Eval/Closure.pm:125]:39]";
"strict::import" -> "strict::bits";
"strict::unimport" -> "strict::bits";
"Bio::Roary::OrderGenes::BEGIN@22" -> "strict::bits";
"Text::CSV_PP::print" -> "Text::CSV_PP::_string";
"Bio::Roary::AnalyseGroups::_freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::BEGIN@15";
"File::Spec::Unix::BEGIN@127" -> "constant::import";
"File::Temp::BEGIN@97" -> "constant::import";
"File::Temp::BEGIN@84" -> "constant::import";
"Getopt::Long::BEGIN@234" -> "constant::import";
"File::Spec::Unix::BEGIN@136" -> "constant::import";
"Getopt::Long::BEGIN@237" -> "constant::import";
"File::Temp::BEGIN@96" -> "constant::import";
"Getopt::Long::BEGIN@239" -> "constant::import";
"Class::MOP::Mixin::HasOverloads::BEGIN@50" -> "constant::import";
"File::Temp::BEGIN@95" -> "constant::import";
"Getopt::Long::BEGIN@236" -> "constant::import";
"Data::Dumper::BEGIN@272" -> "constant::import";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::import";
"File::Temp::BEGIN@87" -> "constant::import";
"Getopt::Long::BEGIN@258" -> "constant::import";
"Bio::Tools::CodonTable::BEGIN@199" -> "constant::import";
"File::Spec::Unix::BEGIN@242" -> "constant::import";
"File::Spec::Unix::BEGIN@145" -> "constant::import";
"Getopt::Long::BEGIN@240" -> "constant::import";
"Getopt::Long::BEGIN@233" -> "constant::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@19" -> "constant::import";
"Getopt::Long::BEGIN@247" -> "constant::import";
"Class::MOP::Method::Meta::BEGIN@10" -> "constant::import";
"Getopt::Long::BEGIN@231" -> "constant::import";
"Getopt::Long::BEGIN@229" -> "constant::import";
"File::Spec::Unix::BEGIN@220" -> "constant::import";
"Text::Glob::BEGIN@13" -> "constant::import";
"Getopt::Long::BEGIN@219" -> "constant::import";
"Getopt::Long::BEGIN@248" -> "constant::import";
"File::Temp::BEGIN@91" -> "constant::import";
"Getopt::Long::BEGIN@235" -> "constant::import";
"Module::Runtime::require_module" -> "Bio::Roary::CommandLine::Common::BEGIN@13";
"Moose::BEGIN@10" -> "Carp::BEGIN@4";
"Graph::get_edge_attribute" -> "Graph::_vertex_ids";
"Graph::set_edge_attribute" -> "Graph::_vertex_ids";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@12";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::Parameterized::_new";
"Moose::Meta::Method::Accessor::_generate_clearer_method" -> "Class::MOP::Method::Accessor::_generate_clearer_method_inline";
"Moose::BEGIN@10" -> "Carp::BEGIN@49";
"Graph::BEGIN@42" -> "Safe::BEGIN@28";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@18";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_group_statistics_obj";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_group_statistics_obj";
"Moose::Meta::Role::Attribute::original_role" -> "Moose::Meta::Role::Attribute::_original_role";
"B::Deparse::BEGIN@3914" -> "B::Deparse::CORE:pack";
"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::BEGIN@12";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_26::__ANON__[(eval 50)[Eval/Closure.pm:125]:6]";
"Graph::_heap_walk" -> "AutoLoader::AUTOLOAD";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:131]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_29::__ANON__[(eval 53)[Eval/Closure.pm:125]:55]";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@92";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_74::__ANON__[(eval 99)[Eval/Closure.pm:125]:106]";
"Moose::Exporter::BEGIN@10" -> "Moose::Util::MetaRole::BEGIN@9";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::apply_overloading";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@333";
"Class::MOP::Instance::new" -> "Moose::Meta::Instance::_new";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@184";
"Moose::Meta::Role::_new" -> "Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:398]";
"Module::Implementation::__ANON__[Module/Implementation.pm:44]" -> "Module::Implementation::_load_implementation";
"Package::Stash::BEGIN@17" -> "Module::Implementation::build_loader_sub";
"Moose::BEGIN@12" -> "Module::Implementation::build_loader_sub";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_155::__ANON__[(eval 186)[Eval/Closure.pm:125]:22]";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@18";
"Module::Runtime::require_module" -> "Class::Load::XS::BEGIN@7";
"Class::MOP::Mixin::HasOverloads::BEGIN@9" -> "Devel::OverloadInfo::BEGIN@17";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Moose::Meta::TypeConstraint::can_be_inlined" -> "Moose::Meta::TypeConstraint::can_be_inlined";
"Bio::Roary::AnnotateGroups::reannotate" -> "Bio::Roary::AnnotateGroups::_split_groups";
"Bio::SeqUtils::valid_aa" -> "Bio::SeqUtils::CORE:match";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_195::__ANON__[(eval 296)[Eval/Closure.pm:125]:12]";
"Class::MOP::Method::Accessor::_initialize_body" -> "Moose::Meta::Method::Accessor::_generate_reader_method";
"Graph::Attribute::set_attribute" -> "Graph::Attribute::__ANON__[Graph/Attribute.pm:19]";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::CORE:sort";
"Bio::Roary::GroupStatistics::_files_to_groups" -> "Bio::Roary::GroupStatistics::_build__files_to_groups";
"Getopt::Long::FindOption" -> "Getopt::Long::CORE:regcomp";
"Getopt::Long::GetOptionsFromArray" -> "Getopt::Long::CORE:regcomp";
"File::Find::Rule::BEGIN@6" -> "Text::Glob::BEGIN@2";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@10";
"Class::MOP::Class::_inline_slot_initializer" -> "Class::MOP::Class::_inline_init_attr_from_default";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@16";
"Moose::Meta::Attribute::new" -> "Moose::Meta::Attribute::CORE:sort";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_252::__ANON__[(eval 378)[Eval/Closure.pm:125]:26]";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::Dir::BEGIN@1575";
"Text::CSV::_load_pp" -> "Text::CSV_PP::BEGIN@970";
"Bio::Roary::GroupStatistics::_build__files_to_groups" -> "Bio::Roary::GroupStatistics::_groups_to_files";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::_groups_to_files";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_56::__ANON__[(eval 80)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_144::__ANON__[(eval 169)[Eval/Closure.pm:125]:9]";
"File::Temp::_gettemp" -> "File::Spec::Unix::catdir";
"File::Temp::tempdir" -> "File::Spec::Unix::catdir";
"File::Spec::Unix::catfile" -> "File::Spec::Unix::catdir";
"File::Path::_rmtree" -> "File::Path::CORE:chdir";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_316::__ANON__[(eval 459)[Eval/Closure.pm:125]:26]";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::accessor";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::accessor";
"Moose::Meta::Attribute::install_accessors" -> "Moose::Meta::Mixin::AttributeCore::has_handles";
"Moose::Meta::Attribute::remove_accessors" -> "Moose::Meta::Mixin::AttributeCore::has_handles";
"Package::DeprecationManager::import" -> "Package::DeprecationManager::_build_import";
"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint" -> "Moose::Util::TypeConstraints::get_all_parameterizable_types";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::TypeCoercion::BEGIN@1";
"Moose::Meta::TypeConstraint::Registry::BEGIN@4" -> "strict::import";
"Graph::AdjacencyMap::Heavy::BEGIN@7" -> "strict::import";
"Moose::Exporter::import" -> "strict::import";
"Moose::Meta::Role::Application::ToRole::BEGIN@4" -> "strict::import";
"Bio::Location::Fuzzy::BEGIN@82" -> "strict::import";
"Graph::AdjacencyMap::Light::BEGIN@7" -> "strict::import";
"List::MoreUtils::BEGIN@4" -> "strict::import";
"Moose::BEGIN@1" -> "strict::import";
"File::Path::BEGIN@4" -> "strict::import";
"Moose::Meta::Method::Delegation::BEGIN@4" -> "strict::import";
"Text::CSV::ErrorDiag::BEGIN@1087" -> "strict::import";
"AutoLoader::BEGIN@3" -> "strict::import";
"Bio::Range::BEGIN@89" -> "strict::import";
"Graph::Undirected::BEGIN@5" -> "strict::import";
"File::Basename::BEGIN@50" -> "strict::import";
"mro::BEGIN@10" -> "strict::import";
"Graph::Attribute::BEGIN@3" -> "strict::import";
"Moose::Meta::Mixin::AttributeCore::BEGIN@4" -> "strict::import";
"Class::MOP::Mixin::AttributeCore::BEGIN@4" -> "strict::import";
"Class::MOP::Method::Meta::BEGIN@4" -> "strict::import";
"Bio::Roary::ClustersRole::BEGIN@1" -> "strict::import";
"Graph::AdjacencyMap::Vertex::BEGIN@7" -> "strict::import";
"Moose::Meta::TypeConstraint::Role::BEGIN@4" -> "strict::import";
"Class::MOP::Instance::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::Composite::BEGIN@4" -> "strict::import";
"Eval::Closure::BEGIN@5" -> "strict::import";
"Params::Util::BEGIN@59" -> "strict::import";
"Number::Compare::BEGIN@2" -> "strict::import";
"Graph::Matrix::BEGIN@6" -> "strict::import";
"Graph::SPTHeapElem::BEGIN@3" -> "strict::import";
"Bio::Seq::BEGIN@459" -> "strict::import";
"Bio::Factory::LocationFactoryI::BEGIN@91" -> "strict::import";
"Bio::SeqFeature::Generic::BEGIN@143" -> "strict::import";
"Sub::Install::BEGIN@4" -> "strict::import";
"Graph::TransitiveClosure::Matrix::BEGIN@3" -> "strict::import";
"Class::Load::BEGIN@5" -> "strict::import";
"Bio::AnnotationI::BEGIN@116" -> "strict::import";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@4" -> "strict::import";
"Graph::UnionFind::BEGIN@3" -> "strict::import";
"Bio::DescribableI::BEGIN@67" -> "strict::import";
"Moose::Util::TypeConstraints::import" -> "strict::import";
"Bio::SeqI::BEGIN@111" -> "strict::import";
"Bio::LocationI::BEGIN@75" -> "strict::import";
"Getopt::Long::BEGIN@17" -> "strict::import";
"Graph::BitMatrix::BEGIN@3" -> "strict::import";
"Moose::Meta::TypeConstraint::Class::BEGIN@4" -> "strict::import";
"Moose::Util::MetaRole::BEGIN@4" -> "strict::import";
"Bio::Annotation::Collection::BEGIN@88" -> "strict::import";
"Bio::Factory::ObjectFactoryI::BEGIN@77" -> "strict::import";
"Package::Stash::BEGIN@8" -> "strict::import";
"Bio::Annotation::SimpleValue::BEGIN@76" -> "strict::import";
"Moose::Meta::Role::Method::Conflicting::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::Method::Required::BEGIN@4" -> "strict::import";
"vars::BEGIN@8" -> "strict::import";
"Bio::AnnotationCollectionI::BEGIN@132" -> "strict::import";
"File::Copy::BEGIN@11" -> "strict::import";
"Class::MOP::Class::Immutable::Trait::BEGIN@4" -> "strict::import";
"Moose::Meta::Class::Immutable::Trait::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::Application::BEGIN@4" -> "strict::import";
"POSIX::BEGIN@2" -> "strict::import";
"Fcntl::BEGIN@58" -> "strict::import";
"Config::BEGIN@9" -> "strict::import";
"IO::Handle::BEGIN@261" -> "strict::import";
"File::Spec::Unix::BEGIN@3" -> "strict::import";
"Devel::StackTrace::BEGIN@7" -> "strict::import";
"Array::Utils::BEGIN@91" -> "strict::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@4" -> "strict::import";
"Bio::SeqIO::BEGIN@327" -> "strict::import";
"Class::Load::BEGIN@1" -> "strict::import";
"Graph::Traversal::DFS::BEGIN@3" -> "strict::import";
"Moose::Meta::Role::Application::ToClass::BEGIN@4" -> "strict::import";
"Bio::Tools::IUPAC::BEGIN@168" -> "strict::import";
"Class::MOP::Mixin::HasAttributes::BEGIN@4" -> "strict::import";
"Moose::Meta::TypeCoercion::Union::BEGIN@4" -> "strict::import";
"Class::MOP::MiniTrait::BEGIN@4" -> "strict::import";
"parent::BEGIN@2" -> "strict::import";
"Bio::Factory::SequenceStreamI::BEGIN@78" -> "strict::import";
"Graph::AdjacencyMatrix::BEGIN@3" -> "strict::import";
"Try::Tiny::BEGIN@9" -> "strict::import";
"Sub::Name::BEGIN@44" -> "strict::import";
"Sub::Exporter::Progressive::BEGIN@3" -> "strict::import";
"Sub::Identify::BEGIN@3" -> "strict::import";
"Scalar::Util::BEGIN@9" -> "strict::import";
"File::Find::BEGIN@3" -> "strict::import";
"Bio::Location::Atomic::BEGIN@77" -> "strict::import";
"Bio::DB::SeqI::BEGIN@79" -> "strict::import";
"File::Find::BEGIN@349" -> "strict::import";
"Class::MOP::Deprecated::BEGIN@4" -> "strict::import";
"File::Grep::BEGIN@5" -> "strict::import";
"Class::MOP::Mixin::HasMethods::BEGIN@4" -> "strict::import";
"Heap071::Elem::BEGIN@3" -> "strict::import";
"Package::DeprecationManager::BEGIN@6" -> "strict::import";
"Bio::Annotation::TypeManager::BEGIN@80" -> "strict::import";
"Opcode::BEGIN@5" -> "strict::import";
"Class::MOP::Attribute::BEGIN@4" -> "strict::import";
"Clone::BEGIN@3" -> "strict::import";
"Bio::PrimarySeq::BEGIN@128" -> "strict::import";
"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@4" -> "strict::import";
"Class::MOP::Method::Constructor::BEGIN@4" -> "strict::import";
"Bio::Location::CoordinatePolicyI::BEGIN@84" -> "strict::import";
"Devel::StackTrace::Frame::BEGIN@3" -> "strict::import";
"Bio::Factory::SequenceFactoryI::BEGIN@86" -> "strict::import";
"Bio::IdentifiableI::BEGIN@93" -> "strict::import";
"Bio::SeqAnalysisParserI::BEGIN@91" -> "strict::import";
"Class::MOP::Method::Generated::BEGIN@4" -> "strict::import";
"base::BEGIN@3" -> "strict::import";
"Text::CSV_PP::BEGIN@10" -> "strict::import";
"Moose::Meta::Class::BEGIN@4" -> "strict::import";
"Moose::Meta::TypeConstraint::Enum::BEGIN@4" -> "strict::import";
"Module::Implementation::BEGIN@6" -> "strict::import";
"IO::BEGIN@7" -> "strict::import";
"Devel::GlobalDestruction::BEGIN@3" -> "strict::import";
"Moose::Exporter::BEGIN@4" -> "strict::import";
"Class::MOP::Method::Wrapped::BEGIN@4" -> "strict::import";
"Bio::SeqFeatureI::BEGIN@98" -> "strict::import";
"Devel::OverloadInfo::BEGIN@14" -> "strict::import";
"Bio::Factory::FTLocationFactory::BEGIN@93" -> "strict::import";
"Bio::LocatableSeq::BEGIN@103" -> "strict::import";
"Bio::Tools::CodonTable::BEGIN@187" -> "strict::import";
"Bio::FeatureHolderI::BEGIN@95" -> "strict::import";
"Bio::Tools::GuessSeqFormat::BEGIN@247" -> "strict::import";
"Bio::Location::SplitLocationI::BEGIN@80" -> "strict::import";
"Errno::BEGIN@9" -> "strict::import";
"Moose::Meta::Method::BEGIN@4" -> "strict::import";
"Moose::Meta::Instance::BEGIN@4" -> "strict::import";
"File::Find::Rule::BEGIN@4" -> "strict::import";
"Moose::Meta::TypeConstraint::Union::BEGIN@4" -> "strict::import";
"Class::MOP::Mixin::BEGIN@4" -> "strict::import";
"Graph::MSTHeapElem::BEGIN@3" -> "strict::import";
"Moose::Meta::Method::Constructor::BEGIN@4" -> "strict::import";
"Moose::Util::TypeConstraints::Builtins::BEGIN@4" -> "strict::import";
"Heap071::Fibonacci::BEGIN@3" -> "strict::import";
"Package::Stash::XS::BEGIN@8" -> "strict::import";
"Exception::Class::Base::BEGIN@3" -> "strict::import";
"Carp::BEGIN@4" -> "strict::import";
"Class::Data::Inheritable::BEGIN@3" -> "strict::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@1" -> "strict::import";
"Bio::Root::IO::BEGIN@3" -> "strict::import";
"Class::MOP::BEGIN@4" -> "strict::import";
"Bio::RangeI::BEGIN@91" -> "strict::import";
"Moose::import" -> "strict::import";
"Safe::BEGIN@28" -> "strict::import";
"Bio::Root::Exception::BEGIN@2" -> "strict::import";
"Bio::Seq::SeqFactory::BEGIN@80" -> "strict::import";
"Bio::SeqUtils::BEGIN@189" -> "strict::import";
"Bio::Location::WidestCoordPolicy::BEGIN@77" -> "strict::import";
"Bio::Root::Root::BEGIN@2" -> "strict::import";
"B::Deparse::BEGIN@24" -> "strict::import";
"Graph::Traversal::BEGIN@3" -> "strict::import";
"Class::MOP::Class::BEGIN@4" -> "strict::import";
"Graph::AdjacencyMap::BEGIN@3" -> "strict::import";
"Error::BEGIN@14" -> "strict::import";
"File::Temp::BEGIN@10" -> "strict::import";
"Class::Load::XS::BEGIN@6" -> "strict::import";
"Moose::Meta::Method::Accessor::BEGIN@4" -> "strict::import";
"Moose::Meta::TypeConstraint::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::Attribute::BEGIN@4" -> "strict::import";
"utf8::BEGIN@2" -> "strict::import";
"MRO::Compat::BEGIN@2" -> "strict::import";
"Moose::Meta::Method::Meta::BEGIN@4" -> "strict::import";
"Moose::Meta::TypeCoercion::BEGIN@4" -> "strict::import";
"Class::MOP::Overload::BEGIN@4" -> "strict::import";
"Class::MOP::Module::BEGIN@4" -> "strict::import";
"Moose::Object::BEGIN@4" -> "strict::import";
"Text::CSV::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::BEGIN@4" -> "strict::import";
"Bio::Tools::GFF::BEGIN@148" -> "strict::import";
"Bio::AnnotatableI::BEGIN@84" -> "strict::import";
"Cwd::BEGIN@170" -> "strict::import";
"Moose::Meta::Method::Overridden::BEGIN@4" -> "strict::import";
"Class::MOP::Method::BEGIN@4" -> "strict::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@4" -> "strict::import";
"Eval::Closure::BEGIN@2" -> "strict::import";
"Class::MOP::Object::BEGIN@4" -> "strict::import";
"B::BEGIN@9" -> "strict::import";
"Bio::Location::Simple::BEGIN@85" -> "strict::import";
"List::Util::BEGIN@9" -> "strict::import";
"Graph::BEGIN@3" -> "strict::import";
"constant::BEGIN@3" -> "strict::import";
"Class::MOP::Mixin::HasOverloads::BEGIN@4" -> "strict::import";
"Text::Glob::BEGIN@2" -> "strict::import";
"File::Spec::BEGIN@3" -> "strict::import";
"Graph::TransitiveClosure::BEGIN@3" -> "strict::import";
"File::Temp::Dir::BEGIN@1575" -> "strict::import";
"Moose::Meta::Method::Augmented::BEGIN@4" -> "strict::import";
"IO::Seekable::BEGIN@99" -> "strict::import";
"Bio::DB::InMemoryCache::BEGIN@73" -> "strict::import";
"Exception::Class::BEGIN@7" -> "strict::import";
"Bio::Root::RootI::BEGIN@2" -> "strict::import";
"Moose::Meta::Role::Method::BEGIN@4" -> "strict::import";
"Bio::Location::FuzzyLocationI::BEGIN@76" -> "strict::import";
"re::BEGIN@4" -> "strict::import";
"Moose::Meta::Method::Destructor::BEGIN@4" -> "strict::import";
"Bio::Seq::SeqBuilder::BEGIN@128" -> "strict::import";
"Bio::DB::RandomAccessI::BEGIN@64" -> "strict::import";
"Bio::PrimarySeqI::BEGIN@123" -> "strict::import";
"Sub::Exporter::Progressive::BEGIN@23" -> "strict::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@4" -> "strict::import";
"metaclass::BEGIN@4" -> "strict::import";
"Moose::Role::import" -> "strict::import";
"Moose::Meta::TypeCoercion::BEGIN@1" -> "strict::import";
"Bio::Factory::ObjectBuilderI::BEGIN@95" -> "strict::import";
"Moose::Deprecated::BEGIN@4" -> "strict::import";
"Class::MOP::Method::Accessor::BEGIN@4" -> "strict::import";
"Class::MOP::Method::Inlined::BEGIN@4" -> "strict::import";
"Exporter::Heavy::BEGIN@3" -> "strict::import";
"Moose::Util::BEGIN@4" -> "strict::import";
"Class::MOP::Package::BEGIN@4" -> "strict::import";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::_contains_paralogs";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_contains_paralogs";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_404::__ANON__[(eval 574)[Eval/Closure.pm:125]:26]";
"parent::import" -> "Class::MOP::Package::BEGIN@4";
"base::import" -> "Bio::Factory::ObjectFactoryI::BEGIN@80";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@13";
"AutoLoader::find_filename" -> "AutoLoader::CORE:substcont";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@239";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@9";
"Moose::Meta::Attribute::_process_lazy_build_option" -> "Moose::Meta::Attribute::CORE:match";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Text::CSV_PP::print";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_47::__ANON__[(eval 71)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@9";
"Safe::BEGIN@46" -> "Opcode::BEGIN@13";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_45::__ANON__[(eval 69)[Eval/Closure.pm:125]:4]";
"Class::MOP::Class::_rebless_as_immutable" -> "Class::MOP::Class::_immutable_metaclass";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::GroupStatistics::_output_fh";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@104";
"base::import" -> "Bio::DB::RandomAccessI::BEGIN@68";
"Bio::Root::Root::BEGIN@146" -> "Error::BEGIN@46";
"Moose::Meta::TypeConstraint::inline_environment" -> "Moose::Meta::TypeConstraint::_inline_environment";
"Bio::Roary::AnnotateGroups::_split_groups" -> "Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names";
"Bio::SeqUtils::BEGIN@585" -> "Bio::Range::BEGIN@89";
"Class::Load::BEGIN@8" -> "Data::OptList::BEGIN@4";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@36";
"Bio::Roary::GroupStatistics::_build__sorted_file_names" -> "Bio::Roary::GroupStatistics::analyse_groups_obj";
"Bio::Roary::GroupStatistics::_build__groups_to_files" -> "Bio::Roary::GroupStatistics::analyse_groups_obj";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::GroupStatistics::analyse_groups_obj";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::analyse_groups_obj";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::BEGIN@8";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@23";
"main::RUNTIME" -> "File::Temp::END";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::import";
"Moose::Meta::TypeConstraint::Parameterized::_inline_check" -> "Moose::Meta::TypeConstraint::Parameterizable::generate_inline_for";
"Sub::Exporter::Progressive::__ANON__[Sub/Exporter/Progressive.pm:40]" -> "Sub::Exporter::Progressive::CORE:subst";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@127";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:499]";
"Moose::Meta::Attribute::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:499]";
"Class::MOP::Mixin::HasMethods::BEGIN@7" -> "Class::MOP::Method::Meta::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_435::__ANON__[(eval 605)[Eval/Closure.pm:125]:9]";
"Moose::Exporter::_make_sub_exporter_params" -> "Moose::Exporter::CORE:match";
"Bio::Tools::CodonTable::BEGIN@191" -> "Bio::SeqUtils::BEGIN@192";
"Opcode::_init_optags" -> "Opcode::CORE:match";
"Data::OptList::BEGIN@10" -> "Params::Util::BEGIN@59";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@29";
"Data::OptList::mkopt" -> "Data::OptList::__ANON__[Data/OptList.pm:54]";
"DynaLoader::BEGIN@22" -> "version::(bool";
"Moose::Meta::Attribute::_inline_init_from_default" -> "Moose::Meta::Attribute::_inline_init_slot";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@9";
"Sub::Install::BEGIN@139" -> "Sub::Install::CORE:qr";
"Sub::Install::BEGIN@148" -> "Sub::Install::CORE:qr";
"Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:open";
"Graph::BEGIN@42" -> "utf8::upgrade";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_369::__ANON__[(eval 512)[Eval/Closure.pm:125]:13]";
"base::import" -> "Bio::LocationI::BEGIN@75";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@33";
"Carp::caller_info" -> "Carp::get_subname";
"Moose::Meta::Attribute::_inline_set_value" -> "Moose::Meta::Attribute::_inline_tc_code";
"DynaLoader::BEGIN@22" -> "Config::BEGIN@45";
"parent::import" -> "Moose::Meta::Mixin::AttributeCore::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_341::__ANON__[(eval 484)[Eval/Closure.pm:125]:22]";
"Class::MOP::Class::_inline_new_object" -> "Class::MOP::Class::_inline_params";
"base::BEGIN@4" -> "vars::BEGIN@8";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::_mcl_fh";
"Graph::BEGIN@42" -> "Safe::BEGIN@341";
"Moose::Util::_apply_all_roles" -> "Moose::Util::find_meta";
"DynaLoader::bootstrap" -> "DynaLoader::CORE:ftdir";
"Class::MOP::Package::initialize" -> "Class::MOP::store_metaclass_by_name";
"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::store_metaclass_by_name";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@27";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::_header_block";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@12";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@5";
"Try::Tiny::try" -> "Class::MOP::Method::Constructor::try {...} ";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_329::__ANON__[(eval 472)[Eval/Closure.pm:125]:12]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_268::__ANON__[(eval 394)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@15" -> "Class::MOP::Mixin::HasAttributes::BEGIN@4";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::meta";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::BEGIN@3";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "Bio::Roary::SplitGroups::_neighbourhood_size";
"Bio::Roary::AnalyseGroups::new" -> "Bio::Roary::AnalyseGroups::BUILD";
"base::import" -> "Bio::Root::RootI::BEGIN@3";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::meta";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_348::__ANON__[(eval 491)[Eval/Closure.pm:125]:4]";
"Graph::TransitiveClosure::Matrix::BEGIN@5" -> "Graph::AdjacencyMatrix::BEGIN@6";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_coerce_option";
"File::Path::BEGIN@6" -> "Cwd::CORE:fteexec";
"Try::Tiny::try" -> "Class::MOP::Attribute::try {...} ";
"File::Find::Rule::BEGIN@9" -> "File::Find::BEGIN@349";
"Moose::Exporter::build_import_methods" -> "Class::MOP::Package::initialize";
"Moose::Meta::Role::initialize" -> "Class::MOP::Package::initialize";
"Bio::Roary::AnnotateGroups::new" -> "Bio::Roary::AnnotateGroups::__ANON__[lib/Bio/Roary/AnnotateGroups.pm:31]";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@4";
"Safe::BEGIN@46" -> "XSLoader::load";
"Moose::BEGIN@9" -> "XSLoader::load";
"Bio::Root::IO::BEGIN@7" -> "XSLoader::load";
"Data::Dumper::BEGIN@24" -> "XSLoader::load";
"File::Copy::BEGIN@13" -> "XSLoader::load";
"B::BEGIN@17" -> "XSLoader::load";
"IO::Handle::BEGIN@266" -> "XSLoader::load";
"Module::Runtime::require_module" -> "XSLoader::load";
"Moose::Exporter::BEGIN@8" -> "XSLoader::load";
"Moose::Util::TypeConstraints::BEGIN@621" -> "XSLoader::load";
"MRO::Compat::BEGIN@10" -> "XSLoader::load";
"Bio::Roary::OrderGenes::BEGIN@22" -> "XSLoader::load";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "XSLoader::load";
"Sub::Identify::BEGIN@6" -> "XSLoader::load";
"Bio::Root::Root::BEGIN@146" -> "Clone::BEGIN@3";
"Class::MOP::Attribute::try {...} " -> "Moose::Meta::Method::Accessor::new";
"Moose::with" -> "Moose::with";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Moose::with";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Moose::with";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Moose::with";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Moose::with";
"Graph::BEGIN@35" -> "Graph::SPTHeapElem::BEGIN@4";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@6";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@691";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@18";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_split_groups";
"Class::MOP::Class::_inline_new_object" -> "Moose::Meta::Class::_inline_params";
"Exception::Class::_make_subclass" -> "Bio::Roary::Exceptions::FileNotFound::BEGIN@3";
"parent::import" -> "Class::MOP::Method::Generated::BEGIN@5";
"Moose::Meta::Attribute::new" -> "Moose::Meta::Attribute::_process_options";
"Bio::SeqFeatureI::BEGIN@99" -> "Bio::DB::InMemoryCache::BEGIN@75";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::OrderGenes::new";
"Bio::Roary::GroupStatistics::_build__sorted_file_names" -> "Bio::Roary::GroupStatistics::CORE:sort";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::GroupStatistics::CORE:sort";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_235::__ANON__[(eval 352)[Eval/Closure.pm:125]:26]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_429::__ANON__[(eval 599)[Eval/Closure.pm:125]:16]";
"Class::MOP::Package::BEGIN@8" -> "Devel::GlobalDestruction::BEGIN@3";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@4";
"base::import" -> "Bio::Factory::ObjectBuilderI::BEGIN@96";
"Try::Tiny::BEGIN@18" -> "Try::Tiny::BEGIN@1";
"Graph::BEGIN@34" -> "Graph::MSTHeapElem::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_321::__ANON__[(eval 464)[Eval/Closure.pm:125]:26]";
"Bio::Roary::SplitGroups::_pre_filter_fasta_files" -> "Bio::Roary::SplitGroups::CORE:system";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@4";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_input_cd_hit_groups_file";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_300::__ANON__[(eval 443)[Eval/Closure.pm:125]:4]";
"base::import" -> "Bio::Location::SplitLocationI::BEGIN@80";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Storable::BEGIN@23";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_238::__ANON__[(eval 355)[Eval/Closure.pm:125]:126]";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::CORE:print";
"Moose::BEGIN@43" -> "Class::MOP::Class::find_method_by_name";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Class::find_method_by_name";
"Moose::Meta::Class::_inline_BUILDARGS" -> "Class::MOP::Class::find_method_by_name";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Class::MOP::Class::find_method_by_name";
"Moose::Meta::Method::Destructor::is_needed" -> "Class::MOP::Class::find_method_by_name";
"Moose::Deprecated::BEGIN@7" -> "Package::DeprecationManager::BEGIN@10";
"Graph::BEGIN@34" -> "Graph::MSTHeapElem::BEGIN@3";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_320::__ANON__[(eval 463)[Eval/Closure.pm:125]:22]";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@14";
"Class::MOP::Class::_inline_new_object" -> "Moose::Meta::Class::_inline_extra_init";
"Bio::Roary::Output::EmblGroups::_build__output_header_fh" -> "Bio::Roary::Output::EmblGroups::CORE:open";
"Bio::Roary::Output::EmblGroups::_build__output_fh" -> "Bio::Roary::Output::EmblGroups::CORE:open";
"Moose::Meta::TypeConstraint::Parameterized::_new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
"Moose::Meta::TypeConstraint::Parameterizable::_new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
"Moose::Meta::TypeConstraint::_new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
"Moose::Meta::TypeConstraint::Role::_new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
"Moose::Meta::TypeConstraint::Class::_new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:89]";
"Eval::Closure::BEGIN@7" -> "Eval::Closure::BEGIN@3";
"Exception::Class::Base::BEGIN@6" -> "Class::Data::Inheritable::BEGIN@3";
"DynaLoader::bootstrap" -> "List::MoreUtils::bootstrap";
"Graph::AdjacencyMap::Heavy::set_path" -> "Graph::AdjacencyMap::Heavy::__set_path";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@621";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@10";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::BEGIN@137";
"Class::MOP::Class::BEGIN@9" -> "Class::MOP::Method::Accessor::BEGIN@8";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@18";
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"Bio::Roary::Output::EmblGroups::_sorted_file_names" -> "UNIVERSAL::can";
"Bio::Roary::SplitGroups::_analyse_groups_obj" -> "UNIVERSAL::can";
"Bio::Roary::GroupStatistics::_groups_to_files" -> "UNIVERSAL::can";
"Moose::Util::TypeConstraints::_create_parameterized_type_constraint" -> "UNIVERSAL::can";
"Moose::Meta::Class::_eval_environment" -> "UNIVERSAL::can";
"Bio::Roary::GeneNamesFromGFF::_awk_filter" -> "UNIVERSAL::can";
"Moose::Role::import" -> "UNIVERSAL::can";
"Bio::Roary::OrderGenes::number_of_files" -> "UNIVERSAL::can";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "UNIVERSAL::can";
"Bio::Roary::PostAnalysis::_split_groups_obj" -> "UNIVERSAL::can";
"Bio::Roary::GroupLabels::_output_fh" -> "UNIVERSAL::can";
"Bio::Roary::Output::EmblGroups::_groups_to_files" -> "UNIVERSAL::can";
"Bio::Roary::ClustersRole::_build__clusters_fh" -> "Bio::Roary::InflateClusters::clusters_filename";
"Moose::Exporter::_remove_keywords" -> "Moose::Exporter::_export_is_flagged";
"Moose::Exporter::_make_sub_exporter_params" -> "Moose::Exporter::_make_wrapped_sub_with_meta";
"Class::MOP::Class::_inline_new_object" -> "Class::MOP::Class::_inline_extra_init";
"Moose::Meta::Class::_base_metaclasses" -> "Moose::Meta::Class::CORE:subst";
"base::import" -> "Bio::SeqAnalysisParserI::BEGIN@93";
"Bio::IdentifiableI::BEGIN@96" -> "base::import";
"Bio::Seq::BEGIN@464" -> "base::import";
"Bio::Roary::Exceptions::FileNotFound::BEGIN@3" -> "base::import";
"Bio::Factory::ObjectFactoryI::BEGIN@80" -> "base::import";
"Bio::Tools::IUPAC::BEGIN@169" -> "base::import";
"Bio::Factory::LocationFactoryI::BEGIN@94" -> "base::import";
"Bio::Seq::SeqBuilder::BEGIN@133" -> "base::import";
"Bio::Location::CoordinatePolicyI::BEGIN@86" -> "base::import";
"Graph::AdjacencyMatrix::BEGIN@8" -> "base::import";
"Exception::Class::Base::BEGIN@10" -> "base::import";
"Graph::Traversal::DFS::BEGIN@6" -> "base::import";
"Graph::AdjacencyMap::Heavy::BEGIN@13" -> "base::import";
"Graph::Undirected::BEGIN@4" -> "base::import";
"Graph::MSTHeapElem::BEGIN@7" -> "base::import";
"Bio::DescribableI::BEGIN@70" -> "base::import";
"Bio::DB::RandomAccessI::BEGIN@68" -> "base::import";
"Bio::Tools::CodonTable::BEGIN@193" -> "base::import";
"Bio::Range::BEGIN@94" -> "base::import";
"Bio::Location::Fuzzy::BEGIN@84" -> "base::import";
"Bio::Seq::SeqFactory::BEGIN@83" -> "base::import";
"Bio::Location::FuzzyLocationI::BEGIN@78" -> "base::import";
"Graph::AdjacencyMap::Light::BEGIN@10" -> "base::import";
"Bio::LocationI::BEGIN@79" -> "base::import";
"Graph::SPTHeapElem::BEGIN@7" -> "base::import";
"Bio::Annotation::SimpleValue::BEGIN@82" -> "base::import";
"Bio::Annotation::Collection::BEGIN@96" -> "base::import";
"Bio::Tools::GFF::BEGIN@154" -> "base::import";
"Bio::DB::InMemoryCache::BEGIN@77" -> "base::import";
"Bio::Location::SplitLocationI::BEGIN@84" -> "base::import";
"Bio::PrimarySeq::BEGIN@133" -> "base::import";
"Bio::LocatableSeq::BEGIN@120" -> "base::import";
"Graph::AdjacencyMap::Vertex::BEGIN@13" -> "base::import";
"Bio::Roary::Exceptions::CouldntWriteToFile::BEGIN@3" -> "base::import";
"Bio::Factory::SequenceFactoryI::BEGIN@88" -> "base::import";
"Bio::RangeI::BEGIN@96" -> "base::import";
"Bio::AnnotationCollectionI::BEGIN@137" -> "base::import";
"Bio::SeqFeature::Generic::BEGIN@151" -> "base::import";
"Bio::Root::Root::BEGIN@5" -> "base::import";
"Bio::Tools::GuessSeqFormat::BEGIN@251" -> "base::import";
"Bio::PrimarySeqI::BEGIN@126" -> "base::import";
"Sub::Name::BEGIN@49" -> "base::import";
"Bio::SeqAnalysisParserI::BEGIN@93" -> "base::import";
"Bio::AnnotatableI::BEGIN@86" -> "base::import";
"Bio::Factory::FTLocationFactory::BEGIN@102" -> "base::import";
"Bio::Annotation::TypeManager::BEGIN@86" -> "base::import";
"Bio::Factory::ObjectBuilderI::BEGIN@98" -> "base::import";
"Bio::Location::WidestCoordPolicy::BEGIN@80" -> "base::import";
"Bio::SeqFeatureI::BEGIN@109" -> "base::import";
"Bio::AnnotationI::BEGIN@120" -> "base::import";
"Bio::Location::Atomic::BEGIN@81" -> "base::import";
"Graph::TransitiveClosure::BEGIN@9" -> "base::import";
"Bio::Root::IO::BEGIN@8" -> "base::import";
"Bio::DB::SeqI::BEGIN@81" -> "base::import";
"Class::Load::BEGIN@7" -> "base::import";
"Moose::Meta::TypeConstraint::BEGIN@18" -> "base::import";
"Bio::SeqI::BEGIN@116" -> "base::import";
"Bio::Location::Simple::BEGIN@87" -> "base::import";
"Bio::Location::Split::BEGIN@101" -> "base::import";
"Bio::FeatureHolderI::BEGIN@98" -> "base::import";
"Sub::Name::BEGIN@50" -> "base::import";
"Bio::Factory::SequenceStreamI::BEGIN@80" -> "base::import";
"Moose::Meta::Class::BEGIN@17" -> "Moose::Meta::Method::Destructor::BEGIN@7";
"Package::DeprecationManager::import" -> "Params::Util::_HASH0";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@14";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@36";
"Bio::Root::IO::BEGIN@4" -> "Symbol::BEGIN@81";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@6";
"base::import" -> "Bio::Root::Root::BEGIN@2";
"Graph::BEGIN@13" -> "Graph::AdjacencyMap::BEGIN@3";
"Moose::Util::TypeConstraints::create_class_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Util::TypeConstraints::create_parameterized_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Util::TypeConstraints::find_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Util::TypeConstraints::create_role_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::get_type_constraint";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@11";
"Sub::Exporter::_expand_groups" -> "Sub::Exporter::_group_name";
"Sub::Exporter::_expand_group" -> "Sub::Exporter::_group_name";
"Moose::Meta::Role::_new" -> "Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:84]";
"Moose::before" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
"Moose::with" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
"Moose::Role::has" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
"Moose::extends" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
"Moose::has" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:252]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_389::__ANON__[(eval 532)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Role::BEGIN@11" -> "Moose::Meta::Role::Attribute::BEGIN@4";
"Bio::Roary::AnnotateGroups::_builder__groups_to_id_names" -> "Bio::Roary::AnnotateGroups::CORE:readline";
"Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:284]";
"Moose::Meta::Class::BEGIN@18" -> "Moose::Meta::Method::Meta::BEGIN@4";
"Moose::BEGIN@10" -> "Carp::BEGIN@555";
"Moose::Util::TypeConstraints::BEGIN@25" -> "Moose::Meta::TypeConstraint::Union::BEGIN@6";
"Moose::Meta::Class::_inline_check_required_attr" -> "Moose::Meta::Mixin::AttributeCore::is_required";
"Moose::Meta::Attribute::_inline_check_required" -> "Moose::Meta::Mixin::AttributeCore::is_required";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_53::__ANON__[(eval 77)[Eval/Closure.pm:125]:4]";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::meta";
"Moose::Util::TypeConstraints::import" -> "Moose::Exporter::_strip_metaclass";
"Moose::import" -> "Moose::Exporter::_strip_metaclass";
"Moose::Role::import" -> "Moose::Exporter::_strip_metaclass";
"Bio::SeqIO::BEGIN@331" -> "Bio::Seq::SeqBuilder::BEGIN@133";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Bio::Roary::Output::EmblGroups::_header_block" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Bio::Roary::AnnotateGroups::reannotate" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Bio::Roary::AnnotateGroups::_split_groups" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::AnnotateGroups::_groups_to_consensus_gene_names";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_59::__ANON__[(eval 83)[Eval/Closure.pm:125]:4]";
"AutoLoader::find_filename" -> "AutoLoader::CORE:match";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@227";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::clearer";
"Opcode::_init_optags" -> "Opcode::CORE:readline";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@13";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_44::__ANON__[(eval 68)[Eval/Closure.pm:125]:4]";
"Graph::add_weighted_edge" -> "Graph::is_compat02";
"Graph::edges" -> "Graph::is_compat02";
"Graph::vertices" -> "Graph::is_compat02";
"Graph::unique_vertices" -> "Graph::is_compat02";
"Bio::Roary::AnalyseGroups::BUILD" -> "Bio::Roary::AnalyseGroups::_files_to_genes";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Class::MOP::Mixin::HasMethods::_meta_method_class";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_355::__ANON__[(eval 498)[Eval/Closure.pm:125]:18]";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Moose::Meta::Role::find_method_by_name";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_82::__ANON__[(eval 107)[Eval/Closure.pm:125]:46]";
"Eval::Closure::eval_closure" -> "Eval::Closure::_validate_env";
"Getopt::Long::FindOption" -> "Getopt::Long::CORE:match";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::CORE:match";
"Getopt::Long::ParseOptionSpec" -> "Getopt::Long::CORE:match";
"Getopt::Long::GetOptionsFromArray" -> "Getopt::Long::CORE:match";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_127::__ANON__[(eval 152)[Eval/Closure.pm:125]:9]";
"Exporter::Heavy::_rebuild_cache" -> "Exporter::Heavy::CORE:subst";
"Exporter::Heavy::heavy_export" -> "Exporter::Heavy::CORE:subst";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@13";
"Moose::Meta::Class::_inline_extra_init" -> "Moose::Meta::Class::_inline_BUILDALL";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@3";
"base::import" -> "Bio::RangeI::BEGIN@94";
"Graph::MST_Prim" -> "Graph::expect_undirected";
"Graph::connected_components" -> "Graph::expect_undirected";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@5";
"Moose::Meta::Attribute::_check_associated_methods" -> "Class::MOP::Attribute::associated_methods";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_123::__ANON__[(eval 148)[Eval/Closure.pm:125]:9]";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@11";
"Class::MOP::Class::find_attribute_by_name" -> "Class::MOP::Class::initialize";
"Bio::Roary::ContigsToGeneIDsFromGFF::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::Output::GroupsMultifastasNucleotide::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Method::_new" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Enum::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::class_precedence_list" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Union::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Attribute::_new" -> "Class::MOP::Class::initialize";
"Moose::Meta::Class::initialize" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::find_next_method_by_name" -> "Class::MOP::Class::initialize";
"Class::MOP::Attribute::has_value" -> "Class::MOP::Class::initialize";
"Bio::Roary::SplitGroups::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Application::RoleSummation::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::Output::NumberOfGroups::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Composite::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::CommandLine::RoaryPostAnalysis::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::get_all_attributes" -> "Class::MOP::Class::initialize";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Role::meta" -> "Class::MOP::Class::initialize";
"Moose::BEGIN@43" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeCoercion::Union::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Parameterized::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::AnnotateGroups::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::find_all_methods_by_name" -> "Class::MOP::Class::initialize";
"Bio::Roary::Output::GroupsMultifastaNucleotide::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Class::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Application::ToClass::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::find_method_by_name" -> "Class::MOP::Class::initialize";
"Bio::Roary::InflateClusters::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeCoercion::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::_fix_metaclass_incompatibility" -> "Class::MOP::Class::initialize";
"Bio::Roary::OrderGenes::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Method::_new" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Registry::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Method::Accessor::_new" -> "Class::MOP::Class::initialize";
"Class::MOP::Mixin::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Object::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::PostAnalysis::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Application::ToRole::meta" -> "Class::MOP::Class::initialize";
"metaclass::import" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Application::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::GroupLabels::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::GroupStatistics::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Class::get_all_methods" -> "Class::MOP::Class::initialize";
"Bio::Roary::Output::EmblGroups::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::GeneNamesFromGFF::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::AnalyseGroups::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Attribute::get_raw_value" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::DuckType::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::TypeConstraint::Parameterizable::meta" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Application::ToInstance::meta" -> "Class::MOP::Class::initialize";
"Class::MOP::Package::create" -> "Class::MOP::Class::initialize";
"Moose::Meta::Role::Method::Required::meta" -> "Class::MOP::Class::initialize";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@41";
"Bio::Roary::PostAnalysis::_number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_build__number_of_groups_obj";
"Moose::Meta::Class::BEGIN@14" -> "Moose::Meta::Method::Augmented::BEGIN@4";
"IO::Handle::print" -> "IO::Handle::CORE:print";
"Exporter::import" -> "Exporter::Heavy::heavy_export";
"Class::MOP::Method::Meta::wrap" -> "Class::MOP::Method::Meta::_generate_meta_method";
"Class::MOP::Mixin::HasMethods::_full_method_map" -> "mro::get_pkg_gen";
"Class::MOP::Mixin::HasMethods::update_package_cache_flag" -> "mro::get_pkg_gen";
"Try::Tiny::BEGIN@1" -> "Sub::Name::BEGIN@45";
"Bio::Roary::AnalyseGroups::_builder__groups_to_genes" -> "Bio::Roary::AnalyseGroups::CORE:match";
"base::import" -> "Bio::PrimarySeqI::BEGIN@123";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Method::attach_to_class";
"Bio::Roary::SplitGroups::_make_tmp_dir" -> "Bio::Roary::SplitGroups::_tmp_dir";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:106]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToInstance::meta";
"Moose::BEGIN@38" -> "Moose::Meta::Role::Application::ToInstance::meta";
"Graph::TransitiveClosure::Matrix::BEGIN@5" -> "Graph::AdjacencyMatrix::BEGIN@5";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@26";
"base::BEGIN@4" -> "vars::BEGIN@7";
"Bio::Roary::InflateClusters::_build__output_fh" -> "Bio::Roary::InflateClusters::output_file";
"Class::MOP::Mixin::HasMethods::_code_is_mine" -> "Class::MOP::get_code_info";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::get_code_info";
"Moose::BEGIN@11" -> "Module::Runtime::BEGIN@289";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@14";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::predicate";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_120::__ANON__[(eval 145)[Eval/Closure.pm:125]:25]";
"Moose::Util::TypeConstraints::BEGIN@34" -> "Moose::Meta::TypeConstraint::Registry::BEGIN@4";
"Graph::new" -> "Graph::_opt_get";
"Graph::directed" -> "Graph::AdjacencyMap::_is_UNORD";
"Graph::omniedged" -> "Graph::AdjacencyMap::_is_UNORD";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_395::__ANON__[(eval 565)[Eval/Closure.pm:125]:26]";
"Class::MOP::Class::_inline_slot_initializers" -> "Class::MOP::Class::_inline_slot_initializer";
"Moose::Meta::Class::_inline_slot_initializer" -> "Class::MOP::Class::_inline_slot_initializer";
"DynaLoader::bootstrap" -> "Cwd::bootstrap";
"Graph::BEGIN@42" -> "Safe::BEGIN@334";
"Text::CSV::_load_pp" -> "Text::CSV::ErrorDiag::BEGIN@1087";
"Class::MOP::Method::wrap" -> "Class::MOP::Method::Wrapped::_new";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::_make_tmp_dir";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::BEGIN@9";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@11";
"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@7";
"Graph::BEGIN@35" -> "Graph::SPTHeapElem::BEGIN@7";
"Graph::_heap_walk" -> "Heap071::Fibonacci::extract_top";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_186::__ANON__[(eval 217)[Eval/Closure.pm:125]:13]";
"Graph::_MST_add" -> "Graph::MSTHeapElem::new";
"Exporter::Heavy::BEGIN@197" -> "warnings::unimport";
"utf8::BEGIN@147" -> "warnings::unimport";
"Bio::Root::IO::BEGIN@359" -> "warnings::unimport";
"Moose::Exporter::BEGIN@136" -> "warnings::unimport";
"MRO::Compat::BEGIN@39" -> "warnings::unimport";
"Module::Implementation::BEGIN@114" -> "warnings::unimport";
"Moose::Util::TypeConstraints::BEGIN@674" -> "warnings::unimport";
"Devel::GlobalDestruction::BEGIN@23" -> "warnings::unimport";
"Moose::Util::TypeConstraints::BEGIN@685" -> "warnings::unimport";
"Carp::BEGIN@568" -> "warnings::unimport";
"MRO::Compat::BEGIN@228" -> "warnings::unimport";
"Bio::Root::RootI::BEGIN@242" -> "warnings::unimport";
"Class::MOP::Package::BEGIN@95" -> "warnings::unimport";
"File::Copy::BEGIN@12.1" -> "warnings::unimport";
"Carp::BEGIN@6" -> "warnings::unimport";
"Moose::Util::TypeConstraints::BEGIN@680" -> "warnings::unimport";
"B::Deparse::BEGIN@3653" -> "warnings::unimport";
"utf8::BEGIN@542" -> "warnings::unimport";
"Moose::Util::TypeConstraints::BEGIN@699" -> "warnings::unimport";
"Graph::_heap_walk" -> "AutoLoader::__ANON__[AutoLoader.pm:31]";
"Exception::Class::Base::BEGIN@7" -> "Devel::StackTrace::BEGIN@11";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@10";
"Class::MOP::Class::_inline_slot_initializer" -> "Class::MOP::Mixin::AttributeCore::init_arg";
"Moose::Meta::Class::_inline_check_required_attr" -> "Class::MOP::Mixin::AttributeCore::init_arg";
"Class::MOP::Class::_inline_init_attr_from_constructor" -> "Class::MOP::Mixin::AttributeCore::init_arg";
"Moose::Meta::Attribute::new" -> "Class::MOP::Mixin::AttributeCore::init_arg";
"Moose::Meta::Class::_inline_init_attr_from_constructor" -> "Class::MOP::Mixin::AttributeCore::init_arg";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Meta::TypeConstraint::inlined";
"Moose::Deprecated::BEGIN@7" -> "Package::DeprecationManager::import";
"Class::MOP::Deprecated::BEGIN@7" -> "Package::DeprecationManager::import";
"Package::Stash::BEGIN@35" -> "Package::DeprecationManager::import";
"Graph::get_edge_attribute" -> "Graph::AdjacencyMap::_get_path_attr";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@332";
"parent::import" -> "Moose::Meta::Method::BEGIN@5";
"Graph::AdjacencyMap::Light::BEGIN@15" -> "Graph::AdjacencyMap::Vertex::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_427::__ANON__[(eval 597)[Eval/Closure.pm:125]:16]";
"Moose::Meta::Class::BEGIN@16" -> "Moose::Meta::Method::Constructor::BEGIN@5";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::meta";
"Moose::Util::TypeConstraints::class_type" -> "Moose::Util::TypeConstraints::create_class_type_constraint";
"Moose::Util::TypeConstraints::find_or_create_isa_type_constraint" -> "Moose::Util::TypeConstraints::create_class_type_constraint";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "Bio::Roary::SplitGroups::CORE:subst";
"Eval::Closure::_make_compiler" -> "Eval::Closure::_make_compiler_source";
"Getopt::Long::FindOption" -> "Getopt::Long::CORE:sort";
"Module::Runtime::require_module" -> "Package::Stash::XS::BEGIN@9";
"Module::Runtime::require_module" -> "Package::Stash::XS::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_8::__ANON__[(eval 32)[Eval/Closure.pm:125]:9]";
"File::Find::Rule::BEGIN@7" -> "Number::Compare::BEGIN@2";
"Moose::Exporter::build_import_methods" -> "Moose::Exporter::_make_sub_exporter_params";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Moose::Meta::Role::Application::is_method_aliased";
"Moose::Meta::Class::BEGIN@13" -> "Moose::Meta::Method::Overridden::BEGIN@7";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Attribute::_accessor_description";
"Class::MOP::Attribute::try {...} " -> "Class::MOP::Attribute::_accessor_description";
"Moose::BEGIN@10" -> "Carp::BEGIN@5";
"FindBin::BEGIN@166" -> "FindBin::init";
"Carp::BEGIN@73" -> "Carp::_fetch_sub";
"Carp::BEGIN@61" -> "Carp::_fetch_sub";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@39";
"File::Path::BEGIN@7" -> "File::Basename::BEGIN@42";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::import";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_289::__ANON__[(eval 415)[Eval/Closure.pm:125]:26]";
"Moose::BEGIN@11" -> "Module::Runtime::CORE:qr";
"Bio::SeqFeature::Generic::BEGIN@145" -> "Bio::Annotation::Collection::BEGIN@88";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_2::__ANON__[(eval 26)[Eval/Closure.pm:125]:6]";
"Bio::Tools::GFF::BEGIN@151" -> "Bio::LocatableSeq::BEGIN@107";
"Module::Runtime::module_notional_filename" -> "Module::Runtime::check_module_name";
"Class::MOP::Class::_check_metaclass_compatibility" -> "List::Util::all";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Attribute::associate_method";
"Moose::Meta::Class::BEGIN@15" -> "Moose::Meta::Class::Immutable::Trait::BEGIN@12";
"Bio::Roary::ContigsToGeneIDsFromGFF::new" -> "Eval::Closure::Sandbox_295::CORE:match";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::BEGIN@4";
"Bio::Roary::OrderGenes::new" -> "Bio::Roary::OrderGenes::__ANON__[lib/Bio/Roary/OrderGenes.pm:33]";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Moose::Meta::Role::Application::is_method_excluded";
"Class::MOP::Instance::new" -> "Class::MOP::Instance::BUILDARGS";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@11";
"Safe::BEGIN@30" -> "Safe::BEGIN@2";
"File::Temp::newdir" -> "Cwd::abs_path";
"FindBin::init" -> "Cwd::abs_path";
"Graph::set_edge_attribute" -> "Graph::add_edge";
"Graph::Traversal::next" -> "Graph::add_edge";
"Graph::add_weighted_edge" -> "Graph::add_edge";
"Graph::add_edges" -> "Graph::add_edge";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@20";
"Graph::BEGIN@33" -> "Graph::Traversal::DFS::BEGIN@6";
"main::RUNTIME" -> "Bio::Roary::Main::RoaryPostAnalysis::BEGIN@14";
"Graph::BEGIN@28" -> "Graph::AdjacencyMap::Heavy::BEGIN@13";
"Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names" -> "Bio::Roary::AnnotateGroups::CORE:regcomp";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::dont_split_groups";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:337]" -> "Sub::Exporter::_do_import";
"Bio::Roary::OrderGenes::_build_groups_to_contigs" -> "Graph::connected_components";
"Class::MOP::Mixin::HasMethods::wrap_method_body" -> "Moose::Meta::Role::method_metaclass";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@19";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_363::__ANON__[(eval 506)[Eval/Closure.pm:125]:16]";
"Moose::Util::TypeConstraints::BEGIN@34" -> "Moose::Meta::TypeConstraint::Registry::BEGIN@12";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@3";
"Moose::Meta::Method::Constructor::_initialize_body" -> "Class::MOP::Method::Constructor::_generate_constructor_method_inline";
"Class::MOP::Method::Constructor::_initialize_body" -> "Class::MOP::Method::Constructor::_generate_constructor_method_inline";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@9";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@5";
"Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names" -> "Bio::Roary::AnnotateGroups::_group_default_prefix";
"Bio::Roary::GroupStatistics::_non_unique_name_for_group" -> "Bio::Roary::AnnotateGroups::_group_default_prefix";
"Graph::Traversal::configure" -> "Graph::countedged";
"Graph::edges" -> "Graph::countedged";
"Graph::Traversal::next" -> "Graph::Traversal::visit_preorder";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_169::__ANON__[(eval 200)[Eval/Closure.pm:125]:12]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@7";
"File::Spec::Unix::tmpdir" -> "File::Spec::Unix::_cached_tmpdir";
"Carp::caller_info" -> "Carp::format_arg";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::_fragment_blocks";
"Class::MOP::Mixin::HasMethods::BEGIN@7" -> "Class::MOP::Method::Meta::BEGIN@5";
"Class::MOP::Method::Accessor::try {...} " -> "Moose::Meta::Attribute::_inline_get_value";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::Output::NumberOfGroups::new";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@33";
"File::Find::Rule::BEGIN@7" -> "Number::Compare::BEGIN@3";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::BEGIN@106";
"base::import" -> "Bio::Location::CoordinatePolicyI::BEGIN@84";
"Bio::Roary::CommandLine::Common::BEGIN@13" -> "FindBin::BEGIN@80";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@25";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_145::__ANON__[(eval 170)[Eval/Closure.pm:125]:9]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2" -> "warnings::CORE:regcomp";
"Bio::Roary::PostAnalysis::_order_genes_obj" -> "Bio::Roary::PostAnalysis::_build__order_genes_obj";
"Bio::SeqUtils::BEGIN@585" -> "Bio::Range::BEGIN@90";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@91";
"Package::DeprecationManager::BEGIN@10" -> "List::MoreUtils::BEGIN@8";
"Class::MOP::Class::_real_ref_name" -> "Class::MOP::Class::Immutable::Class::MOP::Class::is_immutable";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_151::__ANON__[(eval 177)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@15" -> "Class::MOP::Mixin::HasAttributes::BEGIN@5";
"Class::MOP::Class::BEGIN@9" -> "Class::MOP::Method::Accessor::BEGIN@10";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@8";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@43";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@78";
"base::import" -> "Bio::FeatureHolderI::BEGIN@95";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@8";
"Bio::Root::IO::BEGIN@75" -> "Fcntl::O_TEMPORARY";
"base::import" -> "Bio::SeqFeatureI::BEGIN@107";
"Moose::BEGIN@37" -> "Moose::Meta::Role::Application::ToRole::BEGIN@8";
"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToClass::meta";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Class::remove_attribute";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@35";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::ToClass::apply_override_method_modifiers";
"Eval::Closure::_canonicalize_source" -> "Scalar::Util::reftype";
"Class::MOP::Method::wrap" -> "Scalar::Util::reftype";
"Sub::Install::_CODELIKE" -> "Scalar::Util::reftype";
"Eval::Closure::_validate_env" -> "Scalar::Util::reftype";
"Class::MOP::Mixin::HasMethods::wrap_method_body" -> "Scalar::Util::reftype";
"Moose::Object::BEGIN@16" -> "if::import";
"Moose::Object::BEGIN@15" -> "if::import";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@7";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@13";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_182::__ANON__[(eval 213)[Eval/Closure.pm:125]:12]";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@4";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@19" -> "Moose::import";
"Bio::Roary::SplitGroups::BEGIN@11" -> "Moose::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::import";
"Bio::Roary::Output::NumberOfGroups::BEGIN@17" -> "Moose::import";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@17" -> "Moose::import";
"Bio::Roary::CommandLine::Common::BEGIN@12" -> "Moose::import";
"Bio::Roary::GeneNamesFromGFF::BEGIN@17" -> "Moose::import";
"Bio::Roary::AnalyseGroups::BEGIN@19" -> "Moose::import";
"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17" -> "Moose::import";
"Bio::Roary::AnnotateGroups::BEGIN@19" -> "Moose::import";
"Bio::Roary::PostAnalysis::BEGIN@11" -> "Moose::import";
"Bio::Roary::GroupStatistics::BEGIN@19" -> "Moose::import";
"Bio::Roary::Output::EmblGroups::BEGIN@19" -> "Moose::import";
"Bio::Roary::InflateClusters::BEGIN@19" -> "Moose::import";
"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@23" -> "Moose::import";
"Bio::Roary::GroupLabels::BEGIN@18" -> "Moose::import";
"Bio::Roary::OrderGenes::BEGIN@18" -> "Moose::import";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_97::__ANON__[(eval 122)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Attribute::_eval_environment" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Class::MOP::Class::_inline_init_attr_from_constructor" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Class::MOP::Attribute::_set_initial_slot_value" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Moose::Meta::Attribute::_inline_init_slot" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"List::Util::any" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Moose::Meta::Class::_inline_init_attr_from_constructor" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Moose::Meta::Class::_inline_init_attr_from_default" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Class::MOP::Class::_inline_init_attr_from_default" -> "Class::MOP::Mixin::AttributeCore::has_initializer";
"Class::MOP::Attribute::attach_to_class" -> "UNIVERSAL::isa";
"Moose::init_meta" -> "UNIVERSAL::isa";
"Bio::Roary::OrderGenes::new" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_number_of_groups_obj" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "UNIVERSAL::isa";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_annotate_groups_obj" -> "UNIVERSAL::isa";
"Bio::Roary::GroupStatistics::_text_csv_obj" -> "UNIVERSAL::isa";
"Moose::Meta::Class::add_attribute" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasMethods::remove_method" -> "UNIVERSAL::isa";
"Moose::Meta::Method::Destructor::is_needed" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_group_labels_obj" -> "UNIVERSAL::isa";
"Bio::Roary::OrderGenes::group_graphs" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_analyse_groups_obj" -> "UNIVERSAL::isa";
"Moose::Meta::TypeConstraint::Registry::add_type_constraint" -> "UNIVERSAL::isa";
"Moose::Meta::TypeConstraint::Parameterizable::parameterize" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_order_genes_obj" -> "UNIVERSAL::isa";
"Moose::Util::TypeConstraints::find_type_constraint" -> "UNIVERSAL::isa";
"Class::MOP::Class::superclasses" -> "UNIVERSAL::isa";
"Class::MOP::Method::Inlined::can_be_inlined" -> "UNIVERSAL::isa";
"Class::MOP::Object::_is_compatible_with" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_inflate_clusters_obj" -> "UNIVERSAL::isa";
"File::Path::rmtree" -> "UNIVERSAL::isa";
"Moose::Meta::Class::add_role" -> "UNIVERSAL::isa";
"Class::MOP::Method::Wrapped::wrap" -> "UNIVERSAL::isa";
"Moose::Meta::Attribute::_process_accessors" -> "UNIVERSAL::isa";
"base::import" -> "UNIVERSAL::isa";
"Moose::Util::_apply_all_roles" -> "UNIVERSAL::isa";
"metaclass::import" -> "UNIVERSAL::isa";
"Bio::Roary::Output::EmblGroups::new" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_group_statistics_obj" -> "UNIVERSAL::isa";
"Moose::Role::init_meta" -> "UNIVERSAL::isa";
"Bio::Roary::SplitGroups::new" -> "UNIVERSAL::isa";
"Bio::Roary::Output::NumberOfGroups::new" -> "UNIVERSAL::isa";
"Bio::Roary::GroupStatistics::new" -> "UNIVERSAL::isa";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "UNIVERSAL::isa";
"Graph::Traversal::new" -> "UNIVERSAL::isa";
"Moose::Meta::Class::add_role_application" -> "UNIVERSAL::isa";
"Moose::Meta::Role::apply" -> "UNIVERSAL::isa";
"Getopt::Long::GetOptionsFromArray" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasMethods::get_method" -> "UNIVERSAL::isa";
"Moose::Meta::Class::superclasses" -> "UNIVERSAL::isa";
"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint" -> "UNIVERSAL::isa";
"Moose::Exporter::_apply_metaroles" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasMethods::add_method" -> "UNIVERSAL::isa";
"Bio::Roary::PostAnalysis::_split_groups_obj" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "UNIVERSAL::isa";
"Class::MOP::Method::Constructor::new" -> "UNIVERSAL::isa";
"Moose::Meta::Role::Attribute::attach_to_role" -> "UNIVERSAL::isa";
"Class::MOP::Method::Accessor::new" -> "UNIVERSAL::isa";
"Class::MOP::Attribute::__ANON__[Class/MOP/Attribute.pm:478]" -> "UNIVERSAL::isa";
"Class::MOP::Class::new_object" -> "UNIVERSAL::isa";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Moose::Meta::Role::_meta_method_class";
"Moose::Exporter::_make_exporter" -> "Sub::Exporter::build_exporter";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:460]" -> "Sub::Exporter::build_exporter";
"Sub::Exporter::setup_exporter" -> "Sub::Exporter::build_exporter";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_263::__ANON__[(eval 389)[Eval/Closure.pm:125]:9]";
"Class::MOP::Class::_initialize_immutable" -> "Class::MOP::Class::_install_inlined_code";
"Class::MOP::Mixin::AttributeCore::BEGIN@9" -> "parent::BEGIN@3";
"Moose::Meta::TypeConstraint::Union::BEGIN@8" -> "Moose::Meta::TypeCoercion::Union::BEGIN@6";
"Bio::Roary::OrderGenes::_build__groups_to_file_contigs" -> "Bio::Roary::OrderGenes::analyse_groups_obj";
"Bio::Roary::PostAnalysis::_analyse_groups_obj" -> "Bio::Roary::PostAnalysis::_build__analyse_groups_obj";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@233";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::BEGIN@263";
"Graph::AdjacencyMap::Light::__attr" -> "Graph::add_edges";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Class::MOP::Class::constructor_class";
"List::Util::all" -> "Class::MOP::Class::constructor_class";
"Class::MOP::Class::_immutable_options" -> "Class::MOP::Class::constructor_class";
"Bio::Roary::GroupLabels::_build__input_fh" -> "Bio::Roary::GroupLabels::groups_filename";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_267::__ANON__[(eval 393)[Eval/Closure.pm:125]:4]";
"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_27::__ANON__[(eval 51)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@11" -> "Module::Runtime::CORE:regcomp";
"Module::Runtime::is_module_name" -> "Module::Runtime::CORE:regcomp";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@234";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_98::__ANON__[(eval 123)[Eval/Closure.pm:125]:9]";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_117::__ANON__[(eval 142)[Eval/Closure.pm:125]:157]";
"Moose::Meta::Method::Destructor::_initialize_body" -> "Moose::Meta::Method::Destructor::_generate_fallback_destructor";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@674";
"Bio::Factory::FTLocationFactory::BEGIN@104" -> "Bio::Factory::FTLocationFactory::CORE:qr";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_295::__ANON__[(eval 421)[Eval/Closure.pm:125]:119]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_196::__ANON__[(eval 297)[Eval/Closure.pm:125]:13]";
"Sub::Exporter::_expand_group" -> "Sub::Exporter::_expand_groups";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:337]" -> "Sub::Exporter::_expand_groups";
"Bio::Roary::SplitGroups::_pre_filter_fasta_files" -> "Bio::Roary::SplitGroups::_gene_files_temp_dir_obj";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "Bio::Roary::SplitGroups::_gene_files_temp_dir_obj";
"Class::MOP::Attribute::_inline_instance_set" -> "Class::MOP::Instance::inline_set_slot_value";
"Bio::Roary::GeneNamesFromGFF::ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name";
"Bio::Roary::GeneNamesFromGFF::BEGIN@19" -> "Bio::Tools::GFF::BEGIN@154";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@9";
"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@13";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::_new_genes";
"Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion" -> "Bio::Roary::Output::NumberOfGroups::_new_genes";
"Moose::Meta::Role::BEGIN@11" -> "Moose::Meta::Role::Attribute::BEGIN@5";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@9";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@18";
"Moose::BEGIN@9" -> "List::Util::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_387::__ANON__[(eval 530)[Eval/Closure.pm:125]:16]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@248";
"Bio::Roary::OrderGenes::group_order" -> "Bio::Roary::OrderGenes::_build_group_order";
"Bio::Range::BEGIN@91" -> "integer::import";
"Bio::RangeI::BEGIN@93" -> "integer::import";
"IO::Handle::BEGIN@265" -> "SelectSaver::BEGIN@38";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_393::__ANON__[(eval 563)[Eval/Closure.pm:125]:4]";
"Exception::Class::Base::BEGIN@6" -> "Class::Data::Inheritable::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@7";
"Moose::Meta::Role::Attribute::attribute_for_class" -> "Moose::Meta::Role::Attribute::original_options";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::threadsv_names";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::TypeCoercion::BEGIN@2";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Bio::Roary::GeneNamesFromGFF::meta";
"Class::MOP::Method::Constructor::new" -> "Class::MOP::Method::Constructor::_new";
"Class::MOP::Class::_inline_destructor" -> "Class::MOP::Class::_add_inlined_method";
"Class::MOP::Class::_inline_constructor" -> "Class::MOP::Class::_add_inlined_method";
"base::import" -> "Bio::DB::RandomAccessI::BEGIN@64";
"Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string" -> "Bio::Roary::GeneNamesFromGFF::_awk_filter";
"Graph::_connected_components_compute" -> "Graph::has_union_find";
"Graph::add_vertex" -> "Graph::has_union_find";
"Graph::add_edge" -> "Graph::has_union_find";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_259::__ANON__[(eval 385)[Eval/Closure.pm:125]:13]";
"File::Temp::BEGIN@17" -> "Errno::BEGIN@21";
"base::import" -> "Bio::Factory::ObjectBuilderI::BEGIN@95";
"Class::MOP::Class::BEGIN@9" -> "Class::MOP::Method::Accessor::BEGIN@4";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@22";
"Graph::_add_edge" -> "Graph::add_vertex";
"File::Find::Rule::BEGIN@6" -> "Text::Glob::BEGIN@4";
"Bio::Root::Root::BEGIN@146" -> "AutoLoader::BEGIN@138";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@17";
"Bio::Root::IO::BEGIN@75" -> "Fcntl::O_LARGEFILE";
"Bio::Roary::OrderGenes::number_of_files" -> "Eval::Closure::Sandbox_306::CORE:match";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@14";
"Graph::BEGIN@29" -> "Graph::AdjacencyMap::Light::BEGIN@7";
"Carp::format_arg" -> "utf8::downgrade";
"Bio::Roary::AnnotateGroups::reannotate" -> "Bio::Roary::AnnotateGroups::CORE:print";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::cpus";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::create_files";
"Class::MOP::Class::add_around_method_modifier" -> "Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]";
"Class::MOP::Class::add_before_method_modifier" -> "Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::BEGIN@7";
"Moose::Meta::Attribute::BEGIN@14" -> "Moose::Meta::Method::Delegation::BEGIN@4";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::clusters_filename";
"Graph::countedged" -> "Graph::AdjacencyMap::Light::_is_COUNT";
"Graph::countvertexed" -> "Graph::AdjacencyMap::Light::_is_COUNT";
"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@5";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@6";
"Moose::BEGIN@28" -> "Moose::Meta::Instance::BEGIN@5";
"Moose::Meta::Role::Application::ToClass::apply_attributes" -> "Moose::Meta::Role::Attribute::attribute_for_class";
"Class::MOP::Mixin::HasOverloads::BEGIN@9" -> "Devel::OverloadInfo::BEGIN@18";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::Parameterizable::_new";
"File::Path::rmtree" -> "File::Path::CORE:subst";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::_number_of_isolates";
"Graph::vertices05" -> "Graph::AdjacencyMap::Light::paths";
"Graph::edges05" -> "Graph::AdjacencyMap::Light::paths";
"Moose::BEGIN@10" -> "Carp::BEGIN@61";
"Bio::Roary::Output::EmblGroups::_build__groups_to_files" -> "Bio::Roary::Output::EmblGroups::analyse_groups_obj";
"Bio::Roary::Output::EmblGroups::_build__sorted_file_names" -> "Bio::Roary::Output::EmblGroups::analyse_groups_obj";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@11";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_64::__ANON__[(eval 88)[Eval/Closure.pm:125]:4]";
"Module::Runtime::require_module" -> "Module::Runtime::module_notional_filename";
"Moose::init_meta" -> "Module::Runtime::module_notional_filename";
"Class::MOP::Package::create" -> "Module::Runtime::module_notional_filename";
"Module::Runtime::use_package_optimistically" -> "Module::Runtime::module_notional_filename";
"Moose::Role::init_meta" -> "Module::Runtime::module_notional_filename";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_85::__ANON__[(eval 110)[Eval/Closure.pm:125]:28]";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::BEGIN@18";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_187::__ANON__[(eval 218)[Eval/Closure.pm:125]:85]";
"File::Path::_rmtree" -> "File::Path::CORE:unlink";
"Bio::DB::InMemoryCache::BEGIN@75" -> "Bio::Seq::BEGIN@459";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_206::__ANON__[(eval 307)[Eval/Closure.pm:125]:13]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::CORE:sort";
"Sub::Install::__ANON__[Sub/Install.pm:132]" -> "Sub::Install::__ANON__[Sub/Install.pm:175]";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@2";
"Moose::Exporter::setup_import_methods" -> "Moose::Exporter::build_import_methods";
"Moose::BEGIN@28" -> "Moose::Meta::Instance::BEGIN@7";
"base::import" -> "Bio::AnnotationI::BEGIN@116";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_89::__ANON__[(eval 114)[Eval/Closure.pm:125]:9]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_357::__ANON__[(eval 500)[Eval/Closure.pm:125]:16]";
"Moose::Meta::Class::_inline_slot_initializer" -> "Moose::Meta::Class::_inline_check_required_attr";
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"Bio::Roary::InflateClusters::_clusters_fh" -> "Bio::Roary::ClustersRole::_build__clusters_fh";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_79::__ANON__[(eval 104)[Eval/Closure.pm:125]:27]";
"FindBin::init" -> "FindBin::CORE:readlink";
"Errno::BEGIN@8" -> "Config::import";
"DynaLoader::BEGIN@22" -> "Config::import";
"File::Copy::BEGIN@14" -> "Config::import";
"Moose::Meta::TypeConstraint::Class::__ANON__[Moose/Meta/TypeConstraint/Class.pm:25]" -> "B::perlstring";
"Moose::Meta::Attribute::_inline_generate_default" -> "B::perlstring";
"Moose::Meta::TypeConstraint::Role::__ANON__[Moose/Meta/TypeConstraint/Role.pm:27]" -> "B::perlstring";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Mixin::HasMethods::update_package_cache_flag";
"Class::MOP::Mixin::HasMethods::remove_method" -> "Class::MOP::Mixin::HasMethods::update_package_cache_flag";
"File::Temp::_replace_XX" -> "File::Temp::CORE:substcont";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_362::__ANON__[(eval 505)[Eval/Closure.pm:125]:13]";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@3";
"Bio::Roary::AnnotateGroups::BEGIN@25" -> "File::Grep::BEGIN@10";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@15";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::_conserved_genes";
"Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion" -> "Bio::Roary::Output::NumberOfGroups::_conserved_genes";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:211]";
"Moose::Meta::Role::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:211]";
"Bio::Roary::OrderGenes::_add_groups_to_graph" -> "Bio::Roary::OrderGenes::group_graphs";
"Bio::Roary::OrderGenes::_build_groups_to_contigs" -> "Bio::Roary::OrderGenes::group_graphs";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::AnalyseGroups::DESTROY";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:22]";
"base::import" -> "Bio::Location::WidestCoordPolicy::new";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@24";
"Class::MOP::Class::_inline_destructor" -> "Class::MOP::Method::Inlined::can_be_inlined";
"Class::MOP::Class::_inline_constructor" -> "Class::MOP::Method::Inlined::can_be_inlined";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@699";
"base::import" -> "Bio::AnnotationCollectionI::BEGIN@137";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_396::__ANON__[(eval 566)[Eval/Closure.pm:125]:16]";
"Moose::BEGIN@37" -> "Moose::Meta::Role::Application::ToRole::BEGIN@10";
"Moose::BEGIN@33" -> "Moose::Meta::Role::Composite::BEGIN@6";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_277::__ANON__[(eval 403)[Eval/Closure.pm:125]:13]";
"Graph::_check_cache" -> "Graph::Attribute::get_attribute";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@15";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::define_builtins";
"Class::MOP::Class::BEGIN@9" -> "Class::MOP::Method::Accessor::BEGIN@5";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Deprecated::BEGIN@4";
"Class::MOP::Class::_real_ref_name" -> "Class::MOP::Class::is_immutable";
"Moose::Deprecated::BEGIN@7" -> "Package::DeprecationManager::BEGIN@6";
"Bio::PrimarySeqI::BEGIN@124" -> "Bio::Tools::CodonTable::BEGIN@198";
"Graph::MSTHeapElem::BEGIN@5" -> "Heap071::Elem::BEGIN@3";
"DynaLoader::bootstrap" -> "DynaLoader::dl_load_flags";
"Class::MOP::Instance::BUILDARGS" -> "Class::MOP::Attribute::slots";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:290]";
"Moose::Meta::Role::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:290]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@3051";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@17";
"Moose::Meta::TypeConstraint::Role::__ANON__[Moose/Meta/TypeConstraint/Role.pm:27]" -> "Moose::Meta::TypeConstraint::Role::role";
"Graph::new" -> "Graph::_opt";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@225";
"Graph::BEGIN@42" -> "Safe::BEGIN@34";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::CORE:match";
"parent::import" -> "Class::MOP::Package::BEGIN@5";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_409::__ANON__[(eval 579)[Eval/Closure.pm:125]:9]";
"File::Copy::BEGIN@13" -> "File::Spec::BEGIN@4";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:126]";
"Class::MOP::Mixin::AttributeCore::default" -> "Moose::Meta::Class::__ANON__[Moose/Meta/Class.pm:28]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_423::__ANON__[(eval 593)[Eval/Closure.pm:125]:16]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_302::__ANON__[(eval 445)[Eval/Closure.pm:125]:26]";
"IO::Handle::BEGIN@265" -> "SelectSaver::BEGIN@39";
"Moose::BEGIN@33" -> "Moose::Meta::Role::Composite::BEGIN@10";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@6";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@331";
"base::import" -> "Bio::PrimarySeqI::BEGIN@124";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Attribute::_inline_has_value";
"Bio::Roary::AnalyseGroups::_builder__files_to_genes" -> "Bio::Roary::AnalyseGroups::CORE:close";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::CORE:close";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_22::__ANON__[(eval 46)[Eval/Closure.pm:125]:9]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_403::__ANON__[(eval 573)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_55::__ANON__[(eval 79)[Eval/Closure.pm:125]:4]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@88";
"Class::MOP::Object::_new" -> "Class::MOP::class_of";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:39]" -> "Class::MOP::class_of";
"Moose::Meta::Class::excludes_role" -> "Class::MOP::class_of";
"Class::MOP::Class::_superclasses_updated" -> "Class::MOP::class_of";
"Moose::Meta::Class::superclasses" -> "Class::MOP::class_of";
"Moose::Util::find_meta" -> "Class::MOP::class_of";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:252]" -> "Class::MOP::class_of";
"Moose::Meta::Attribute::BEGIN@16" -> "Class::MOP::class_of";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@16";
"Moose::Deprecated::BEGIN@7" -> "Moose::Deprecated::CORE:qr";
"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::Class::_construct_instance";
"Class::MOP::Class::new_object" -> "Class::MOP::Class::_construct_instance";
"List::Util::first" -> "Data::OptList::__is_a";
"Data::OptList::mkopt" -> "Data::OptList::__is_a";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_164::__ANON__[(eval 195)[Eval/Closure.pm:125]:96]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_111::__ANON__[(eval 136)[Eval/Closure.pm:125]:19]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_200::__ANON__[(eval 301)[Eval/Closure.pm:125]:26]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@86";
"Class::MOP::Class::BEGIN@8" -> "Class::MOP::Method::Wrapped::BEGIN@7";
"Bio::Roary::AnnotateGroups::_groups_to_id_names" -> "Bio::Roary::AnnotateGroups::_builder__groups_to_id_names";
"Class::MOP::Class::find_all_methods_by_name" -> "Class::MOP::Mixin::HasMethods::has_method";
"Class::MOP::Class::_inline_destructor" -> "Class::MOP::Mixin::HasMethods::has_method";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Mixin::HasMethods::has_method";
"Class::MOP::Class::_inline_constructor" -> "Class::MOP::Mixin::HasMethods::has_method";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Class::MOP::Method::name";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Method::name";
"Class::MOP::Method::Inlined::can_be_inlined" -> "Class::MOP::Method::name";
"Class::MOP::Class::get_all_methods" -> "Class::MOP::Method::name";
"Graph::set_edge_attribute" -> "Graph::has_edge";
"Graph::get_edge_attribute" -> "Graph::has_edge";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Graph::has_edge";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@2279";
"Moose::Meta::Attribute::BEGIN@14" -> "Moose::Meta::Method::Delegation::BEGIN@7";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@335";
"Bio::Roary::PostAnalysis::_build__group_labels_obj" -> "Bio::Roary::GroupLabels::new";
"Module::Runtime::require_module" -> "Bio::Roary::JobRunner::Role::BEGIN@12";
"base::import" -> "Bio::Root::RootI::BEGIN@85";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_245::__ANON__[(eval 371)[Eval/Closure.pm:125]:12]";
"Bio::Roary::OrderGenes::_groups_to_file_contigs" -> "Bio::Roary::OrderGenes::_build__groups_to_file_contigs";
"Bio::Roary::ClustersRole::_build__clustered_genes" -> "Bio::Roary::ClustersRole::CORE:readline";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@5";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@16";
"Bio::Roary::CommandLine::Common::BEGIN@13" -> "FindBin::BEGIN@166";
"Moose::Meta::Class::_inline_triggers" -> "Moose::Meta::Class::CORE:sort";
"Moose::Meta::Class::_eval_environment" -> "Moose::Meta::Class::CORE:sort";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_lazy_build_option";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_258::__ANON__[(eval 384)[Eval/Closure.pm:125]:12]";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_is_option";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_237::__ANON__[(eval 354)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_130::__ANON__[(eval 155)[Eval/Closure.pm:125]:9]";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@12";
"Moose::Util::TypeConstraints::import" -> "Moose::Exporter::_get_caller";
"Moose::import" -> "Moose::Exporter::_get_caller";
"Moose::Role::import" -> "Moose::Exporter::_get_caller";
"Data::OptList::BEGIN@10" -> "Params::Util::BEGIN@58";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@17";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@19";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@10";
"DynaLoader::BEGIN@22" -> "Config::BEGIN@11";
"Graph::BEGIN@36" -> "Graph::Undirected::BEGIN@3";
"File::Temp::BEGIN@16" -> "IO::Seekable::BEGIN@97";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@8";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@7";
"Bio::Roary::ClustersRole::_build__clustered_genes" -> "Bio::Roary::InflateClusters::_clusters_fh";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_163::__ANON__[(eval 194)[Eval/Closure.pm:125]:12]";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@33";
"Graph::AdjacencyMap::_set_path_attr" -> "Graph::AdjacencyMap::CORE:sort";
"Graph::AdjacencyMap::__get_path_node" -> "Graph::AdjacencyMap::CORE:sort";
"Graph::AdjacencyMap::_get_path_attr" -> "Graph::AdjacencyMap::CORE:sort";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_88::__ANON__[(eval 113)[Eval/Closure.pm:125]:9]";
"Class::MOP::Instance::create_instance" -> "Class::MOP::Instance::_class_name";
"Class::MOP::Mixin::HasMethods::_get_maybe_raw_method" -> "Class::MOP::Package::get_package_symbol";
"Sub::Exporter::_expand_groups" -> "Sub::Exporter::_expand_group";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@75";
"Bio::Tools::CodonTable::BEGIN@190" -> "Bio::Tools::IUPAC::BEGIN@169";
"Moose::Meta::Role::get_required_method_list" -> "Moose::Meta::Role::get_required_methods_map";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@9";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::DESTROY";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@17";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_426::__ANON__[(eval 596)[Eval/Closure.pm:125]:16]";
"Moose::Role::has" -> "Moose::Meta::Role::add_attribute";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@15";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_353::__ANON__[(eval 496)[Eval/Closure.pm:125]:9]";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_min_nucleotide_overlap_percentage";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@15";
"Moose::Meta::Attribute::_eval_environment" -> "Class::MOP::Package::name";
"Class::MOP::Class::linearized_isa" -> "Class::MOP::Package::name";
"Moose::Meta::Role::Application::ToClass::check_role_exclusions" -> "Class::MOP::Package::name";
"Class::MOP::Instance::_class_name" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::_full_method_map" -> "Class::MOP::Package::name";
"Class::MOP::Class::class_precedence_list" -> "Class::MOP::Package::name";
"Moose::Meta::Method::Destructor::_initialize_body" -> "Class::MOP::Package::name";
"Moose::init_meta" -> "Class::MOP::Package::name";
"Class::MOP::Attribute::try {...} " -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Class::MOP::Package::name";
"Class::MOP::Class::_inline_constructor" -> "Class::MOP::Package::name";
"Class::MOP::Module::_instantiate_module" -> "Class::MOP::Package::name";
"Class::MOP::Class::_inline_fallback_constructor" -> "Class::MOP::Package::name";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::update_package_cache_flag" -> "Class::MOP::Package::name";
"Class::MOP::Class::_construct_instance" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::wrap_method_body" -> "Class::MOP::Package::name";
"Class::MOP::Class::_inline_destructor" -> "Class::MOP::Package::name";
"Moose::Role::init_meta" -> "Class::MOP::Package::name";
"Class::MOP::Class::_inline_preserve_weak_metaclasses" -> "Class::MOP::Package::name";
"Moose::Meta::Class::_eval_environment" -> "Class::MOP::Package::name";
"Class::MOP::Attribute::_accessor_description" -> "Class::MOP::Package::name";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::_code_is_mine" -> "Class::MOP::Package::name";
"Class::MOP::Package::_package_stash" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Package::name";
"Class::MOP::Mixin::HasOverloads::is_overloaded" -> "Class::MOP::Package::name";
"Class::MOP::Class::superclasses" -> "Class::MOP::Package::name";
"Class::MOP::Package::create" -> "Class::MOP::Package::name";
"Class::MOP::Method::Inlined::can_be_inlined" -> "Class::MOP::Package::name";
"Class::MOP::Class::new_object" -> "Class::MOP::Package::name";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_311::__ANON__[(eval 454)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::apply_before_method_modifiers";
"Bio::Roary::PostAnalysis::_group_statistics_obj" -> "Bio::Roary::PostAnalysis::_build__group_statistics_obj";
"File::Spec::Unix::tmpdir" -> "File::Spec::Unix::_cache_tmpdir";
"IO::Handle::BEGIN@266" -> "IO::BEGIN@8";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@12";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "Tie::Hash::BEGIN@188";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@98";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_308::__ANON__[(eval 451)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_104::__ANON__[(eval 129)[Eval/Closure.pm:125]:9]";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:139]";
"Moose::Meta::Role::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:139]";
"Graph::_root_opt" -> "Graph::_get_options";
"Graph::new" -> "Graph::_get_options";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_257::__ANON__[(eval 383)[Eval/Closure.pm:125]:12]";
"Package::DeprecationManager::BEGIN@10" -> "List::MoreUtils::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_390::__ANON__[(eval 560)[Eval/Closure.pm:125]:4]";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@16";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@16";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@22";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::InflateClusters::DESTROY";
"Sub::Install::BEGIN@190" -> "Sub::Install::_build_public_installer";
"Graph::new" -> "Graph::AdjacencyMap::Light::_new";
"Class::MOP::Mixin::HasMethods::_get_maybe_raw_method" -> "Class::MOP::Class::Immutable::Class::MOP::Class::_method_map";
"Class::MOP::Mixin::HasMethods::get_method" -> "Class::MOP::Class::Immutable::Class::MOP::Class::_method_map";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_106::__ANON__[(eval 131)[Eval/Closure.pm:125]:100]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_219::__ANON__[(eval 320)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@10";
"Moose::Meta::Role::Application::ToInstance::BEGIN@9" -> "UNIVERSAL::VERSION";
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"File::Temp::BEGIN@44" -> "UNIVERSAL::VERSION";
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"Class::Load::BEGIN@9" -> "UNIVERSAL::VERSION";
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"Moose::Meta::TypeConstraint::Union::BEGIN@10" -> "UNIVERSAL::VERSION";
"Exception::Class::Base::BEGIN@7" -> "UNIVERSAL::VERSION";
"Moose::Util::BEGIN@7" -> "UNIVERSAL::VERSION";
"Moose::Meta::Role::Attribute::BEGIN@7" -> "UNIVERSAL::VERSION";
"Moose::Exporter::BEGIN@11" -> "UNIVERSAL::VERSION";
"Moose::Exporter::BEGIN@12" -> "UNIVERSAL::VERSION";
"Moose::Meta::Role::Application::BEGIN@9" -> "UNIVERSAL::VERSION";
"Moose::Util::TypeConstraints::Builtins::BEGIN@8" -> "UNIVERSAL::VERSION";
"Devel::OverloadInfo::BEGIN@22" -> "UNIVERSAL::VERSION";
"Package::Stash::BEGIN@15" -> "UNIVERSAL::VERSION";
"Sub::Exporter::BEGIN@11" -> "UNIVERSAL::VERSION";
"File::Temp::BEGIN@15" -> "UNIVERSAL::VERSION";
"Devel::OverloadInfo::BEGIN@19" -> "UNIVERSAL::VERSION";
"Module::Implementation::BEGIN@9" -> "UNIVERSAL::VERSION";
"Exception::Class::Base::BEGIN@6" -> "UNIVERSAL::VERSION";
"Moose::Util::BEGIN@12" -> "UNIVERSAL::VERSION";
"Moose::Util::MetaRole::BEGIN@8" -> "UNIVERSAL::VERSION";
"File::Temp::BEGIN@12" -> "UNIVERSAL::VERSION";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@8" -> "UNIVERSAL::VERSION";
"File::Temp::BEGIN@32" -> "UNIVERSAL::VERSION";
"Moose::Meta::Attribute::BEGIN@8" -> "UNIVERSAL::VERSION";
"File::Temp::BEGIN@14" -> "UNIVERSAL::VERSION";
"Exporter::Heavy::heavy_export" -> "UNIVERSAL::VERSION";
"Class::Load::XS::BEGIN@9" -> "UNIVERSAL::VERSION";
"Try::Tiny::BEGIN@12" -> "UNIVERSAL::VERSION";
"Moose::Deprecated::BEGIN@7" -> "UNIVERSAL::VERSION";
"Sub::Exporter::BEGIN@12" -> "UNIVERSAL::VERSION";
"Class::MOP::BEGIN@10" -> "UNIVERSAL::VERSION";
"Class::Load::BEGIN@10" -> "UNIVERSAL::VERSION";
"Class::MOP::Class::BEGIN@18" -> "UNIVERSAL::VERSION";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@8";
"Moose::Util::TypeConstraints::find_or_parse_type_constraint" -> "Moose::Util::TypeConstraints::normalize_type_constraint_name";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Method::Accessor::_inline_throw_exception";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_140::__ANON__[(eval 165)[Eval/Closure.pm:125]:6]";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::max_recursion";
"Bio::DB::InMemoryCache::BEGIN@75" -> "Bio::Seq::BEGIN@464";
"Graph::BEGIN@86" -> "Graph::Attribute::BEGIN@49";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "Tie::StdHash::TIEHASH";
"DynaLoader::bootstrap" -> "DynaLoader::dl_find_symbol";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_lazy_option";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Text::CSV::AUTOLOAD";
"Package::DeprecationManager::BEGIN@10" -> "List::MoreUtils::BEGIN@4";
"Moose::Util::TypeConstraints::BEGIN@28" -> "Moose::Meta::TypeConstraint::Class::BEGIN@8";
"File::Path::BEGIN@7" -> "File::Basename::BEGIN@51";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_41::__ANON__[(eval 65)[Eval/Closure.pm:125]:6]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_176::__ANON__[(eval 207)[Eval/Closure.pm:125]:15]";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@22";
"Moose::Deprecated::BEGIN@7" -> "Package::DeprecationManager::BEGIN@11";
"File::Temp::newdir" -> "File::Temp::tempdir";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::import";
"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint" -> "Moose::Meta::TypeConstraint::compile_type_constraint";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::compile_type_constraint";
"Moose::Meta::TypeConstraint::Class::new" -> "Moose::Meta::TypeConstraint::compile_type_constraint";
"Moose::Meta::TypeConstraint::Role::new" -> "Moose::Meta::TypeConstraint::compile_type_constraint";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::has_predicate";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::has_predicate";
"Moose::Meta::TypeConstraint::Registry::add_type_constraint" -> "Moose::Meta::TypeConstraint::name";
"Moose::Meta::TypeConstraint::Parameterizable::parameterize" -> "Moose::Meta::TypeConstraint::name";
"Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for" -> "Moose::Meta::TypeConstraint::name";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::name";
"File::Temp::cleanup" -> "File::Temp::CORE:sort";
"Data::OptList::BEGIN@10" -> "DynaLoader::bootstrap";
"File::Copy::BEGIN@13" -> "DynaLoader::bootstrap";
"Try::Tiny::BEGIN@1" -> "DynaLoader::bootstrap";
"Moose::Exporter::BEGIN@8" -> "DynaLoader::bootstrap";
"Bio::Root::Root::BEGIN@146" -> "DynaLoader::bootstrap";
"List::MoreUtils::BEGIN@9" -> "DynaLoader::bootstrap";
"overload::BEGIN@116" -> "overloading::unimport";
"B::Deparse::BEGIN@4020" -> "overloading::unimport";
"overload::BEGIN@85" -> "overloading::unimport";
"Class::MOP::Mixin::AttributeCore::BEGIN@9" -> "parent::BEGIN@25";
"Class::MOP::Class::_inline_slot_initializers" -> "Class::MOP::Class::CORE:sort";
"Class::MOP::Class::_eval_environment" -> "Class::MOP::Class::CORE:sort";
"Bio::Roary::GeneNamesFromGFF::BEGIN@19" -> "Bio::Tools::GFF::BEGIN@150";
"Class::MOP::Attribute::_inline_get_value" -> "Class::MOP::Attribute::_inline_instance_get";
"Moose::Meta::Attribute::_inline_get_value" -> "Class::MOP::Attribute::_inline_instance_get";
"Moose::Meta::Role::Attribute::original_role" -> "Moose::Meta::Role::Attribute::associated_role";
"Exporter::Heavy::heavy_export" -> "Carp::croak";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_210::__ANON__[(eval 311)[Eval/Closure.pm:125]:26]";
"Class::MOP::Method::Constructor::_generate_constructor_method_inline" -> "Class::MOP::Class::_inline_new_object";
"Graph::_root_opt" -> "Graph::vertices05";
"Graph::vertices" -> "Graph::vertices05";
"Graph::unique_vertices" -> "Graph::vertices05";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_trigger_option";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Graph::MST_Prim";
"Moose::BEGIN@10" -> "Carp::BEGIN@171";
"Sub::Exporter::default_generator" -> "Moose::Exporter::__ANON__[Moose/Exporter.pm:317]";
"Graph::set_edge_attribute" -> "Graph::expect_non_multiedged";
"Graph::get_edge_attribute" -> "Graph::expect_non_multiedged";
"Graph::add_weighted_edge" -> "Graph::expect_non_multiedged";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_50::__ANON__[(eval 74)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_188::__ANON__[(eval 219)[Eval/Closure.pm:125]:9]";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:307]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@14";
"Moose::Meta::Role::Attribute::attribute_for_class" -> "Moose::Meta::Role::Attribute::original_role";
"Moose::BEGIN@32" -> "Moose::Meta::Role::meta";
"Class::MOP::Method::Meta::wrap" -> "Moose::Meta::Role::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::meta";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_336::__ANON__[(eval 479)[Eval/Closure.pm:125]:13]";
"Bio::SeqUtils::BEGIN@585" -> "Bio::Range::BEGIN@91";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_198::__ANON__[(eval 299)[Eval/Closure.pm:125]:4]";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@5";
"Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:8]" -> "Scalar::Util::refaddr";
"Class::MOP::Method::Inlined::can_be_inlined" -> "Scalar::Util::refaddr";
"Data::OptList::mkopt" -> "Params::Util::_HASHLIKE";
"Data::OptList::__is_a" -> "Params::Util::_HASHLIKE";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::Builtins::as";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::meta";
"Moose::Meta::Role::BEGIN@14" -> "Moose::Meta::Role::Method::Required::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Method::Required::meta";
"Graph::AdjacencyMatrix::BEGIN@5" -> "Graph::BitMatrix::BEGIN@3";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_68::__ANON__[(eval 93)[Eval/Closure.pm:125]:100]";
"Class::MOP::Mixin::HasOverloads::is_overloaded" -> "overload::Overloaded";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::meta";
"Graph::AdjacencyMap::Light::BEGIN@15" -> "Graph::AdjacencyMap::Vertex::BEGIN@15";
"Moose::Meta::Class::BEGIN@17" -> "Moose::Meta::Method::Destructor::BEGIN@8";
"parent::import" -> "Class::MOP::Package::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_137::__ANON__[(eval 162)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@34" -> "Moose::Meta::Role::Application::BEGIN@7";
"Getopt::Long::GetOptionsFromArray" -> "Getopt::Long::ParseOptionSpec";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::AnnotateGroups::_groups";
"Bio::Roary::Output::EmblGroups::_build__groups_to_files" -> "Bio::Roary::AnnotateGroups::_groups";
"Bio::Roary::GroupStatistics::_build__groups_to_files" -> "Bio::Roary::AnnotateGroups::_groups";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::AnnotateGroups::_groups";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::AnnotateGroups::_groups";
"Moose::Meta::TypeConstraint::create_child_type" -> "Moose::Meta::TypeConstraint::new";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Moose::Meta::TypeConstraint::new";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Meta::TypeConstraint::new";
"Moose::Meta::TypeConstraint::Parameterizable::parameterize" -> "Moose::Meta::TypeConstraint::new";
"Moose::Meta::TypeConstraint::Class::new" -> "Moose::Meta::TypeConstraint::new";
"Moose::Meta::TypeConstraint::Role::new" -> "Moose::Meta::TypeConstraint::new";
"Bio::Roary::AnnotateGroups::BEGIN@22" -> "Data::Dumper::BEGIN@18";
"DynaLoader::bootstrap" -> "DynaLoader::dl_undef_symbols";
"Class::MOP::Method::Wrapped::add_around_modifier" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:64]";
"Class::MOP::Method::Wrapped::wrap" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:64]";
"Class::MOP::Method::Wrapped::add_before_modifier" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:64]";
"Class::Load::BEGIN@8" -> "Class::Load::BEGIN@1";
"Module::Runtime::require_module" -> "Class::Load::XS::BEGIN@11";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@3";
"Package::Stash::BEGIN@17" -> "Module::Implementation::implementation_for";
"Graph::_MST_add" -> "Graph::successors";
"Graph::Traversal::next" -> "Graph::successors";
"Devel::OverloadInfo::BEGIN@18" -> "Sub::Identify::BEGIN@3";
"Bio::Roary::AnnotateGroups::_builder__groups_to_id_names" -> "Bio::Roary::AnnotateGroups::groups_filename";
"Class::MOP::Class::BEGIN@7" -> "Class::MOP::Instance::BEGIN@5";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::_sorted_file_names";
"Moose::Util::_apply_all_roles" -> "Data::OptList::mkopt";
"Data::OptList::mkopt_hash" -> "Data::OptList::mkopt";
"Sub::Exporter::_expand_group" -> "Data::OptList::mkopt";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:337]" -> "Data::OptList::mkopt";
"Moose::Meta::Class::superclasses" -> "Data::OptList::mkopt";
"Class::MOP::Class::remove_attribute" -> "Moose::Meta::Attribute::remove_accessors";
"Try::Tiny::BEGIN@1" -> "Sub::Name::BEGIN@49";
"Data::Dumper::BEGIN@272" -> "Data::Dumper::_vstring";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string";
"File::Temp::Dir::DESTROY" -> "File::Temp::Dir::CORE:ftdir";
"Graph::BEGIN@42" -> "Safe::CORE:match";
"Class::MOP::Mixin::AttributeCore::default" -> "Moose::Meta::TypeConstraint::Registry::__ANON__[Moose/Meta/TypeConstraint/Registry.pm:23]";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_reader_method";
"Try::Tiny::BEGIN@1" -> "Sub::Name::BEGIN@42";
"utf8::AUTOLOAD" -> "utf8::BEGIN@166";
"Graph::BEGIN@34" -> "Graph::MSTHeapElem::BEGIN@4";
"overload::Overloaded" -> "overload::mycan";
"Moose::Meta::Role::Application::new" -> "Moose::Meta::Role::Application::ToClass::_new";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::ToClass::apply_methods";
"Moose::Util::TypeConstraints::BEGIN@28" -> "Moose::Meta::TypeConstraint::Class::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_331::__ANON__[(eval 474)[Eval/Closure.pm:125]:13]";
"Bio::PrimarySeqI::BEGIN@124" -> "Bio::Tools::CodonTable::BEGIN@191";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@19";
"Class::MOP::Mixin::HasMethods::_get_maybe_raw_method" -> "Class::MOP::Mixin::HasMethods::_code_is_mine";
"Devel::StackTrace::BEGIN@10" -> "Devel::StackTrace::Frame::BEGIN@3";
"Moose::Meta::TypeConstraint::BEGIN@6" -> "metaclass::BEGIN@5";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::CORE:readline";
"Class::MOP::Class::_inline_destructor" -> "Moose::Meta::Method::Destructor::new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_166::__ANON__[(eval 197)[Eval/Closure.pm:125]:4]";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::groups_to_contigs";
"Bio::Roary::Output::EmblGroups::_header_block" -> "Bio::Roary::Output::EmblGroups::groups_to_contigs";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::Output::EmblGroups::groups_to_contigs";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@3653";
"Bio::Roary::ContigsToGeneIDsFromGFF::new" -> "Bio::Roary::ContigsToGeneIDsFromGFF::__ANON__[lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm:24]";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::Dir::BEGIN@1574";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Attribute::_inline_clear_value";
"Safe::BEGIN@46" -> "Opcode::BEGIN@29";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@23";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::cdhit_groups_filename";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::BEGIN@4";
"Bio::Roary::SplitGroups::_find_paralogs" -> "Bio::Roary::SplitGroups::_genes_to_files";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "Bio::Roary::SplitGroups::_genes_to_files";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::GroupStatistics::_row";
"Class::Load::BEGIN@8" -> "Data::OptList::BEGIN@10";
"Graph::AdjacencyMap::_successors" -> "Graph::_edges";
"File::Temp::_gettemp" -> "File::Temp::safe_level";
"File::Temp::END" -> "File::Temp::cleanup";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::has_writer";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::has_writer";
"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@6";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@32";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_33::__ANON__[(eval 57)[Eval/Closure.pm:125]:52]";
"Bio::Tools::GFF::BEGIN@152" -> "Bio::SeqFeature::Generic::BEGIN@146";
"Bio::Roary::Output::EmblGroups::_groups_to_files" -> "Bio::Roary::Output::EmblGroups::_build__groups_to_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_419::__ANON__[(eval 589)[Eval/Closure.pm:125]:15]";
"Bio::Tools::GFF::BEGIN@150" -> "Bio::Seq::SeqFactory::BEGIN@80";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@17";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@118";
"Class::MOP::Method::Accessor::_initialize_body" -> "Moose::Meta::Method::Accessor::_generate_clearer_method";
"File::Path::BEGIN@6" -> "Cwd::CORE:match";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_142::__ANON__[(eval 167)[Eval/Closure.pm:125]:9]";
"File::Path::rmtree" -> "File::Path::CORE:match";
"Module::Runtime::require_module" -> "Class::Load::XS::BEGIN@6";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@14";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_168::__ANON__[(eval 199)[Eval/Closure.pm:125]:12]";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@18";
"Moose::BEGIN@38" -> "Moose::Meta::Role::Application::ToInstance::BEGIN@8";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_416::__ANON__[(eval 586)[Eval/Closure.pm:125]:16]";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:open";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::output_statistics_filename";
"Class::MOP::Mixin::HasAttributes::get_attribute_list" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Class::MOP::Mixin::HasAttributes::get_attribute" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Class::MOP::Class::get_all_attributes" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Class::MOP::Mixin::HasAttributes::remove_attribute" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Class::MOP::Mixin::HasAttributes::has_attribute" -> "Class::MOP::Mixin::HasAttributes::_attribute_map";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@13";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@39";
"Class::MOP::Mixin::HasOverloads::BEGIN@7" -> "Class::MOP::Overload::BEGIN@4";
"Bio::Roary::GroupStatistics::_non_unique_name_for_group" -> "Bio::Roary::GroupStatistics::CORE:match";
"Class::MOP::Package::BEGIN@8" -> "Devel::GlobalDestruction::BEGIN@4";
"Text::CSV::new" -> "Text::CSV_PP::new";
"Bio::Roary::OrderGenes::_build_number_of_files" -> "Bio::Roary::OrderGenes::gff_files";
"Bio::Roary::OrderGenes::_build__groups_to_file_contigs" -> "Bio::Roary::OrderGenes::gff_files";
"Moose::Meta::Attribute::BEGIN@13" -> "Moose::Meta::Method::Accessor::BEGIN@9";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2";
"base::import" -> "Bio::Location::FuzzyLocationI::BEGIN@78";
"Bio::Roary::AnnotateGroups::_ids_to_gene_names" -> "Bio::Roary::AnnotateGroups::_build__ids_to_gene_names";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:189]";
"Graph::_connected_components_compute" -> "Graph::Traversal::postorder";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Graph::Traversal::postorder";
"parent::import" -> "Class::MOP::Method::BEGIN@4";
"parent::import" -> "Class::MOP::Method::Inlined::BEGIN@5";
"Eval::Closure::BEGIN@7" -> "Eval::Closure::BEGIN@2";
"Module::Runtime::require_module" -> "Bio::Roary::ParseGFFAnnotationRole::BEGIN@10";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:389]" -> "Moose::Exporter::_late_curry_wrapper";
"Class::MOP::Class::linearized_isa" -> "mro::get_linear_isa";
"overload::mycan" -> "mro::get_linear_isa";
"Moose::init_meta" -> "mro::get_linear_isa";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Bio::Roary::GeneNamesFromGFF::BEGIN@65";
"Safe::BEGIN@46" -> "Opcode::BEGIN@12";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::AnnotateGroups::reannotate";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::BEGIN@197";
"base::import" -> "Bio::Root::RootI::BEGIN@2";
"Class::MOP::Class::try {...} " -> "Moose::Meta::Attribute::install_accessors";
"Class::MOP::Class::_inline_accessors" -> "Moose::Meta::Attribute::install_accessors";
"Graph::Traversal::next" -> "Graph::__ANON__[Graph.pm:2745]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_30::__ANON__[(eval 54)[Eval/Closure.pm:125]:9]";
"Sub::Exporter::_rewrite_build_config" -> "Data::OptList::mkopt_hash";
"Graph::Traversal::postorder" -> "Graph::Traversal::_order";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_84::__ANON__[(eval 109)[Eval/Closure.pm:125]:28]";
"Moose::Meta::Role::get_method_modifier_list" -> "Moose::Meta::Role::get_around_method_modifiers_map";
"Class::MOP::Package::add_package_symbol" -> "Class::MOP::Package::_package_stash";
"Class::MOP::Package::remove_package_symbol" -> "Class::MOP::Package::_package_stash";
"Class::MOP::Package::list_all_package_symbols" -> "Class::MOP::Package::_package_stash";
"Class::MOP::Package::get_package_symbol" -> "Class::MOP::Package::_package_stash";
"Class::MOP::Package::has_package_symbol" -> "Class::MOP::Package::_package_stash";
"Class::MOP::Package::get_or_add_package_symbol" -> "Class::MOP::Package::_package_stash";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@30";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@24";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_11::__ANON__[(eval 35)[Eval/Closure.pm:125]:9]";
"parent::import" -> "Class::MOP::Method::Inlined::BEGIN@4";
"Bio::Roary::AnalyseGroups::BUILD" -> "Bio::Roary::AnalyseGroups::_freq_groups_per_genome";
"Graph::Attribute::get_attribute" -> "Graph::Attribute::__ANON__[Graph/Attribute.pm:15]";
"File::Temp::_gettemp" -> "File::Temp::CORE:chmod";
"Bio::Tools::CodonTable::BEGIN@198" -> "Bio::SeqUtils::valid_aa";
"Graph::BEGIN@28" -> "Graph::AdjacencyMap::Heavy::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_16::__ANON__[(eval 40)[Eval/Closure.pm:125]:6]";
"Moose::Role::init_meta" -> "Moose::Util::TypeConstraints::role_type";
"Graph::_heap_walk" -> "Heap071::Fibonacci::top";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::CORE:subst";
"Moose::Exporter::_make_sub_exporter_params" -> "Moose::Exporter::_parse_trait_aliases";
"Class::MOP::Class::_inline_new_object" -> "Class::MOP::Class::_inline_fallback_constructor";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@4";
"Class::Load::BEGIN@8" -> "Data::OptList::BEGIN@11";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_310::__ANON__[(eval 453)[Eval/Closure.pm:125]:9]";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@145";
"Bio::Tools::GFF::BEGIN@151" -> "Bio::LocatableSeq::BEGIN@106";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@195";
"Try::Tiny::try" -> "Moose::Meta::Method::Accessor::try {...} ";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_333::__ANON__[(eval 476)[Eval/Closure.pm:125]:22]";
"Graph::BEGIN@42" -> "Safe::BEGIN@30";
"Data::OptList::BEGIN@10" -> "overload::BEGIN@85";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142";
"Moose::Meta::Attribute::_inline_check_lazy" -> "Moose::Meta::Mixin::AttributeCore::is_lazy";
"Moose::Meta::Class::_inline_init_attr_from_default" -> "Moose::Meta::Mixin::AttributeCore::is_lazy";
"MRO::Compat::BEGIN@10" -> "mro::BEGIN@10";
"Bio::Roary::CommandLine::RoaryPostAnalysis::core_definition" -> "Eval::Closure::Sandbox_433::CORE:match";
"Class::MOP::Method::Constructor::_eval_environment" -> "Class::MOP::Class::_eval_environment";
"Moose::Meta::Class::_eval_environment" -> "Class::MOP::Class::_eval_environment";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@2248";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_190::__ANON__[(eval 221)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@258";
"Bio::Roary::Output::NumberOfGroups::new" -> "Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:34]";
"Bio::Roary::Output::NumberOfGroups::new" -> "Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:32]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_9::__ANON__[(eval 33)[Eval/Closure.pm:125]:9]";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@14";
"Class::MOP::Class::_can_fix_metaclass_incompatibility" -> "Class::MOP::Class::_single_metaclass_can_be_made_compatible";
"parent::import" -> "Class::MOP::Package::BEGIN@9";
"File::Path::_rmtree" -> "File::Path::CORE:rmdir";
"Exporter::Heavy::heavy_export_tags" -> "Exporter::Heavy::_push_tags";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::SplitGroups::DESTROY";
"Class::MOP::Mixin::HasOverloads::BEGIN@9" -> "Devel::OverloadInfo::BEGIN@15";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@240";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@9";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@11";
"Graph::BEGIN@42" -> "Safe::BEGIN@3";
"Sub::Exporter::_rewrite_build_config" -> "Sub::Exporter::_assert_collector_names_ok";
"Moose::Meta::Class::_process_new_attribute" -> "Moose::Meta::Attribute::interpolate_class_and_new";
"Moose::Meta::Role::Attribute::attribute_for_class" -> "Moose::Meta::Attribute::interpolate_class_and_new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_92::__ANON__[(eval 117)[Eval/Closure.pm:125]:9]";
"Moose::Util::TypeConstraints::import" -> "Moose::Exporter::_strip_meta_name";
"Moose::import" -> "Moose::Exporter::_strip_meta_name";
"Moose::Role::import" -> "Moose::Exporter::_strip_meta_name";
"Graph::_MST_add" -> "Heap071::Fibonacci::add";
"Graph::TransitiveClosure::BEGIN@10" -> "Graph::TransitiveClosure::Matrix::BEGIN@3";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@13";
"Moose::BEGIN@40" -> "Moose::Util::TypeConstraints::import";
"Moose::Role::BEGIN@18" -> "Moose::Util::TypeConstraints::import";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Class::MOP::Mixin::HasMethods::method_metaclass";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Class::MOP::Mixin::HasMethods::method_metaclass";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Class::MOP::Mixin::HasMethods::method_metaclass";
"List::Util::all" -> "Class::MOP::Mixin::HasMethods::method_metaclass";
"Class::MOP::Mixin::HasMethods::wrap_method_body" -> "Class::MOP::Mixin::HasMethods::method_metaclass";
"Class::MOP::Class::BEGIN@7" -> "Class::MOP::Instance::BEGIN@7";
"base::import" -> "Bio::SeqI::BEGIN@111";
"Class::MOP::Module::create" -> "Class::MOP::Package::create";
"Class::MOP::Mixin::HasOverloads::BEGIN@9" -> "Devel::OverloadInfo::BEGIN@20";
"Bio::Roary::SplitGroups::new" -> "Bio::Roary::SplitGroups::__ANON__[lib/Bio/Roary/SplitGroups.pm:38]";
"File::Path::BEGIN@6" -> "Cwd::BEGIN@842";
"Bio::Roary::ContigsToGeneIDsFromGFF::meta" -> "Scalar::Util::blessed";
"Bio::Roary::GroupStatistics::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::OrderGenes::new" -> "Scalar::Util::blessed";
"Class::MOP::class_of" -> "Scalar::Util::blessed";
"Class::MOP::Class::_construct_instance" -> "Scalar::Util::blessed";
"Moose::Meta::Method::Destructor::is_needed" -> "Scalar::Util::blessed";
"Moose::Meta::TypeCoercion::Union::meta" -> "Scalar::Util::blessed";
"Class::MOP::Method::wrap" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_analyse_groups_obj" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::_new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Registry::add_type_constraint" -> "Scalar::Util::blessed";
"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::ToClass::meta" -> "Scalar::Util::blessed";
"Bio::Roary::ContigsToGeneIDsFromGFF::DESTROY" -> "Scalar::Util::blessed";
"Moose::Util::TypeConstraints::find_type_constraint" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Parameterizable::_new" -> "Scalar::Util::blessed";
"Bio::Roary::InflateClusters::new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeCoercion::meta" -> "Scalar::Util::blessed";
"Bio::Roary::GeneNamesFromGFF::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_inflate_clusters_obj" -> "Scalar::Util::blessed";
"Class::MOP::Method::clone" -> "Scalar::Util::blessed";
"Bio::Roary::GroupLabels::new" -> "Scalar::Util::blessed";
"Class::MOP::Method::Wrapped::wrap" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Parameterized::_new" -> "Scalar::Util::blessed";
"Class::MOP::Mixin::meta" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::meta" -> "Scalar::Util::blessed";
"Moose::Util::_apply_all_roles" -> "Scalar::Util::blessed";
"Bio::Roary::ContigsToGeneIDsFromGFF::new" -> "Scalar::Util::blessed";
"Bio::Roary::GroupLabels::meta" -> "Scalar::Util::blessed";
"Sub::Install::_CODELIKE" -> "Scalar::Util::blessed";
"Bio::Roary::CommandLine::RoaryPostAnalysis::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_group_statistics_obj" -> "Scalar::Util::blessed";
"Bio::Roary::GroupStatistics::meta" -> "Scalar::Util::blessed";
"Bio::Roary::SplitGroups::new" -> "Scalar::Util::blessed";
"Bio::Roary::Output::EmblGroups::meta" -> "Scalar::Util::blessed";
"Bio::Roary::SplitGroups::DESTROY" -> "Scalar::Util::blessed";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Scalar::Util::blessed";
"Bio::Roary::OrderGenes::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::GroupStatistics::new" -> "Scalar::Util::blessed";
"Moose::Meta::Role::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Class::add_role_application" -> "Scalar::Util::blessed";
"Moose::Meta::Attribute::_process_isa_option" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Parameterizable::meta" -> "Scalar::Util::blessed";
"Class::MOP::Mixin::HasMethods::get_method" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint" -> "Scalar::Util::blessed";
"Bio::Roary::GroupLabels::DESTROY" -> "Scalar::Util::blessed";
"Class::MOP::Mixin::HasMethods::add_method" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Method::Required::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Attribute::attach_to_role" -> "Scalar::Util::blessed";
"Bio::Roary::Output::GroupsMultifastasNucleotide::meta" -> "Scalar::Util::blessed";
"Class::MOP::Attribute::attach_to_class" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Enum::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Method::_new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Union::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::_new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Role::_new" -> "Scalar::Util::blessed";
"Bio::Roary::SplitGroups::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Instance::_new" -> "Scalar::Util::blessed";
"Bio::Roary::AnalyseGroups::new" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_number_of_groups_obj" -> "Scalar::Util::blessed";
"Bio::Roary::Output::NumberOfGroups::DESTROY" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::RoleSummation::meta" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::Output::NumberOfGroups::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Composite::meta" -> "Scalar::Util::blessed";
"Class::MOP::Instance::BUILDARGS" -> "Scalar::Util::blessed";
"Bio::Roary::CommandLine::RoaryPostAnalysis::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Class::add_attribute" -> "Scalar::Util::blessed";
"Bio::Roary::GroupStatistics::_text_csv_obj" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_annotate_groups_obj" -> "Scalar::Util::blessed";
"Class::MOP::Mixin::HasMethods::remove_method" -> "Scalar::Util::blessed";
"Moose::Meta::Role::add_attribute" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Role::meta" -> "Scalar::Util::blessed";
"Bio::Roary::AnnotateGroups::new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Parameterized::meta" -> "Scalar::Util::blessed";
"Bio::Roary::AnnotateGroups::meta" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_group_labels_obj" -> "Scalar::Util::blessed";
"Bio::Roary::OrderGenes::group_graphs" -> "Scalar::Util::blessed";
"Bio::Roary::Output::GroupsMultifastaNucleotide::meta" -> "Scalar::Util::blessed";
"Bio::Roary::GeneNamesFromGFF::new" -> "Scalar::Util::blessed";
"Bio::Roary::AnalyseGroups::DESTROY" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Class::_new" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Class::meta" -> "Scalar::Util::blessed";
"Bio::Roary::InflateClusters::meta" -> "Scalar::Util::blessed";
"Bio::Roary::CommandLine::RoaryPostAnalysis::new" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_order_genes_obj" -> "Scalar::Util::blessed";
"Bio::Roary::Output::EmblGroups::DESTROY" -> "Scalar::Util::blessed";
"Bio::Roary::OrderGenes::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Class::add_role" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::meta" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::Registry::meta" -> "Scalar::Util::blessed";
"Class::MOP::Object::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::ToRole::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::meta" -> "Scalar::Util::blessed";
"Bio::Roary::Output::EmblGroups::new" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::ToClass::_new" -> "Scalar::Util::blessed";
"Bio::Roary::Output::NumberOfGroups::new" -> "Scalar::Util::blessed";
"Bio::Roary::GeneNamesFromGFF::meta" -> "Scalar::Util::blessed";
"Bio::Roary::AnalyseGroups::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Attribute::_new" -> "Scalar::Util::blessed";
"Moose::Meta::Role::apply" -> "Scalar::Util::blessed";
"Bio::Roary::InflateClusters::DESTROY" -> "Scalar::Util::blessed";
"Moose::Meta::TypeConstraint::DuckType::meta" -> "Scalar::Util::blessed";
"Bio::Roary::AnnotateGroups::DESTROY" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Application::ToInstance::meta" -> "Scalar::Util::blessed";
"Moose::Meta::Role::Method::_new" -> "Scalar::Util::blessed";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Scalar::Util::blessed";
"Bio::Roary::PostAnalysis::_split_groups_obj" -> "Scalar::Util::blessed";
"Class::MOP::Method::Constructor::new" -> "Scalar::Util::blessed";
"Class::MOP::Method::Accessor::new" -> "Scalar::Util::blessed";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
"List::Util::all" -> "Class::MOP::Mixin::HasMethods::wrapped_method_metaclass";
"Bio::Roary::PostAnalysis::_build__analyse_groups_obj" -> "Bio::Roary::PostAnalysis::fasta_files";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::fasta_files";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::apply_around_method_modifiers";
"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::BEGIN@10";
"Moose::Util::TypeConstraints::BEGIN@28" -> "Moose::Meta::TypeConstraint::Class::BEGIN@5";
"Moose::Meta::Method::Accessor::_generate_accessor_method" -> "Class::MOP::Method::Accessor::_generate_accessor_method_inline";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_accessor_method_inline";
"Class::MOP::Attribute::get_raw_value" -> "Class::MOP::Instance::get_slot_value";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@8";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@20";
"parent::import" -> "Bio::Factory::SequenceStreamI::BEGIN@78";
"Opcode::_init_optags" -> "Opcode::CORE:close";
"Bio::Roary::GroupStatistics::_build__text_csv_obj" -> "Text::CSV::new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_290::__ANON__[(eval 416)[Eval/Closure.pm:125]:26]";
"Package::DeprecationManager::BEGIN@10" -> "List::MoreUtils::BEGIN@5";
"Bio::Roary::Output::NumberOfGroups::new" -> "Eval::Closure::Sandbox_281::CORE:match";
"Moose::BEGIN@9" -> "Scalar::Util::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_422::__ANON__[(eval 592)[Eval/Closure.pm:125]:16]";
"re::import" -> "re::bits";
"Opcode::_init_optags" -> "Opcode::full_opset";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@19";
"Bio::Roary::GroupStatistics::_output_fh" -> "Bio::Roary::GroupStatistics::_build__output_fh";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToRole::meta";
"Moose::Meta::Attribute::_inline_set_value" -> "Moose::Meta::Attribute::_inline_trigger";
"Graph::AdjacencyMap::_successors" -> "Graph::_edges_from";
"File::Spec::Unix::_tmpdir" -> "File::Spec::Unix::CORE:ftewrite";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_216::__ANON__[(eval 317)[Eval/Closure.pm:125]:29]";
"FindBin::init" -> "FindBin::cwd2";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@15";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_161::__ANON__[(eval 192)[Eval/Closure.pm:125]:22]";
"Bio::Root::IO::BEGIN@75" -> "File::Spec::Unix::rootdir";
"Class::MOP::Attribute::initialize_instance_slot" -> "Class::MOP::Attribute::_set_initial_slot_value";
"Moose::BEGIN@11" -> "Module::Runtime::BEGIN@296";
"utf8::AUTOLOAD" -> "utf8::BEGIN@3";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@5";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@15";
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"Bio::Roary::AnalyseGroups::_builder__files_to_genes" -> "Bio::Roary::AnalyseGroups::_genes_to_file";
"Bio::Roary::Output::EmblGroups::_build__groups_to_files" -> "Bio::Roary::AnalyseGroups::_genes_to_file";
"Bio::Roary::SplitGroups::_build__genes_to_files" -> "Bio::Roary::AnalyseGroups::_genes_to_file";
"Bio::Roary::GroupStatistics::_build__groups_to_files" -> "Bio::Roary::AnalyseGroups::_genes_to_file";
"Bio::Roary::AnalyseGroups::_count_num_files_in_group" -> "Bio::Roary::AnalyseGroups::_genes_to_file";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_93::__ANON__[(eval 118)[Eval/Closure.pm:125]:9]";
"Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]" -> "Class::MOP::Class:::around";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@6";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@25";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_428::__ANON__[(eval 598)[Eval/Closure.pm:125]:16]";
"base::import" -> "Bio::LocationI::BEGIN@77";
"Bio::Roary::PostAnalysis::_group_labels_obj" -> "Bio::Roary::PostAnalysis::_build__group_labels_obj";
"Devel::StackTrace::BEGIN@10" -> "Devel::StackTrace::Frame::BEGIN@7";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::BEGIN@6";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@10";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@26";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@6";
"Moose::Util::TypeConstraints::BEGIN@25" -> "Moose::Meta::TypeConstraint::Union::BEGIN@10";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@13";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_178::__ANON__[(eval 209)[Eval/Closure.pm:125]:123]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_171::__ANON__[(eval 202)[Eval/Closure.pm:125]:26]";
"parent::import" -> "Moose::Meta::Method::BEGIN@7";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:140]" -> "Class::MOP::Package::has_package_symbol";
"Moose::Exporter::build_import_methods" -> "Class::MOP::Package::has_package_symbol";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Package::has_package_symbol";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_417::__ANON__[(eval 587)[Eval/Closure.pm:125]:15]";
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"Moose::Meta::TypeConstraint::Parameterized::_inline_check" -> "Moose::Meta::TypeConstraint::Parameterized::type_parameter";
"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined" -> "Moose::Meta::TypeConstraint::Parameterized::type_parameter";
"Moose::Meta::TypeConstraint::Parameterized::inline_environment" -> "Moose::Meta::TypeConstraint::Parameterized::type_parameter";
"Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for" -> "Moose::Meta::TypeConstraint::Parameterized::type_parameter";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::BEGIN@20";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::_clustered_genes";
"Bio::Roary::InflateClusters::_inflate_gene" -> "Bio::Roary::InflateClusters::_clustered_genes";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@4";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::BEGIN@19";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::_new";
"Bio::Roary::InflateClusters::_output_fh" -> "Bio::Roary::InflateClusters::_build__output_fh";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::BEGIN@628";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@15";
"Graph::Traversal::configure" -> "Graph::Traversal::graph";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@15";
"parent::import" -> "Moose::Meta::Method::BEGIN@4";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_179::__ANON__[(eval 210)[Eval/Closure.pm:125]:9]";
"Module::Runtime::require_module" -> "Bio::Roary::CommandLine::Common::BEGIN@38";
"Class::Load::BEGIN@7" -> "base::BEGIN@3";
"Graph::Traversal::new" -> "Graph::Traversal::reset";
"Class::Load::BEGIN@9" -> "Module::Implementation::BEGIN@6";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@27";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_230::__ANON__[(eval 347)[Eval/Closure.pm:125]:22]";
"Moose::Meta::Class::BEGIN@18" -> "Moose::Meta::Method::Meta::BEGIN@7";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::CORE:open";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@46";
"Opcode::_init_optags" -> "Opcode::opset_to_ops";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_319::__ANON__[(eval 462)[Eval/Closure.pm:125]:22]";
"parent::import" -> "Class::MOP::Object::BEGIN@8";
"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::BEGIN@8";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Moose::has";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Moose::has";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Moose::has";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Moose::has";
"Moose::has" -> "Moose::has";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Moose::has";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Moose::has";
"Bio::LocatableSeq::BEGIN@106" -> "Bio::Location::Fuzzy::BEGIN@84";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_121::__ANON__[(eval 146)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@12";
"Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for" -> "Moose::Meta::TypeConstraint::Parameterizable::constraint_generator";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_360::__ANON__[(eval 503)[Eval/Closure.pm:125]:18]";
"Eval::Closure::BEGIN@7" -> "Eval::Closure::BEGIN@1";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_49::__ANON__[(eval 73)[Eval/Closure.pm:125]:4]";
"Moose::BEGIN@28" -> "Moose::Meta::Instance::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@4";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@287";
"Moose::BEGIN@10" -> "Carp::BEGIN@6";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_77::__ANON__[(eval 102)[Eval/Closure.pm:125]:11]";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@6";
"Try::Tiny::try" -> "Class::MOP::Class::try {...} ";
"Bio::Roary::AnnotateGroups::consensus_product_for_id_names" -> "Bio::Roary::AnnotateGroups::CORE:sort";
"Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names" -> "Bio::Roary::AnnotateGroups::CORE:sort";
"Bio::Roary::AnnotateGroups::reannotate" -> "Bio::Roary::AnnotateGroups::CORE:sort";
"Bio::Roary::AnnotateGroups::_consensus_gene_name_for_group" -> "Bio::Roary::AnnotateGroups::CORE:sort";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_205::__ANON__[(eval 306)[Eval/Closure.pm:125]:12]";
"Bio::Roary::OrderGenes::_remove_weak_edges_from_graph" -> "Bio::Roary::OrderGenes::_percentage_of_largest_weak_threshold";
"Module::Runtime::require_module" -> "Moose::Role::has";
"Moose::Role::has" -> "Moose::Role::has";
"parent::import" -> "Class::MOP::Object::BEGIN@5";
"Bio::Roary::Output::EmblGroups::_output_header_fh" -> "Bio::Roary::Output::EmblGroups::_build__output_header_fh";
"File::Spec::Unix::_tmpdir" -> "File::Spec::Unix::CORE:ftdir";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::OrderGenes::DESTROY";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Attribute::accessor_metaclass";
"Class::MOP::Attribute::try {...} " -> "Class::MOP::Attribute::accessor_metaclass";
"warnings::register_categories" -> "warnings::_mkMask";
"Moose::Meta::Attribute::_inline_init_from_default" -> "Moose::Meta::Attribute::_inline_check_coercion";
"Moose::Meta::Attribute::_inline_tc_code" -> "Moose::Meta::Attribute::_inline_check_coercion";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_isa_option";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::ConfigDefaults";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_297::__ANON__[(eval 440)[Eval/Closure.pm:125]:12]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_180::__ANON__[(eval 211)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_90::__ANON__[(eval 115)[Eval/Closure.pm:125]:9]";
"Getopt::Long::GetOptionsFromArray" -> "Getopt::Long::FindOption";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@9";
"Class::MOP::Class::BEGIN@7" -> "Class::MOP::Instance::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_215::__ANON__[(eval 316)[Eval/Closure.pm:125]:29]";
"Class::Load::BEGIN@8" -> "Data::OptList::BEGIN@100";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@16";
"Class::MOP::BEGIN@15" -> "Class::MOP::Mixin::HasAttributes::BEGIN@9";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@17";
"Moose::Meta::TypeConstraint::equals" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:8]";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "Class::MOP::Class::find_next_method_by_name";
"Class::MOP::Method::Inlined::can_be_inlined" -> "Class::MOP::Class::find_next_method_by_name";
"Bio::Roary::AnnotateGroups::consensus_product_for_id_names" -> "Bio::Roary::AnnotateGroups::_ids_to_product";
"Bio::Roary::AnnotateGroups::_build__ids_to_gene_names" -> "Bio::Roary::AnnotateGroups::_ids_to_product";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:52]";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::accessory_ordering_key";
"Moose::Meta::Class::BEGIN@15" -> "Moose::Meta::Class::Immutable::Trait::BEGIN@7";
"Text::CSV::_load_pp" -> "Text::CSV_PP::BEGIN@12";
"Bio::Roary::ParseGFFAnnotationRole::_build__awk_filter" -> "Bio::Roary::GeneNamesFromGFF::_tags_to_filter";
"Class::MOP::Mixin::HasMethods::get_method" -> "Class::MOP::Mixin::HasMethods::wrap_method_body";
"DynaLoader::bootstrap" -> "Clone::bootstrap";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@14";
"Moose::BEGIN@38" -> "Moose::Meta::Role::Application::ToInstance::BEGIN@11";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_312::__ANON__[(eval 455)[Eval/Closure.pm:125]:4]";
"Bio::Roary::GeneNamesFromGFF::_awk_filter" -> "Bio::Roary::ParseGFFAnnotationRole::_build__awk_filter";
"DynaLoader::BEGIN@22" -> "version::(cmp";
"Moose::BEGIN@34" -> "Moose::Meta::Role::Application::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_264::__ANON__[(eval 390)[Eval/Closure.pm:125]:21]";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@2";
"Bio::Roary::AnnotateGroups::BEGIN@25" -> "File::Grep::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_421::__ANON__[(eval 591)[Eval/Closure.pm:125]:16]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_345::__ANON__[(eval 488)[Eval/Closure.pm:125]:8]";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::BEGIN@11";
"main::RUNTIME" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_167::__ANON__[(eval 198)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Attribute::_inline_weaken_value" -> "Moose::Meta::Mixin::AttributeCore::is_weak_ref";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_262::__ANON__[(eval 388)[Eval/Closure.pm:125]:9]";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@4";
"Moose::Meta::Role::get_method_modifier_list" -> "Moose::Meta::Role::get_after_method_modifiers_map";
"Bio::Root::Root::BEGIN@3" -> "Bio::Root::IO::BEGIN@5";
"Graph::Traversal::reset" -> "Graph::directed";
"base::import" -> "Bio::AnnotatableI::BEGIN@86";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_153::__ANON__[(eval 184)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_51::__ANON__[(eval 75)[Eval/Closure.pm:125]:4]";
"Graph::BEGIN@28" -> "Graph::AdjacencyMap::Heavy::BEGIN@12";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::_inflate_line";
"Module::Runtime::require_module" -> "Class::Load::XS::BEGIN@9";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@1733";
"constant::import" -> "constant::CORE:match";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@483";
"Text::CSV_PP::print" -> "IO::Handle::print";
"Moose::Meta::TypeConstraint::Parameterizable::generate_inline_for" -> "Moose::Meta::TypeConstraint::Parameterizable::has_inline_generator";
"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined" -> "Moose::Meta::TypeConstraint::Parameterizable::has_inline_generator";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_213::__ANON__[(eval 314)[Eval/Closure.pm:125]:26]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_377::__ANON__[(eval 520)[Eval/Closure.pm:125]:26]";
"Moose::Util::_apply_all_roles" -> "Moose::Meta::Role::apply";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_67::__ANON__[(eval 92)[Eval/Closure.pm:125]:6]";
"Safe::BEGIN@46" -> "Opcode::_init_optags";
"Bio::Roary::AnalyseGroups::_builder__files_to_genes" -> "Bio::Roary::AnalyseGroups::CORE:open";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::CORE:open";
"Bio::Roary::AnalyseGroups::_builder__groups_to_genes" -> "Bio::Roary::AnalyseGroups::CORE:open";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Attribute::_inline_get_value";
"parent::import" -> "Bio::Factory::SequenceStreamI::BEGIN@80";
"Moose::Meta::Attribute::BEGIN@6" -> "B::BEGIN@17";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:184]";
"Moose::Meta::Role::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:184]";
"Class::MOP::Attribute::new" -> "Class::MOP::Attribute::_new";
"Moose::Meta::Role::BEGIN@11" -> "Moose::Meta::Role::Attribute::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::CallBack::BEGIN@1544";
"Class::MOP::Method::Accessor::_generate_accessor_method_inline" -> "Try::Tiny::try";
"Class::MOP::Method::Accessor::_generate_writer_method_inline" -> "Try::Tiny::try";
"Moose::Meta::Method::Destructor::_initialize_body" -> "Try::Tiny::try";
"Class::MOP::Method::Accessor::_generate_clearer_method_inline" -> "Try::Tiny::try";
"Moose::Meta::Method::Accessor::_compile_code" -> "Try::Tiny::try";
"Class::MOP::Attribute::_process_accessors" -> "Try::Tiny::try";
"Class::MOP::Method::Constructor::_generate_constructor_method_inline" -> "Try::Tiny::try";
"Module::Implementation::_load_implementation" -> "Try::Tiny::try";
"Class::MOP::Class::_post_add_attribute" -> "Try::Tiny::try";
"Class::MOP::Method::Accessor::_generate_reader_method_inline" -> "Try::Tiny::try";
"Class::MOP::Method::Accessor::_generate_predicate_method_inline" -> "Try::Tiny::try";
"base::import" -> "Bio::DescribableI::BEGIN@70";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::CORE:subst";
"Bio::Roary::Output::EmblGroups::_build_output_header_filename" -> "Bio::Roary::Output::EmblGroups::CORE:subst";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::BEGIN@266";
"Bio::Root::IO::BEGIN@75" -> "Exporter::export_tags";
"Moose::Exporter::_follow_also" -> "Moose::Exporter::_die_if_cycle_found_in_also_list_for_package";
"parent::import" -> "Class::MOP::Method::BEGIN@14";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::where";
"base::import" -> "Bio::PrimarySeq::BEGIN@133";
"Moose::Util::TypeConstraints::find_or_parse_type_constraint" -> "Moose::Util::TypeConstraints::create_parameterized_type_constraint";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::new";
"parent::import" -> "Moose::Meta::Mixin::AttributeCore::BEGIN@4";
"Bio::Roary::AnnotateGroups::_build__ids_to_gene_names" -> "Bio::Roary::GeneNamesFromGFF::ids_to_gene_name";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@10";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@7";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@11";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Class::is_mutable";
"Class::MOP::Class::make_immutable" -> "Class::MOP::Class::is_mutable";
"Moose::Meta::Attribute::BEGIN@16" -> "Class::MOP::Class::is_mutable";
"base::import" -> "Bio::Factory::ObjectBuilderI::BEGIN@98";
"Class::MOP::Class::find_attribute_by_name" -> "Class::MOP::Mixin::HasAttributes::has_attribute";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Mixin::HasAttributes::has_attribute";
"Moose::Meta::Role::Application::ToClass::apply_attributes" -> "Class::MOP::Mixin::HasAttributes::has_attribute";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::meta";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::BEGIN@5";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_75::__ANON__[(eval 100)[Eval/Closure.pm:125]:25]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_241::__ANON__[(eval 358)[Eval/Closure.pm:125]:4]";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::_true_orthologs";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_true_orthologs";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@18";
"Text::CSV_PP::_combine" -> "Text::CSV_PP::CORE:qr";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::TypeConstraint::Parameterized::inline_environment";
"Moose::Meta::Class::_eval_environment" -> "Moose::Meta::TypeConstraint::Parameterized::inline_environment";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Moose::Meta::TypeConstraint::Parameterized::inline_environment";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_122::__ANON__[(eval 147)[Eval/Closure.pm:125]:31]";
"Exporter::as_heavy" -> "Exporter::Heavy::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@35";
"Moose::Meta::Method::Accessor::_generate_reader_method" -> "Class::MOP::Method::Accessor::_generate_reader_method_inline";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_reader_method_inline";
"Graph::BEGIN@34" -> "Graph::MSTHeapElem::BEGIN@5";
"Graph::BEGIN@31" -> "Graph::UnionFind::BEGIN@3";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::_non_unique_name_for_group";
"parent::import" -> "Class::MOP::Method::Inlined::BEGIN@9";
"Class::MOP::Package::BEGIN@8" -> "Devel::GlobalDestruction::BEGIN@8";
"constant::BEGIN@25" -> "constant::BEGIN@36";
"File::Spec::Unix::_tmpdir" -> "File::Spec::Unix::canonpath";
"File::Spec::Unix::catfile" -> "File::Spec::Unix::canonpath";
"File::Spec::Unix::catdir" -> "File::Spec::Unix::canonpath";
"Moose::Meta::Role::Application::ToClass::_new" -> "Moose::Meta::Role::Application::__ANON__[Moose/Meta/Role/Application.pm:23]";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::RoleSummation::meta";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::BEGIN@5";
"Graph::TransitiveClosure::Matrix::BEGIN@5" -> "Graph::AdjacencyMatrix::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_154::__ANON__[(eval 185)[Eval/Closure.pm:125]:4]";
"Class::MOP::Class::_superclasses_updated" -> "Class::MOP::Class::_superclass_metas";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@16";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::CORE:readline";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::output_raw_filename_total_genes";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17";
"base::import" -> "Bio::DB::RandomAccessI::BEGIN@66";
"Safe::BEGIN@46" -> "Opcode::BEGIN@15";
"Moose::init_meta" -> "Class::Load::XS::is_class_loaded";
"Moose::Role::init_meta" -> "Class::Load::XS::is_class_loaded";
"Class::MOP::Mixin::HasMethods::BEGIN@7" -> "Class::MOP::Method::Meta::BEGIN@7";
"Class::MOP::Method::Generated::_compile_code" -> "Eval::Closure::eval_closure";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Eval::Closure::eval_closure";
"Graph::BEGIN@33" -> "Graph::Traversal::DFS::BEGIN@3";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_366::__ANON__[(eval 509)[Eval/Closure.pm:125]:13]";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Class::MOP::Class::superclasses";
"Class::MOP::Class::create" -> "Class::MOP::Class::superclasses";
"Class::MOP::Class::_superclasses_updated" -> "Class::MOP::Class::superclasses";
"Moose::Meta::Class::superclasses" -> "Class::MOP::Class::superclasses";
"Moose::Meta::Attribute::_inline_init_from_default" -> "Moose::Meta::Attribute::_inline_weaken_value";
"Moose::Meta::Attribute::_inline_set_value" -> "Moose::Meta::Attribute::_inline_weaken_value";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_129::__ANON__[(eval 154)[Eval/Closure.pm:125]:9]";
"Graph::_edges" -> "Graph::omniedged";
"Graph::expect_undirected" -> "Graph::omniedged";
"Bio::Roary::Output::EmblGroups::_sorted_file_names" -> "Bio::Roary::Output::EmblGroups::_build__sorted_file_names";
"Bio::Roary::CommandLine::Common::BEGIN@13" -> "FindBin::BEGIN@83";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@95";
"Moose::Meta::Role::Application::ToClass::apply" -> "Moose::Meta::Role::Application::apply";
"Moose::Meta::Role::Composite::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::Application::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Union::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Registry::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Class::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Enum::BEGIN@6" -> "metaclass::import";
"Moose::Object::BEGIN@16" -> "metaclass::import";
"Moose::Meta::Role::Application::ToRole::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeCoercion::Union::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::Application::ToClass::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeCoercion::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@6" -> "metaclass::import";
"Moose::Meta::Role::Method::Required::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@6" -> "metaclass::import";
"Moose::Meta::TypeConstraint::Role::BEGIN@6" -> "metaclass::import";
"Moose::BEGIN@37" -> "Moose::Meta::Role::Application::ToRole::BEGIN@6";
"Graph::Traversal::visit" -> "Graph::__ANON__[Graph.pm:2754]";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@10";
"Bio::Root::IO::BEGIN@75" -> "Fcntl::O_EXLOCK";
"File::Spec::Unix::file_name_is_absolute" -> "File::Spec::Unix::CORE:match";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::help";
"Moose::Util::TypeConstraints::import" -> "Moose::Exporter::_apply_metaroles";
"Moose::import" -> "Moose::Exporter::_apply_metaroles";
"Moose::Role::import" -> "Moose::Exporter::_apply_metaroles";
"Class::MOP::Class::_superclasses_updated" -> "Class::MOP::Class::update_meta_instance_dependencies";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_274::__ANON__[(eval 400)[Eval/Closure.pm:125]:13]";
"Graph::BEGIN@42" -> "Safe::BEGIN@282";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@219";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_367::__ANON__[(eval 510)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_94::__ANON__[(eval 119)[Eval/Closure.pm:125]:9]";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_323::__ANON__[(eval 466)[Eval/Closure.pm:125]:123]";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@16";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@3721";
"Eval::Closure::_validate_env" -> "Eval::Closure::CORE:match";
"Class::MOP::Method::Accessor::_generate_accessor_method_inline" -> "Try::Tiny::catch";
"Class::MOP::Method::Accessor::_generate_writer_method_inline" -> "Try::Tiny::catch";
"Moose::Meta::Method::Destructor::_initialize_body" -> "Try::Tiny::catch";
"Class::MOP::Method::Accessor::_generate_clearer_method_inline" -> "Try::Tiny::catch";
"Moose::Meta::Method::Accessor::_compile_code" -> "Try::Tiny::catch";
"Class::MOP::Attribute::_process_accessors" -> "Try::Tiny::catch";
"Class::MOP::Method::Constructor::_generate_constructor_method_inline" -> "Try::Tiny::catch";
"Module::Implementation::_load_implementation" -> "Try::Tiny::catch";
"Class::MOP::Class::_post_add_attribute" -> "Try::Tiny::catch";
"Class::MOP::Method::Accessor::_generate_reader_method_inline" -> "Try::Tiny::catch";
"Class::MOP::Method::Accessor::_generate_predicate_method_inline" -> "Try::Tiny::catch";
"Bio::Roary::AnnotateGroups::_ids_grouped_by_gene_name_for_group" -> "Bio::Roary::AnnotateGroups::_ids_to_gene_names";
"Bio::Roary::AnnotateGroups::BUILD" -> "Bio::Roary::AnnotateGroups::_ids_to_gene_names";
"Bio::Roary::AnnotateGroups::_consensus_gene_name_for_group" -> "Bio::Roary::AnnotateGroups::_ids_grouped_by_gene_name_for_group";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@51";
"Exporter::Heavy::heavy_export" -> "Exporter::Heavy::_rebuild_cache";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_354::__ANON__[(eval 497)[Eval/Closure.pm:125]:18]";
"Class::MOP::Class::_inline_generate_instance" -> "Class::MOP::Class::_inline_create_instance";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_accessor_method";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_150::__ANON__[(eval 175)[Eval/Closure.pm:125]:4]";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::_load_xs";
"Class::MOP::Instance::_class_name" -> "Class::MOP::Instance::associated_metaclass";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::output_raw_filename_conserved_genes";
"Class::Load::BEGIN@7" -> "base::BEGIN@4";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::BEGIN@20";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_40::__ANON__[(eval 64)[Eval/Closure.pm:125]:9]";
"Moose::Deprecated::BEGIN@7" -> "Package::DeprecationManager::BEGIN@7";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@11";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_138::__ANON__[(eval 163)[Eval/Closure.pm:125]:9]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@1";
"Data::OptList::BEGIN@10" -> "Params::Util::BEGIN@65";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@37";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@15";
"base::import" -> "Bio::Root::RootI::BEGIN@549";
"Moose::BEGIN@26" -> "Moose::Meta::Attribute::new";
"Moose::Meta::Attribute::interpolate_class_and_new" -> "Moose::Meta::Attribute::new";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@17";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Moose::Meta::Method::Meta::wrap";
"Class::MOP::Class::Immutable::Class::MOP::Class::_method_map" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
"Class::MOP::Class::Immutable::Class::MOP::Class::get_all_attributes" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
"Class::MOP::Class::Immutable::Class::MOP::Class::get_meta_instance" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
"Class::MOP::Class::Immutable::Class::MOP::Class::linearized_isa" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
"Class::MOP::Class::Immutable::Class::MOP::Class::is_immutable" -> "Class::MOP::Method::Wrapped::__ANON__[Class/MOP/Method/Wrapped.pm:158]";
"Class::MOP::Mixin::HasMethods::BEGIN@7" -> "Class::MOP::Method::Meta::BEGIN@12";
"Carp::get_status" -> "Carp::trusts_directly";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@17";
"Text::CSV::_load_pp" -> "Text::CSV::ErrorDiag::BEGIN@1088";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_21::__ANON__[(eval 45)[Eval/Closure.pm:125]:6]";
"Class::MOP::Mixin::AttributeCore::default" -> "Class::MOP::__ANON__[Class/MOP.pm:243]";
"Moose::Meta::Role::_new" -> "Class::MOP::__ANON__[Class/MOP.pm:243]";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@23";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::SplitGroups::new";
"Bio::Location::Atomic::BEGIN@79" -> "Bio::Location::WidestCoordPolicy::BEGIN@77";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@17";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_420::__ANON__[(eval 590)[Eval/Closure.pm:125]:16]";
"Moose::Meta::Role::apply" -> "Moose::Util::_load_user_class";
"Moose::Meta::Class::superclasses" -> "Moose::Util::_load_user_class";
"Bio::Roary::AnnotateGroups::BEGIN@25" -> "File::Grep::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_86::__ANON__[(eval 111)[Eval/Closure.pm:125]:9]";
"File::Temp::Dir::DESTROY" -> "File::Temp::Dir::unlink_on_destroy";
"Class::MOP::Class::BEGIN@11" -> "Class::MOP::MiniTrait::BEGIN@5";
"Heap071::Fibonacci::extract_top" -> "Heap071::Fibonacci::consolidate";
"Bio::Roary::AnnotateGroups::_build__ids_to_gene_names" -> "Bio::Roary::GeneNamesFromGFF::ids_to_product";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::ids_to_product";
"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@14";
"Moose::Exporter::_strip_meta_name" -> "List::MoreUtils::firstidx";
"Moose::Exporter::_strip_traits" -> "List::MoreUtils::firstidx";
"Moose::Exporter::_strip_metaclass" -> "List::MoreUtils::firstidx";
"Bio::LocatableSeq::BEGIN@105" -> "Bio::Location::Simple::BEGIN@87";
"File::Temp::BEGIN@16" -> "IO::Seekable::BEGIN@104";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@8";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@318";
"Text::CSV_PP::new" -> "Text::CSV_PP::_check_sanity";
"Moose::Meta::Role::Application::ToClass::apply_override_method_modifiers" -> "Moose::Meta::Role::get_method_modifier_list";
"Moose::Meta::Role::Application::ToClass::apply_method_modifiers" -> "Moose::Meta::Role::get_method_modifier_list";
"Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion" -> "Bio::Roary::Output::NumberOfGroups::group_statistics_obj";
"Bio::Roary::Output::NumberOfGroups::_shuffle_input_files" -> "Bio::Roary::Output::NumberOfGroups::group_statistics_obj";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_191::__ANON__[(eval 222)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_281::__ANON__[(eval 407)[Eval/Closure.pm:125]:192]";
"Module::Runtime::require_module" -> "Bio::Roary::ClustersRole::BEGIN@11";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::BEGIN@6";
"Bio::Roary::Output::NumberOfGroups::_shuffle_input_files" -> "Bio::Roary::GroupStatistics::_sorted_file_names";
"Bio::Roary::GroupStatistics::_header" -> "Bio::Roary::GroupStatistics::_sorted_file_names";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::_sorted_file_names";
"Bio::Roary::GeneNamesFromGFF::BEGIN@19" -> "Bio::Tools::GFF::BEGIN@148";
"File::Find::Rule::BEGIN@9" -> "File::Spec::Unix::curdir";
"File::Path::_rmtree" -> "File::Spec::Unix::curdir";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@40";
"Bio::SeqFeature::Generic::BEGIN@145" -> "Bio::Annotation::Collection::BEGIN@93";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::meta";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@20";
"Graph::BEGIN@32" -> "Graph::TransitiveClosure::BEGIN@10";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@19";
"Moose::Util::TypeConstraints::_create_parameterized_type_constraint" -> "Moose::Meta::TypeConstraint::Parameterizable::parameterize";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@9";
"Bio::LocatableSeq::BEGIN@105" -> "Bio::Location::Simple::BEGIN@85";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@6";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@16";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::DESTROY";
"Bio::Roary::OrderGenes::group_graphs" -> "Bio::Roary::OrderGenes::_build_group_graphs";
"Module::Runtime::require_module" -> "Moose::Meta::Object::Trait::BEGIN@4";
"Moose::Meta::TypeConstraint::Union::BEGIN@8" -> "Moose::Meta::TypeCoercion::Union::BEGIN@8";
"Moose::Util::_apply_all_roles" -> "Module::Runtime::use_module";
"base::import" -> "Bio::SeqFeatureI::BEGIN@105";
"base::import" -> "base::has_attr";
"Carp::shortmess_heavy" -> "Carp::short_error_loc";
"Class::MOP::Method::Generated::_generate_description" -> "Class::MOP::Method::Generated::definition_context";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Method::is_stub";
"Bio::SeqFeatureI::BEGIN@99" -> "Bio::DB::InMemoryCache::BEGIN@73";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_391::__ANON__[(eval 561)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_102::__ANON__[(eval 127)[Eval/Closure.pm:125]:9]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_307::__ANON__[(eval 450)[Eval/Closure.pm:125]:13]";
"parent::import" -> "Class::MOP::Method::BEGIN@9";
"Bio::Roary::Output::EmblGroups::_build_output_header_filename" -> "Bio::Roary::Output::EmblGroups::output_filename";
"Bio::Roary::Output::EmblGroups::_build__output_fh" -> "Bio::Roary::Output::EmblGroups::output_filename";
"Graph::BEGIN@29" -> "Graph::AdjacencyMap::Light::BEGIN@15";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::_block";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_13::__ANON__[(eval 37)[Eval/Closure.pm:125]:9]";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:66]";
"parent::import" -> "Class::MOP::Module::BEGIN@7";
"Moose::Meta::Class::BEGIN@14" -> "Moose::Meta::Method::Augmented::BEGIN@9";
"Moose::Meta::TypeConstraint::BEGIN@6" -> "metaclass::BEGIN@4";
"Moose::BEGIN@43" -> "Moose::Meta::Attribute::Native::BEGIN@6";
"Class::MOP::Package::_package_stash" -> "Package::Stash::XS::new";
"Package::Stash::BEGIN@17" -> "Package::Stash::XS::new";
"base::import" -> "Bio::FeatureHolderI::BEGIN@96";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@11";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_18::__ANON__[(eval 42)[Eval/Closure.pm:125]:9]";
"File::Copy::BEGIN@13" -> "File::Spec::Unix::BEGIN@4";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_split_groups_obj";
"Bio::Roary::GeneNamesFromGFF::BEGIN@19" -> "Bio::Tools::GFF::BEGIN@152";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::_groups_to_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_292::__ANON__[(eval 418)[Eval/Closure.pm:125]:26]";
"DynaLoader::bootstrap" -> "Params::Util::bootstrap";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Deprecated::BEGIN@7";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::_output_fh";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@14";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@9";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@22";
"Bio::Roary::AnnotateGroups::_build__output_fh" -> "Bio::Roary::AnnotateGroups::output_filename";
"Class::MOP::Class::remove_attribute" -> "Class::MOP::Attribute::detach_from_class";
"Moose::Meta::Class::_process_attribute" -> "Moose::Meta::Class::CORE:match";
"parent::import" -> "Class::MOP::Mixin::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_296::__ANON__[(eval 422)[Eval/Closure.pm:125]:9]";
"Bio::Root::Root::BEGIN@146" -> "AutoLoader::BEGIN@3";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@14";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@7";
"Moose::Meta::Attribute::_inline_init_from_default" -> "Moose::Meta::Mixin::AttributeCore::has_type_constraint";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::Mixin::AttributeCore::has_type_constraint";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::Mixin::AttributeCore::has_type_constraint";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Class::MOP::Mixin::HasMethods::reset_package_cache_flag";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_predicate_method";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::outfile";
"utf8::AUTOLOAD" -> "utf8::BEGIN@654";
"File::Path::BEGIN@7" -> "File::Basename::BEGIN@50";
"base::import" -> "Bio::Root::RootI::BEGIN@242";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@19";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_3::__ANON__[(eval 27)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Class::MOP::Mixin::HasMethods::_get_local_methods";
"Class::MOP::Class::get_all_methods" -> "Class::MOP::Mixin::HasMethods::_get_local_methods";
"Graph::_heap_walk" -> "Graph::set_edge_attribute";
"Graph::add_weighted_edge" -> "Graph::set_edge_attribute";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@9";
"Class::MOP::BEGIN@14" -> "Class::MOP::Mixin::AttributeCore::BEGIN@4";
"Moose::BEGIN@35" -> "Moose::Meta::Role::Application::RoleSummation::BEGIN@11";
"File::Find::Rule::BEGIN@9" -> "File::Find::BEGIN@2";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@99";
"base::import" -> "Bio::Root::Root::BEGIN@5";
"Bio::SeqIO::BEGIN@332" -> "Bio::Tools::GuessSeqFormat::BEGIN@251";
"Moose::Meta::Attribute::BEGIN@14" -> "Moose::Meta::Method::Delegation::BEGIN@12";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_217::__ANON__[(eval 318)[Eval/Closure.pm:125]:16]";
"Class::MOP::Mixin::HasOverloads::BEGIN@7" -> "Class::MOP::Overload::BEGIN@5";
"constant::import" -> "constant::CORE:regcomp";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::CORE:regcomp";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@36";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_185::__ANON__[(eval 216)[Eval/Closure.pm:125]:22]";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::CORE:qr";
"Bio::Tools::GFF::BEGIN@152" -> "Bio::SeqFeature::Generic::BEGIN@145";
"Class::MOP::Method::Generated::BEGIN@7" -> "Eval::Closure::BEGIN@5";
"Class::MOP::Instance::new" -> "Class::MOP::Instance::_new";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_101::__ANON__[(eval 126)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@14" -> "Moose::Deprecated::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_46::__ANON__[(eval 70)[Eval/Closure.pm:125]:4]";
"base::import" -> "Bio::Location::SplitLocationI::BEGIN@82";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@4";
"Bio::Roary::ClustersRole::_build__clusters_fh" -> "Bio::Roary::ClustersRole::CORE:open";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Attribute::_process_accessors";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Attribute::_process_accessors";
"Package::Stash::BEGIN@17" -> "Package::Stash::XS::get_all_symbols";
"Bio::Roary::AnnotateGroups::reannotate" -> "Bio::Roary::AnnotateGroups::_output_fh";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_152::__ANON__[(eval 178)[Eval/Closure.pm:125]:4]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@17";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_248::__ANON__[(eval 374)[Eval/Closure.pm:125]:13]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "File::Temp::Dir::DESTROY";
"Bio::Root::Root::BEGIN@3" -> "Bio::Root::IO::BEGIN@7";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::CORE:close";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@511";
"Devel::OverloadInfo::BEGIN@19" -> "Package::Stash::BEGIN@8";
"Moose::import" -> "Moose::init_meta";
"Bio::Root::Root::BEGIN@146" -> "Error::subs::BEGIN@299";
"AutoLoader::find_filename" -> "AutoLoader::CORE:subst";
"Moose::Role::init_meta" -> "Moose::Meta::Role::initialize";
"Bio::Roary::GroupLabels::add_labels" -> "Bio::Roary::GroupLabels::CORE:close";
"Module::Runtime::require_module" -> "Class::MOP::Class::Immutable::Trait::BEGIN@4";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@138";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@30";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "POSIX::BEGIN@2";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@331";
"Bio::Roary::AnnotateGroups::BEGIN@23" -> "Array::Utils::BEGIN@91";
"Class::MOP::Attribute::_inline_clear_value" -> "Class::MOP::Attribute::_inline_instance_clear";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_265::__ANON__[(eval 391)[Eval/Closure.pm:125]:123]";
"Bio::Roary::AnnotateGroups::_build__filtered_gff_files" -> "Bio::Roary::AnnotateGroups::gff_files";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@5";
"Moose::Util::TypeConstraints::create_parameterized_type_constraint" -> "Moose::Util::TypeConstraints::_parse_parameterized_type_constraint";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@327";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_231::__ANON__[(eval 348)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::TypeConstraint::_default_message";
"Moose::Meta::Class::_eval_environment" -> "Moose::Meta::TypeConstraint::_default_message";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::_default_message";
"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_337::__ANON__[(eval 480)[Eval/Closure.pm:125]:29]";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@148";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::Mixin::AttributeCore::type_constraint";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::Mixin::AttributeCore::type_constraint";
"Moose::Meta::Class::_eval_environment" -> "Moose::Meta::Mixin::AttributeCore::type_constraint";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::annotate_groups_obj";
"Bio::Roary::Output::EmblGroups::_block" -> "Bio::Roary::Output::EmblGroups::annotate_groups_obj";
"Bio::Roary::Output::EmblGroups::_build__groups_to_files" -> "Bio::Roary::Output::EmblGroups::annotate_groups_obj";
"Bio::Roary::Output::EmblGroups::_header_block" -> "Bio::Roary::Output::EmblGroups::annotate_groups_obj";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::Output::EmblGroups::annotate_groups_obj";
"Module::Runtime::module_notional_filename" -> "Module::Runtime::CORE:subst";
"Class::MOP::Module::create" -> "Class::MOP::Module::_instantiate_module";
"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@4";
"Moose::BEGIN@34" -> "Moose::Meta::Role::Application::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::meta";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_287::__ANON__[(eval 413)[Eval/Closure.pm:125]:12]";
"Class::MOP::Class::_inline_fallback_constructor" -> "Moose::Meta::Class::_generate_fallback_constructor";
"Bio::Roary::OrderGenes::_create_accessory_graph" -> "Bio::Roary::OrderGenes::_remove_weak_edges_from_graph";
"File::Path::_rmtree" -> "File::Path::CORE:open_dir";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::BEGIN@6";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_174::__ANON__[(eval 205)[Eval/Closure.pm:125]:26]";
"Bio::Root::Root::BEGIN@146" -> "Error::BEGIN@15";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_359::__ANON__[(eval 502)[Eval/Closure.pm:125]:13]";
"Class::MOP::Attribute::get_value" -> "Class::MOP::Attribute::get_raw_value";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::AnnotateGroups::DESTROY";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@23";
"Class::MOP::Method::wrap" -> "Moose::Meta::Role::Method::_new";
"Graph::AdjacencyMap::Heavy::set_path" -> "Graph::AdjacencyMap::Heavy::__set_path_node";
"Bio::Roary::SplitGroups::_closest_cgn" -> "Bio::Roary::SplitGroups::_shared_cgn_score";
"File::Temp::tempdir" -> "File::Temp::_gettemp";
"Bio::Roary::PostAnalysis::_delete_intermediate_files" -> "Bio::Roary::PostAnalysis::dont_delete_files";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::dont_delete_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_107::__ANON__[(eval 132)[Eval/Closure.pm:125]:28]";
"Exception::Class::BEGIN@9" -> "Exception::Class::Base::BEGIN@51";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_66::__ANON__[(eval 91)[Eval/Closure.pm:125]:9]";
"IO::Handle::BEGIN@266" -> "IO::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_28::__ANON__[(eval 52)[Eval/Closure.pm:125]:6]";
"File::Temp::newdir" -> "File::Temp::CORE:match";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@21";
"Class::MOP::Class::_immutable_metaclass" -> "Class::MOP::Class::immutable_trait";
"Class::MOP::Class::_immutable_options" -> "Class::MOP::Class::immutable_trait";
"Bio::Roary::GroupStatistics::_build__output_fh" -> "Bio::Roary::GroupStatistics::CORE:open";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_105::__ANON__[(eval 130)[Eval/Closure.pm:125]:9]";
"Graph::Traversal::next" -> "Graph::Traversal::_callbacks";
"Graph::Traversal::next" -> "Graph::Traversal::DFS::current";
"Graph::Traversal::new" -> "Graph::Traversal::configure";
"Moose::Meta::Role::Application::ToClass::check_role_exclusions" -> "Moose::Meta::Class::excludes_role";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@30";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@39";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::ToClass::apply_attributes";
"Bio::Roary::OrderGenes::_build_group_order" -> "Bio::Roary::OrderGenes::_groups_to_file_contigs";
"Class::MOP::Method::Generated::_compile_code" -> "Class::MOP::Method::Generated::_generate_description";
"Moose::Meta::Role::apply" -> "Moose::Meta::Role::Application::new";
"File::Temp::BEGIN@17" -> "Errno::BEGIN@9";
"Eval::Closure::BEGIN@7" -> "Sub::Exporter::BEGIN@11";
"Class::MOP::Mixin::HasOverloads::BEGIN@9" -> "Devel::OverloadInfo::BEGIN@19";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_364::__ANON__[(eval 507)[Eval/Closure.pm:125]:21]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_400::__ANON__[(eval 570)[Eval/Closure.pm:125]:12]";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Class::MOP::Object::_is_compatible_with";
"Class::MOP::Object::_can_be_made_compatible_with" -> "Class::MOP::Object::_is_compatible_with";
"Class::MOP::Class::_class_metaclass_is_compatible" -> "Class::MOP::Object::_is_compatible_with";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::InflateClusters::inflate";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@6";
"Moose::Meta::TypeConstraint::Union::BEGIN@8" -> "Moose::Meta::TypeCoercion::Union::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_225::__ANON__[(eval 342)[Eval/Closure.pm:125]:12]";
"Bio::Root::IO::BEGIN@75" -> "Fcntl::O_NOFOLLOW";
"Bio::Roary::GeneNamesFromGFF::BEGIN@19" -> "Bio::Tools::GFF::BEGIN@147";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "Class::MOP::Method::Wrapped::wrap";
"Moose::Meta::Role::BEGIN@11" -> "Class::MOP::Mixin::meta";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Mixin::meta";
"Class::MOP::Method::Meta::wrap" -> "Class::MOP::Mixin::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Mixin::meta";
"parent::import" -> "Class::MOP::Mixin::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
"base::import" -> "Bio::RangeI::BEGIN@93";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_14::__ANON__[(eval 38)[Eval/Closure.pm:125]:6]";
"Moose::Role::import" -> "Moose::Role::init_meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@8";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@7";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@14";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_246::__ANON__[(eval 372)[Eval/Closure.pm:125]:12]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_23::__ANON__[(eval 47)[Eval/Closure.pm:125]:6]";
"File::Path::_rmtree" -> "File::Path::CORE:ftdir";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@5";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::_header_bottom";
"Moose::BEGIN@12" -> "Class::Load::BEGIN@7";
"Sub::Exporter::Progressive::sub_export_options" -> "Sub::Exporter::Progressive::CORE:match";
"List::Util::first" -> "Sub::Exporter::Progressive::CORE:match";
"Moose::Meta::Role::get_method_modifier_list" -> "Moose::Meta::Role::get_before_method_modifiers_map";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_342::__ANON__[(eval 485)[Eval/Closure.pm:125]:8]";
"Moose::BEGIN@32" -> "Class::MOP::Mixin::HasMethods::add_method";
"Moose::BEGIN@43" -> "Class::MOP::Mixin::HasMethods::add_method";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Class::MOP::Mixin::HasMethods::add_method";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::Mixin::HasMethods::_add_meta_method" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::Class::_inline_constructor" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::Class::__ANON__[Class/MOP/Class.pm:1082]" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Mixin::HasMethods::add_method";
"Class::MOP::Class::_inline_destructor" -> "Class::MOP::Mixin::HasMethods::add_method";
"Moose::Exporter::_die_if_cycle_found_in_also_list_for_package" -> "Moose::Exporter::_also_list_for_package";
"Moose::Exporter::_follow_also_real" -> "Moose::Exporter::_also_list_for_package";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_383::__ANON__[(eval 526)[Eval/Closure.pm:125]:26]";
"Moose::Meta::Role::Application::apply_overloading" -> "Class::MOP::Mixin::HasOverloads::is_overloaded";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_322::__ANON__[(eval 465)[Eval/Closure.pm:125]:26]";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@5";
"Graph::AdjacencyMap::Heavy::__attr" -> "Graph::AdjacencyMap::Heavy::CORE:sort";
"Graph::AdjacencyMap::Heavy::set_path" -> "Graph::AdjacencyMap::Heavy::CORE:sort";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:170]";
"Graph::add_edge" -> "Graph::AdjacencyMap::Heavy::set_path";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_175::__ANON__[(eval 206)[Eval/Closure.pm:125]:26]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_133::__ANON__[(eval 158)[Eval/Closure.pm:125]:6]";
"Moose::Util::TypeConstraints::BEGIN@29" -> "Moose::Meta::TypeConstraint::Role::BEGIN@8";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Class::MOP::get_metaclass_by_name";
"Moose::init_meta" -> "Class::MOP::get_metaclass_by_name";
"Class::MOP::Class::_class_metaclass_is_compatible" -> "Class::MOP::get_metaclass_by_name";
"Moose::Meta::Class::initialize" -> "Class::MOP::get_metaclass_by_name";
"Class::MOP::Class::initialize" -> "Class::MOP::get_metaclass_by_name";
"Moose::Meta::Role::initialize" -> "Class::MOP::get_metaclass_by_name";
"Class::MOP::Package::initialize" -> "Class::MOP::get_metaclass_by_name";
"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::get_metaclass_by_name";
"Moose::Role::init_meta" -> "Class::MOP::get_metaclass_by_name";
"Class::MOP::Class::_inline_new_object" -> "Class::MOP::Class::_inline_generate_instance";
"Safe::CORE:regcomp" -> "utf8::SWASHNEW";
"constant::BEGIN@25" -> "utf8::SWASHNEW";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_37::__ANON__[(eval 61)[Eval/Closure.pm:125]:9]";
"Bio::Roary::PostAnalysis::_build__analyse_groups_obj" -> "Bio::Roary::AnalyseGroups::new";
"Bio::Roary::SplitGroups::_build__analyse_groups_obj" -> "Bio::Roary::AnalyseGroups::new";
"Moose::Meta::Attribute::_writer_value_needs_copy" -> "Moose::Meta::Mixin::AttributeCore::should_coerce";
"Moose::Meta::Attribute::_inline_check_coercion" -> "Moose::Meta::Mixin::AttributeCore::should_coerce";
"base::import" -> "Bio::SeqAnalysisParserI::BEGIN@92";
"Devel::StackTrace::BEGIN@10" -> "Devel::StackTrace::Frame::BEGIN@4";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@25";
"Moose::Meta::Role::Application::ToClass::apply_attributes" -> "Moose::Meta::Class::add_attribute";
"Moose::has" -> "Moose::Meta::Class::add_attribute";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@13";
"Class::MOP::Attribute::__ANON__[Class/MOP/Attribute.pm:478]" -> "Class::MOP::Mixin::HasMethods::remove_method";
"Moose::Meta::Attribute::_inline_generate_default" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Class::CORE:sort" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Class::_inline_check_required_attr" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_inline_instance_get" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::has_value" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::slots" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Class::CORE:sort" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_inline_instance_has" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_inline_instance_clear" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_set_initial_slot_value" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_accessor_description" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::_inline_instance_set" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Attribute::get_raw_value" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Role::Attribute::attribute_for_class" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Method::Accessor::_generate_reader_method_inline" -> "Class::MOP::Mixin::AttributeCore::name";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Class::_inline_slot_initializer" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Attribute::_inline_check_required" -> "Class::MOP::Mixin::AttributeCore::name";
"Moose::Meta::Attribute::_inline_weaken_value" -> "Class::MOP::Mixin::AttributeCore::name";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@16";
"Bio::Tools::CodonTable::BEGIN@191" -> "Bio::SeqUtils::BEGIN@190";
"Class::MOP::Package::initialize" -> "Class::MOP::Package::_new";
"Class::MOP::Attribute::has_value" -> "Class::MOP::Instance::is_slot_initialized";
"Moose::Meta::Attribute::remove_accessors" -> "Class::MOP::Attribute::remove_accessors";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::CORE:close";
"parent::import" -> "Class::MOP::Object::BEGIN@4";
"Class::MOP::Method::Constructor::try {...} " -> "Class::MOP::Method::Generated::_compile_code";
"Class::MOP::Method::Accessor::try {...} " -> "Class::MOP::Method::Generated::_compile_code";
"Moose::Meta::Method::Accessor::try {...} " -> "Class::MOP::Method::Generated::_compile_code";
"Moose::Meta::Method::Destructor::try {...} " -> "Class::MOP::Method::Generated::_compile_code";
"Graph::MST_Prim" -> "Graph::_heap_walk";
"Bio::Root::IO::BEGIN@75" -> "File::Spec::Unix::tmpdir";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_63::__ANON__[(eval 87)[Eval/Closure.pm:125]:4]";
"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_70::__ANON__[(eval 95)[Eval/Closure.pm:125]:9]";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_282::__ANON__[(eval 408)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Attribute::_auto_deref" -> "Moose::Meta::Mixin::AttributeCore::should_auto_deref";
"File::Copy::BEGIN@13" -> "File::Spec::BEGIN@3";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@148";
"Moose::Meta::Mixin::AttributeCore::should_auto_deref" -> "Class::MOP::Attribute::get_value";
"Moose::Meta::Mixin::AttributeCore::is_required" -> "Class::MOP::Attribute::get_value";
"Moose::Meta::Mixin::AttributeCore::should_coerce" -> "Class::MOP::Attribute::get_value";
"Moose::Meta::Mixin::AttributeCore::is_lazy" -> "Class::MOP::Attribute::get_value";
"Moose::Meta::Mixin::AttributeCore::is_weak_ref" -> "Class::MOP::Attribute::get_value";
"Moose::Meta::Role::BEGIN@12" -> "Moose::Meta::Role::Method::BEGIN@4";
"Moose::BEGIN@34" -> "Moose::Meta::Role::Application::BEGIN@5";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:readline";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Method::body";
"Moose::Meta::Role::Application::ToClass::apply_methods" -> "Class::MOP::Method::body";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Method::body";
"Class::MOP::Method::Wrapped::wrap" -> "Class::MOP::Method::body";
"Class::MOP::Mixin::HasMethods::_method_map" -> "Class::MOP::Method::body";
"Moose::Meta::Class::_inline_BUILDARGS" -> "Class::MOP::Method::body";
"File::Find::Rule::BEGIN@6" -> "Text::Glob::BEGIN@3";
"Exception::Class::Base::BEGIN@7" -> "Devel::StackTrace::BEGIN@8";
"Sub::Exporter::Progressive::sub_export_options" -> "List::Util::first";
"Data::OptList::__is_a" -> "List::Util::first";
"Sub::Exporter::Progressive::__ANON__[Sub/Exporter/Progressive.pm:40]" -> "List::Util::first";
"Bio::Roary::GroupStatistics::_groups_to_files" -> "Bio::Roary::GroupStatistics::_build__groups_to_files";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_314::__ANON__[(eval 457)[Eval/Closure.pm:125]:12]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_434::__ANON__[(eval 604)[Eval/Closure.pm:125]:304]";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@4";
"Try::Tiny::try" -> "Moose::Meta::Method::Destructor::try {...} ";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@3652";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::Output::NumberOfGroups::create_output_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@9";
"Moose::Util::TypeConstraints::BEGIN@25" -> "Moose::Meta::TypeConstraint::Union::BEGIN@5";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_81::__ANON__[(eval 106)[Eval/Closure.pm:125]:28]";
"Graph::BEGIN@86" -> "Graph::Attribute::BEGIN@24";
"Moose::BEGIN@14" -> "Moose::Deprecated::BEGIN@5";
"constant::import" -> "mro::method_changed_in";
"Moose::BEGIN@11" -> "Module::Runtime::BEGIN@116";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_318::__ANON__[(eval 461)[Eval/Closure.pm:125]:13]";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@10";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::core_definition";
"Bio::Roary::SplitGroups::_pre_filter_fasta_files" -> "File::Basename::fileparse";
"FindBin::init" -> "File::Basename::fileparse";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "File::Basename::fileparse";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@47";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@175";
"Heap071::Fibonacci::add" -> "Graph::MSTHeapElem::cmp";
"Heap071::Fibonacci::consolidate" -> "Graph::MSTHeapElem::cmp";
"Moose::Meta::Attribute::interpolate_class_and_new" -> "Moose::Meta::Attribute::interpolate_class";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:140]" -> "Sub::Exporter::default_installer";
"Sub::Exporter::_do_import" -> "Sub::Exporter::default_installer";
"Bio::SeqFeature::Generic::BEGIN@145" -> "Bio::Annotation::Collection::BEGIN@96";
"Moose::Meta::Role::Application::ToInstance::BEGIN@9" -> "Exporter::import";
"File::Path::BEGIN@6" -> "Exporter::import";
"Moose::Util::BEGIN@14" -> "Exporter::import";
"Moose::Meta::Attribute::BEGIN@9" -> "Exporter::import";
"Moose::Exporter::BEGIN@9" -> "Exporter::import";
"Class::MOP::Attribute::BEGIN@10" -> "Exporter::import";
"Moose::Util::TypeConstraints::Builtins::BEGIN@7" -> "Exporter::import";
"Moose::Meta::TypeConstraint::BEGIN@15" -> "Exporter::import";
"Class::MOP::Mixin::BEGIN@7" -> "Exporter::import";
"Moose::Meta::TypeConstraint::Class::BEGIN@8" -> "Exporter::import";
"Graph::BEGIN@28" -> "Exporter::import";
"Bio::Factory::LocationFactoryI::BEGIN@92" -> "Exporter::import";
"Class::MOP::Attribute::BEGIN@11" -> "Exporter::import";
"Moose::Exporter::BEGIN@11" -> "Exporter::import";
"Exception::Class::BEGIN@10" -> "Exporter::import";
"Moose::Meta::Role::BEGIN@8" -> "Exporter::import";
"B::Deparse::BEGIN@12" -> "Exporter::import";
"Package::DeprecationManager::BEGIN@11" -> "Exporter::import";
"Moose::Meta::Role::Composite::BEGIN@8" -> "Exporter::import";
"Class::MOP::Package::BEGIN@7" -> "Exporter::import";
"Devel::OverloadInfo::BEGIN@22" -> "Exporter::import";
"Graph::AdjacencyMap::Vertex::BEGIN@12" -> "Exporter::import";
"Devel::OverloadInfo::BEGIN@18" -> "Exporter::import";
"Class::MOP::Method::Meta::BEGIN@8" -> "Exporter::import";
"Bio::Roary::SplitGroups::BEGIN@17" -> "Exporter::import";
"Moose::Util::BEGIN@11" -> "Exporter::import";
"Moose::Meta::Attribute::BEGIN@7" -> "Exporter::import";
"Moose::Util::MetaRole::BEGIN@8" -> "Exporter::import";
"Eval::Closure::BEGIN@13" -> "Exporter::import";
"Package::DeprecationManager::BEGIN@9" -> "Exporter::import";
"Class::MOP::Method::Accessor::BEGIN@7" -> "Exporter::import";
"Moose::Util::MetaRole::BEGIN@6" -> "Exporter::import";
"Graph::BEGIN@34" -> "Exporter::import";
"Moose::BEGIN@12" -> "Exporter::import";
"B::Deparse::BEGIN@11" -> "Exporter::import";
"Bio::Roary::SplitGroups::BEGIN@15" -> "Exporter::import";
"Safe::BEGIN@29" -> "Exporter::import";
"File::Temp::BEGIN@14" -> "Exporter::import";
"File::Temp::BEGIN@11" -> "Exporter::import";
"IO::BEGIN@6" -> "Exporter::import";
"B::Deparse::BEGIN@29" -> "Exporter::import";
"Moose::Util::TypeConstraints::BEGIN@5" -> "Exporter::import";
"Try::Tiny::BEGIN@15" -> "Exporter::import";
"Moose::Meta::Method::Constructor::BEGIN@7" -> "Exporter::import";
"Storable::BEGIN@53" -> "Exporter::import";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@19" -> "Exporter::import";
"Bio::Location::SplitLocationI::BEGIN@82" -> "Exporter::import";
"Class::MOP::Overload::BEGIN@9" -> "Exporter::import";
"Moose::Util::BEGIN@9" -> "Exporter::import";
"Class::MOP::Class::BEGIN@18" -> "Exporter::import";
"Class::MOP::Method::Inlined::BEGIN@7" -> "Exporter::import";
"Bio::RangeI::BEGIN@92" -> "Exporter::import";
"Graph::BEGIN@39" -> "Exporter::import";
"Class::MOP::Mixin::HasMethods::BEGIN@9" -> "Exporter::import";
"Graph::MSTHeapElem::BEGIN@5" -> "Exporter::import";
"Class::MOP::Instance::BEGIN@7" -> "Exporter::import";
"Devel::StackTrace::BEGIN@12" -> "Exporter::import";
"Graph::AdjacencyMap::Vertex::BEGIN@15" -> "Exporter::import";
"Bio::Root::IO::BEGIN@7" -> "Exporter::import";
"Moose::Meta::Attribute::BEGIN@21" -> "Exporter::import";
"Moose::Meta::Method::Destructor::BEGIN@8" -> "Exporter::import";
"Moose::Meta::Class::Immutable::Trait::BEGIN@8" -> "Exporter::import";
"Graph::BEGIN@38" -> "Exporter::import";
"File::Temp::BEGIN@44" -> "Exporter::import";
"Graph::BEGIN@30" -> "Exporter::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@9" -> "Exporter::import";
"Class::MOP::Package::BEGIN@8" -> "Exporter::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@10" -> "Exporter::import";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@20" -> "Exporter::import";
"Moose::Meta::Class::BEGIN@9" -> "Exporter::import";
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"Opcode::BEGIN@29" -> "subs::import";
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"Class::MOP::Mixin::HasMethods::get_method" -> "Class::MOP::Mixin::HasMethods::_get_maybe_raw_method";
"Bio::SeqIO::BEGIN@330" -> "Bio::Factory::FTLocationFactory::BEGIN@102";
"Moose::Meta::Class::BEGIN@15" -> "Moose::Meta::Class::Immutable::Trait::BEGIN@10";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_211::__ANON__[(eval 312)[Eval/Closure.pm:125]:22]";
"Bio::Tools::CodonTable::BEGIN@191" -> "Bio::SeqUtils::BEGIN@189";
"parent::import" -> "Class::MOP::Method::BEGIN@5";
"base::import" -> "Bio::SeqFeatureI::BEGIN@109";
"Text::CSV::_load_pp" -> "Text::CSV_PP::BEGIN@328";
"Moose::BEGIN@38" -> "Moose::Meta::Role::Application::ToInstance::BEGIN@6";
"Bio::Root::Root::BEGIN@146" -> "Clone::BEGIN@5";
"Bio::Roary::InflateClusters::inflate" -> "Bio::Roary::InflateClusters::CORE:open";
"Bio::Roary::InflateClusters::_build__mcl_fh" -> "Bio::Roary::InflateClusters::CORE:open";
"Bio::Roary::InflateClusters::_build__output_fh" -> "Bio::Roary::InflateClusters::CORE:open";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::_error_message";
"Moose::Meta::Role::Method::Conflicting::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::Generated::BEGIN@5" -> "warnings::import";
"Moose::Exporter::import" -> "warnings::import";
"Moose::Meta::TypeConstraint::Union::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@5" -> "warnings::import";
"Moose::Meta::Method::Delegation::BEGIN@5" -> "warnings::import";
"Moose::Deprecated::BEGIN@5" -> "warnings::import";
"Bio::Roary::ClustersRole::BEGIN@2" -> "warnings::import";
"Config::BEGIN@10" -> "warnings::import";
"Bio::Tools::GuessSeqFormat::BEGIN@248" -> "warnings::import";
"mro::BEGIN@11" -> "warnings::import";
"Class::MOP::Mixin::HasAttributes::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::BEGIN@5" -> "warnings::import";
"Class::MOP::Mixin::AttributeCore::BEGIN@5" -> "warnings::import";
"Class::Load::BEGIN@6" -> "warnings::import";
"Moose::Meta::Instance::BEGIN@5" -> "warnings::import";
"Moose::Meta::Role::Application::ToClass::BEGIN@5" -> "warnings::import";
"Package::DeprecationManager::BEGIN@7" -> "warnings::import";
"Class::MOP::Mixin::HasOverloads::BEGIN@5" -> "warnings::import";
"Try::Tiny::BEGIN@10" -> "warnings::import";
"Moose::Meta::Method::Augmented::BEGIN@5" -> "warnings::import";
"Module::Implementation::BEGIN@7" -> "warnings::import";
"Eval::Closure::BEGIN@3" -> "warnings::import";
"Moose::Meta::Method::BEGIN@5" -> "warnings::import";
"Moose::import" -> "warnings::import";
"Sub::Install::BEGIN@3" -> "warnings::import";
"Moose::Meta::Method::Constructor::BEGIN@5" -> "warnings::import";
"Class::MOP::Overload::BEGIN@5" -> "warnings::import";
"Class::MOP::Object::BEGIN@5" -> "warnings::import";
"Package::Stash::XS::BEGIN@9" -> "warnings::import";
"Class::Load::BEGIN@2" -> "warnings::import";
"Class::MOP::Mixin::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::Registry::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::BEGIN@5" -> "warnings::import";
"Devel::OverloadInfo::BEGIN@15" -> "warnings::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@5" -> "warnings::import";
"Class::MOP::MiniTrait::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@5" -> "warnings::import";
"Carp::BEGIN@5" -> "warnings::import";
"Moose::Meta::Method::Accessor::BEGIN@5" -> "warnings::import";
"Moose::Util::TypeConstraints::Builtins::BEGIN@5" -> "warnings::import";
"Moose::Meta::Role::Application::ToRole::BEGIN@5" -> "warnings::import";
"Moose::Util::TypeConstraints::import" -> "warnings::import";
"Moose::Meta::TypeCoercion::Union::BEGIN@5" -> "warnings::import";
"Moose::Meta::Role::Composite::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeCoercion::BEGIN@5" -> "warnings::import";
"Sub::Exporter::Progressive::BEGIN@4" -> "warnings::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@5" -> "warnings::import";
"Class::MOP::Class::BEGIN@5" -> "warnings::import";
"Eval::Closure::BEGIN@6" -> "warnings::import";
"Package::Stash::BEGIN@9" -> "warnings::import";
"POSIX::BEGIN@3" -> "warnings::import";
"Moose::Meta::Role::Method::Required::BEGIN@5" -> "warnings::import";
"re::BEGIN@5" -> "warnings::import";
"Devel::StackTrace::Frame::BEGIN@4" -> "warnings::import";
"Moose::Meta::Role::BEGIN@5" -> "warnings::import";
"Devel::GlobalDestruction::BEGIN@4" -> "warnings::import";
"Bio::SeqUtils::BEGIN@190" -> "warnings::import";
"Class::MOP::Method::Wrapped::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@5" -> "warnings::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2" -> "warnings::import";
"Moose::Meta::TypeConstraint::Class::BEGIN@5" -> "warnings::import";
"Moose::Util::MetaRole::BEGIN@5" -> "warnings::import";
"Class::MOP::Class::Immutable::Trait::BEGIN@5" -> "warnings::import";
"Moose::Object::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::Inlined::BEGIN@5" -> "warnings::import";
"Class::Load::XS::BEGIN@7" -> "warnings::import";
"MRO::Compat::BEGIN@3" -> "warnings::import";
"Class::MOP::Mixin::HasMethods::BEGIN@5" -> "warnings::import";
"Moose::Meta::Role::Attribute::BEGIN@5" -> "warnings::import";
"Class::MOP::Deprecated::BEGIN@5" -> "warnings::import";
"Moose::Meta::Class::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::Constructor::BEGIN@5" -> "warnings::import";
"IO::BEGIN@8" -> "warnings::import";
"Class::MOP::Instance::BEGIN@5" -> "warnings::import";
"Bio::SeqIO::BEGIN@328" -> "warnings::import";
"Moose::Exporter::BEGIN@5" -> "warnings::import";
"File::Copy::BEGIN@12" -> "warnings::import";
"Moose::Meta::TypeConstraint::Enum::BEGIN@5" -> "warnings::import";
"File::Find::BEGIN@4" -> "warnings::import";
"Class::MOP::Attribute::BEGIN@5" -> "warnings::import";
"Moose::Meta::Mixin::AttributeCore::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::Accessor::BEGIN@5" -> "warnings::import";
"Moose::Meta::Method::Overridden::BEGIN@5" -> "warnings::import";
"Exception::Class::Base::BEGIN@4" -> "warnings::import";
"Moose::Meta::Role::Application::BEGIN@5" -> "warnings::import";
"Moose::Meta::Role::Method::BEGIN@5" -> "warnings::import";
"Class::MOP::Module::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeCoercion::BEGIN@2" -> "warnings::import";
"Moose::Meta::Method::Meta::BEGIN@5" -> "warnings::import";
"Class::MOP::Method::Meta::BEGIN@5" -> "warnings::import";
"Moose::Meta::Method::Destructor::BEGIN@5" -> "warnings::import";
"Sub::Name::BEGIN@45" -> "warnings::import";
"File::Basename::BEGIN@52" -> "warnings::import";
"Moose::Meta::Class::Immutable::Trait::BEGIN@5" -> "warnings::import";
"Moose::Meta::TypeConstraint::Role::BEGIN@5" -> "warnings::import";
"utf8::BEGIN@3" -> "warnings::import";
"Moose::Role::import" -> "warnings::import";
"Class::MOP::Package::BEGIN@5" -> "warnings::import";
"metaclass::BEGIN@5" -> "warnings::import";
"Devel::StackTrace::BEGIN@8" -> "warnings::import";
"Moose::Util::BEGIN@5" -> "warnings::import";
"Moose::BEGIN@2" -> "warnings::import";
"Class::MOP::BEGIN@5" -> "warnings::import";
"overloading::BEGIN@2" -> "warnings::import";
"Graph::BEGIN@42" -> "Safe::BEGIN@4";
"Class::MOP::Class::_inline_constructor" -> "Moose::Meta::Method::Constructor::new";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Moose::Meta::Class::superclasses";
"Class::MOP::Class::class_precedence_list" -> "Moose::Meta::Class::superclasses";
"Moose::init_meta" -> "Moose::Meta::Class::superclasses";
"Class::MOP::Class::_superclasses_updated" -> "Moose::Meta::Class::superclasses";
"Moose::extends" -> "Moose::Meta::Class::superclasses";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::GroupLabels::DESTROY";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_214::__ANON__[(eval 315)[Eval/Closure.pm:125]:26]";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@127";
"B::Deparse::BEGIN@3051" -> "B::opnumber";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_221::__ANON__[(eval 322)[Eval/Closure.pm:125]:162]";
"Package::DeprecationManager::BEGIN@10" -> "List::MoreUtils::BEGIN@6";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_closest_cgn";
"utf8::AUTOLOAD" -> "utf8::BEGIN@2";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_87::__ANON__[(eval 112)[Eval/Closure.pm:125]:9]";
"Sub::Exporter::default_generator" -> "Params::Util::_CODELIKE";
"Sub::Exporter::_expand_group" -> "Params::Util::_CODELIKE";
"Data::OptList::__is_a" -> "Params::Util::_CODELIKE";
"Sub::Exporter::_do_import" -> "Params::Util::_CODELIKE";
"Sub::Exporter::__ANON__[Sub/Exporter.pm:337]" -> "Sub::Exporter::_collect_collections";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@20";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_65::__ANON__[(eval 89)[Eval/Closure.pm:125]:11]";
"Safe::BEGIN@46" -> "Opcode::BEGIN@11";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_325::__ANON__[(eval 468)[Eval/Closure.pm:125]:4]";
"Exception::Class::import" -> "Exception::Class::CORE:sort";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_clearer_method";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_177::__ANON__[(eval 208)[Eval/Closure.pm:125]:26]";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::AnnotateGroups::new";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_update_genes_to_groups";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@239";
"Exception::Class::Base::BEGIN@12" -> "Class::Data::Inheritable::mk_classdata";
"Bio::Tools::IUPAC::BEGIN@170" -> "vars::import";
"Bio::LocatableSeq::BEGIN@107" -> "vars::import";
"Text::Glob::BEGIN@4" -> "vars::import";
"List::MoreUtils::BEGIN@8" -> "vars::import";
"Error::subs::BEGIN@299" -> "vars::import";
"Getopt::Long::BEGIN@46" -> "vars::import";
"Graph::BEGIN@15" -> "vars::import";
"File::Grep::BEGIN@10" -> "vars::import";
"Heap071::Fibonacci::BEGIN@4" -> "vars::import";
"Getopt::Long::BEGIN@51" -> "vars::import";
"Bio::SeqFeatureI::BEGIN@97" -> "vars::import";
"File::Find::Rule::BEGIN@195" -> "vars::import";
"Storable::BEGIN@23" -> "vars::import";
"Getopt::Long::BEGIN@19" -> "vars::import";
"Getopt::Long::BEGIN@48" -> "vars::import";
"base::BEGIN@4" -> "vars::import";
"constant::BEGIN@6" -> "vars::import";
"Getopt::Long::BEGIN@26" -> "vars::import";
"Bio::RangeI::BEGIN@94" -> "vars::import";
"Params::Util::BEGIN@65" -> "vars::import";
"Bio::Tools::GFF::BEGIN@147" -> "vars::import";
"File::Temp::BEGIN@37" -> "vars::import";
"Class::Data::Inheritable::BEGIN@4" -> "vars::import";
"Cwd::BEGIN@172" -> "vars::import";
"Heap071::Elem::BEGIN@4" -> "vars::import";
"parent::BEGIN@3" -> "vars::import";
"Graph::BEGIN@1733" -> "vars::import";
"Bio::Tools::CodonTable::BEGIN@185" -> "vars::import";
"Number::Compare::BEGIN@4" -> "vars::import";
"Bio::Root::RootI::BEGIN@84" -> "vars::import";
"Graph::MSTHeapElem::BEGIN@4" -> "vars::import";
"Text::CSV::BEGIN@6" -> "vars::import";
"Error::BEGIN@15" -> "vars::import";
"Clone::BEGIN@5" -> "vars::import";
"Graph::SPTHeapElem::BEGIN@4" -> "vars::import";
"Getopt::Long::BEGIN@22" -> "vars::import";
"File::Find::Rule::BEGIN@248" -> "vars::import";
"File::Path::BEGIN@19" -> "vars::import";
"Text::CSV_PP::BEGIN@11" -> "vars::import";
"Config::BEGIN@11" -> "vars::import";
"B::Deparse::BEGIN@25" -> "vars::import";
"Graph::AdjacencyMap::BEGIN@6" -> "vars::import";
"File::Spec::BEGIN@4" -> "vars::import";
"File::Spec::Unix::BEGIN@4" -> "vars::import";
"Bio::Factory::FTLocationFactory::BEGIN@92" -> "vars::import";
"Error::Simple::BEGIN@260" -> "vars::import";
"Getopt::Long::BEGIN@45" -> "vars::import";
"Class::MOP::Class::try {...} " -> "Class::MOP::Attribute::install_accessors";
"Moose::Meta::Attribute::install_accessors" -> "Class::MOP::Attribute::install_accessors";
"Class::MOP::Class::_inline_accessors" -> "Class::MOP::Attribute::install_accessors";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::BEGIN@8";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_tags_to_filter";
"Bio::SeqFeatureI::BEGIN@99" -> "Bio::DB::InMemoryCache::BEGIN@77";
"Moose::Meta::Attribute::BEGIN@6" -> "B::BEGIN@9";
"Moose::Util::TypeConstraints::normalize_type_constraint_name" -> "Moose::Util::TypeConstraints::CORE:subst";
"Moose::Util::TypeConstraints::create_parameterized_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::has_type_constraint";
"Moose::Util::TypeConstraints::find_type_constraint" -> "Moose::Meta::TypeConstraint::Registry::has_type_constraint";
"File::Spec::Unix::_tmpdir" -> "File::Spec::Unix::file_name_is_absolute";
"FindBin::init" -> "File::Spec::Unix::file_name_is_absolute";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_percent_overlap";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@13";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::__ANON__[Moose/Meta/TypeConstraint.pm:72]";
"Bio::Roary::SplitGroups::_set_genes_to_groups" -> "Bio::Roary::SplitGroups::_genes_to_groups";
"Bio::Roary::SplitGroups::_same_group" -> "Bio::Roary::SplitGroups::_genes_to_groups";
"Bio::Roary::SplitGroups::_update_genes_to_groups" -> "Bio::Roary::SplitGroups::_genes_to_groups";
"parent::import" -> "Moose::Meta::Mixin::AttributeCore::BEGIN@5";
"Graph::BEGIN@35" -> "Graph::SPTHeapElem::BEGIN@5";
"Graph::BEGIN@42" -> "Safe::CORE:regcomp";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_170::__ANON__[(eval 201)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_71::__ANON__[(eval 96)[Eval/Closure.pm:125]:9]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@29";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_412::__ANON__[(eval 582)[Eval/Closure.pm:125]:4]";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@12";
"Carp::shortmess_heavy" -> "Carp::ret_summary";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@20";
"Bio::SeqIO::BEGIN@331" -> "Bio::Seq::SeqBuilder::BEGIN@128";
"Bio::Root::Root::BEGIN@3" -> "Bio::Root::IO::BEGIN@8";
"Carp::trusts" -> "Carp::get_status";
"Text::CSV::AUTOLOAD" -> "Text::CSV::CORE:match";
"Graph::AdjacencyMap::_get_path_attr" -> "Graph::AdjacencyMap::__get_path_node";
"Graph::multiedged" -> "Graph::AdjacencyMap::_is_MULTI";
"File::Find::Rule::BEGIN@6" -> "Text::Glob::BEGIN@13";
"Class::MOP::Method::Accessor::_initialize_body" -> "Moose::Meta::Method::Accessor::_generate_accessor_method";
"base::import" -> "Bio::Root::RootI::BEGIN@562";
"Moose::Meta::Role::BEGIN@14" -> "Moose::Meta::Role::Method::Conflicting::BEGIN@5";
"Moose::Meta::Role::BEGIN@11" -> "Moose::Meta::Role::Attribute::BEGIN@10";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@11";
"base::import" -> "Bio::Factory::LocationFactoryI::BEGIN@94";
"Bio::Root::Root::BEGIN@3" -> "Bio::Root::IO::BEGIN@359";
"File::Temp::_gettemp" -> "File::Temp::CORE:ftdir";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Instance::is_inlinable";
"Moose::Meta::Method::Accessor::_instance_is_inlinable" -> "Class::MOP::Instance::is_inlinable";
"Module::Runtime::require_module" -> "Package::Stash::XS::BEGIN@2";
"Moose::BEGIN@9" -> "List::Util::BEGIN@30";
"Class::MOP::Class::_inline_init_attr_from_default" -> "Class::MOP::Class::_inline_default_value";
"Moose::Meta::Class::_inline_init_attr_from_default" -> "Class::MOP::Class::_inline_default_value";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_32::__ANON__[(eval 56)[Eval/Closure.pm:125]:9]";
"Graph::_MST_add" -> "Graph::get_edge_attribute";
"Text::CSV_PP::BEGIN@328" -> "bytes::import";
"Data::Dumper::BEGIN@731" -> "bytes::import";
"Graph::AdjacencyMap::Light::__attr" -> "Graph::AdjacencyMap::_new";
"Class::MOP::Class::BEGIN@10" -> "Class::MOP::Method::Constructor::BEGIN@10";
"parent::import" -> "Class::MOP::Object::BEGIN@7";
"Bio::Tools::CodonTable::BEGIN@198" -> "Bio::Tools::IUPAC::iupac_iup";
"Bio::Roary::SplitGroups::_true_orthologs" -> "Bio::Roary::SplitGroups::_find_paralogs";
"Bio::Roary::SplitGroups::_contains_paralogs" -> "Bio::Roary::SplitGroups::_find_paralogs";
"Graph::BEGIN@36" -> "Graph::Undirected::BEGIN@5";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@12";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Carp::ret_summary" -> "Carp::caller_info";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_332::__ANON__[(eval 475)[Eval/Closure.pm:125]:13]";
"Devel::StackTrace::BEGIN@10" -> "Devel::StackTrace::Frame::BEGIN@8";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_5::__ANON__[(eval 29)[Eval/Closure.pm:125]:9]";
"Moose::Meta::Attribute::_process_options" -> "Moose::Meta::Attribute::_process_required_option";
"Moose::before" -> "Moose::Util::add_method_modifier";
"Bio::Roary::SplitGroups::_analyse_groups_obj" -> "Bio::Roary::SplitGroups::_build__analyse_groups_obj";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_143::__ANON__[(eval 168)[Eval/Closure.pm:125]:6]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::args";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@65";
"Graph::BEGIN@86" -> "Graph::Attribute::BEGIN@3";
"Devel::OverloadInfo::BEGIN@18" -> "Sub::Identify::BEGIN@6";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Method::clone";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Method::clone";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_407::__ANON__[(eval 577)[Eval/Closure.pm:125]:29]";
"Class::Load::BEGIN@9" -> "Module::Implementation::BEGIN@7";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::CORE:print";
"Moose::Exporter::BEGIN@10" -> "Moose::Util::MetaRole::BEGIN@8";
"Class::MOP::Class::_inline_slot_initializer" -> "Class::MOP::Class::_inline_init_attr_from_constructor";
"Moose::Meta::Attribute::_inline_weaken_value" -> "Class::MOP::Instance::inline_weaken_slot_value";
"Bio::Roary::InflateClusters::_mcl_fh" -> "Bio::Roary::InflateClusters::_build__mcl_fh";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@32";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@15";
"File::Temp::_gettemp" -> "File::Spec::Unix::splitpath";
"File::Path::_is_subdir" -> "File::Spec::Unix::splitpath";
"Moose::BEGIN@33" -> "Moose::Meta::Role::Composite::BEGIN@4";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::BEGIN@19";
"Moose::Util::TypeConstraints::create_role_type_constraint" -> "Moose::Meta::TypeConstraint::Role::new";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@7";
"Carp::shortmess" -> "Carp::shortmess_heavy";
"Package::DeprecationManager::import" -> "Package::DeprecationManager::_build_warn";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_135::__ANON__[(eval 160)[Eval/Closure.pm:125]:9]";
"warnings::register::import" -> "warnings::register_categories";
"Bio::Roary::OrderGenes::_add_groups_to_graph" -> "Graph::add_weighted_edge";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Graph::add_weighted_edge";
"Bio::Roary::OrderGenes::_create_accessory_graph" -> "Graph::add_weighted_edge";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::BEGIN@5";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_272::__ANON__[(eval 398)[Eval/Closure.pm:125]:12]";
"Bio::Roary::Output::NumberOfGroups::new" -> "Bio::Roary::Output::NumberOfGroups::__ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:33]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_119::__ANON__[(eval 144)[Eval/Closure.pm:125]:9]";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@7";
"Moose::Util::TypeConstraints::import" -> "Moose::Exporter::_strip_traits";
"Moose::import" -> "Moose::Exporter::_strip_traits";
"Moose::Role::import" -> "Moose::Exporter::_strip_traits";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@18";
"Class::MOP::BEGIN@14" -> "Class::MOP::Mixin::AttributeCore::BEGIN@9";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@8";
"Bio::Root::Root::BEGIN@3" -> "Bio::Root::IO::BEGIN@75";
"Class::MOP::Method::wrap" -> "Moose::Meta::Method::_new";
"Moose::Meta::Class::BEGIN@15" -> "Moose::Meta::Class::Immutable::Trait::BEGIN@8";
"Class::MOP::Method::Constructor::new" -> "Class::MOP::Method::Constructor::_initialize_body";
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"Bio::Roary::AnnotateGroups::_generate_groups_to_consensus_gene_names" -> "Bio::Roary::AnnotateGroups::CORE:match";
"Bio::Roary::AnnotateGroups::_builder__groups_to_id_names" -> "Bio::Roary::AnnotateGroups::CORE:match";
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"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@202";
"File::Find::Rule::BEGIN@9" -> "File::Find::BEGIN@4";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::BEGIN@11";
"Carp::short_error_loc" -> "Carp::trusts";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_358::__ANON__[(eval 501)[Eval/Closure.pm:125]:16]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_415::__ANON__[(eval 585)[Eval/Closure.pm:125]:12]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_371::__ANON__[(eval 514)[Eval/Closure.pm:125]:13]";
"base::import" -> "Bio::Root::RootI::BEGIN@227";
"Moose::Util::TypeConstraints::BEGIN@29" -> "Moose::Meta::TypeConstraint::Role::BEGIN@5";
"Opcode::_init_optags" -> "Opcode::opset";
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"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@38";
"Moose::Util::TypeConstraints::create_class_type_constraint" -> "Moose::Meta::TypeConstraint::Class::new";
"Bio::Roary::CommandLine::Common::BEGIN@13" -> "FindBin::BEGIN@85";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_25::__ANON__[(eval 49)[Eval/Closure.pm:125]:9]";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::meta";
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"Bio::Roary::SplitGroups::_pre_filter_fasta_files" -> "Bio::Roary::SplitGroups::fasta_files";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:170]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:77]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:106]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:60]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:114]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:292]" -> "Moose::Meta::TypeConstraint::_inline_check";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Moose::Meta::TypeConstraint::_inline_check";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@96";
"Eval::Closure::BEGIN@7" -> "Sub::Exporter::BEGIN@13";
"Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string" -> "Bio::Roary::GeneNamesFromGFF::gff_file";
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"Moose::BEGIN@43" -> "Moose::BEGIN@1";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@9";
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"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@15";
"Bio::Roary::OrderGenes::_build_groups_to_contigs" -> "Bio::Roary::OrderGenes::_create_accessory_graph";
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"Moose::Meta::Class::_inline_extra_init" -> "Moose::Meta::Class::_inline_triggers";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@225";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Method::package_name";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Method::package_name";
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"Moose::Meta::Method::Destructor::_generate_DEMOLISHALL" -> "Class::MOP::Class::find_all_methods_by_name";
"Moose::Meta::Class::_inline_BUILDALL" -> "Class::MOP::Class::find_all_methods_by_name";
"Moose::Util::TypeConstraints::Builtins::define_builtins" -> "Moose::Util::TypeConstraints::Builtins::inline_as";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Bio::Roary::GeneNamesFromGFF::BEGIN@19";
"Class::MOP::Mixin::HasMethods::BEGIN@7" -> "Class::MOP::Method::Meta::BEGIN@8";
"base::import" -> "Bio::RangeI::BEGIN@96";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::TypeCoercion::meta";
"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::Class::_check_metaclass_compatibility";
"Class::MOP::Class::superclasses" -> "Class::MOP::Class::_check_metaclass_compatibility";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_373::__ANON__[(eval 516)[Eval/Closure.pm:125]:13]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_334::__ANON__[(eval 477)[Eval/Closure.pm:125]:8]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_303::__ANON__[(eval 446)[Eval/Closure.pm:125]:26]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_344::__ANON__[(eval 487)[Eval/Closure.pm:125]:22]";
"Text::CSV::AUTOLOAD" -> "Text::CSV::CORE:subst";
"parent::import" -> "Class::MOP::Package::BEGIN@171";
"Moose::Meta::TypeConstraint::can_be_inlined" -> "Moose::Meta::TypeConstraint::_has_inlined_type_constraint";
"Class::MOP::Class::BEGIN@7" -> "Class::MOP::Instance::BEGIN@4";
"Moose::Util::TypeConstraints::BEGIN@25" -> "Moose::Meta::TypeConstraint::Union::BEGIN@12";
"Moose::Meta::TypeConstraint::is_subtype_of" -> "Moose::Meta::TypeConstraint::equals";
"Moose::Meta::Role::Application::is_method_excluded" -> "Moose::Meta::Role::Application::get_method_exclusions";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@11";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@7";
"Class::MOP::Attribute::try {...} " -> "Moose::Meta::Attribute::accessor_metaclass";
"Class::MOP::Attribute::_inline_has_value" -> "Class::MOP::Attribute::_inline_instance_has";
"Moose::Meta::Attribute::_inline_check_lazy" -> "Class::MOP::Attribute::_inline_instance_has";
"Moose::Meta::Class::BEGIN@16" -> "Moose::Meta::Method::Constructor::BEGIN@7";
"Module::Implementation::BEGIN@10" -> "Try::Tiny::BEGIN@15";
"Bio::Roary::GroupStatistics::_text_csv_obj" -> "Bio::Roary::GroupStatistics::_build__text_csv_obj";
"constant::import" -> "Internals::SvREADONLY";
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"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@9";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::CORE:sort";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@330";
"Moose::Util::TypeConstraints::BEGIN@28" -> "Moose::Meta::TypeConstraint::Class::BEGIN@4";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::BEGIN@4";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::BEGIN@260";
"Moose::Meta::Role::Application::ToClass::apply_attributes" -> "Class::MOP::Mixin::HasAttributes::get_attribute_list";
"Class::MOP::Class::_inline_accessors" -> "Class::MOP::Mixin::HasAttributes::get_attribute_list";
"Moose::Util::TypeConstraints::BEGIN@30" -> "Moose::Meta::TypeConstraint::Enum::meta";
"Bio::Roary::GroupStatistics::_header" -> "Bio::Roary::GroupStatistics::CORE:subst";
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"Bio::Roary::GroupStatistics::_build__groups_to_files" -> "Bio::Roary::GroupStatistics::annotate_groups_obj";
"Bio::Roary::GroupStatistics::_non_unique_name_for_group" -> "Bio::Roary::GroupStatistics::annotate_groups_obj";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::annotate_groups_obj";
"Bio::Roary::GroupStatistics::create_spreadsheet" -> "Bio::Roary::GroupStatistics::annotate_groups_obj";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@116";
"Bio::Roary::Output::EmblGroups::_annotation_type" -> "Bio::Roary::Output::EmblGroups::CORE:match";
"Moose::Util::TypeConstraints::_create_type_constraint" -> "Moose::Util::TypeConstraints::CORE:match";
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"Moose::Util::TypeConstraints::_parse_parameterized_type_constraint" -> "Moose::Util::TypeConstraints::CORE:match";
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"Bio::Roary::Output::EmblGroups::_build__sorted_file_names" -> "Bio::Roary::Output::EmblGroups::CORE:sort";
"Bio::Roary::Output::EmblGroups::_fragment_blocks" -> "Bio::Roary::Output::EmblGroups::CORE:sort";
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"Moose::Meta::Role::Application::ToClass::_new" -> "Moose::Meta::Role::Application::__ANON__[Moose/Meta/Role/Application.pm:16]";
"Moose::Meta::Role::Attribute::attribute_for_class" -> "Moose::Meta::Role::applied_attribute_metaclass";
"AutoLoader::find_filename" -> "AutoLoader::CORE:regcomp";
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"Class::MOP::Package::has_package_symbol" -> "Package::Stash::XS::has_symbol";
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"Class::MOP::Class::_construct_class_instance" -> "Class::MOP::Class::_new";
"Try::Tiny::try" -> "Class::MOP::Method::Accessor::try {...} ";
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"File::Temp::newdir" -> "File::Temp::_parse_args";
"File::Temp::tempdir" -> "File::Temp::_parse_args";
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"Bio::Tools::CodonTable::BEGIN@191" -> "Bio::SeqUtils::BEGIN@585";
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"base::import" -> "Bio::DB::SeqI::BEGIN@79";
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"Moose::Meta::Attribute::new" -> "Class::MOP::Object::meta";
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"base::BEGIN@4" -> "vars::BEGIN@3";
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"Class::MOP::Class::add_around_method_modifier" -> "Class::MOP::Method::Wrapped::add_around_modifier";
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"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_writer_method_inline";
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"Class::MOP::Attribute::new" -> "Moose::Meta::Attribute::_new";
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"Graph::AdjacencyMap::_get_path_attr" -> "Graph::AdjacencyMap::Heavy::__attr";
"File::Temp::_gettemp" -> "File::Temp::CORE:ftis";
"base::import" -> "Bio::SeqAnalysisParserI::BEGIN@91";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Moose::Meta::Class::constructor_class";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Moose::Meta::Class::constructor_class";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Moose::Meta::Class::constructor_class";
"Class::MOP::Class::_immutable_options" -> "Moose::Meta::Class::constructor_class";
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"parent::import" -> "Class::MOP::Method::Generated::BEGIN@4";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_156::__ANON__[(eval 187)[Eval/Closure.pm:125]:12]";
"Moose::Meta::Method::Destructor::new" -> "Moose::Meta::Method::Destructor::_initialize_body";
"File::Path::rmtree" -> "File::Path::CORE:lstat";
"File::Path::_rmtree" -> "File::Path::CORE:lstat";
"Sub::Install::BEGIN@190" -> "Sub::Install::_installer";
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"Bio::Root::Root::BEGIN@146" -> "Error::BEGIN@20";
"Bio::Roary::OrderGenes::_reorder_connected_components" -> "Bio::Roary::OrderGenes::CORE:sort";
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"Moose::Meta::Attribute::_inline_generate_default" -> "Class::MOP::Mixin::AttributeCore::has_builder";
"Moose::Meta::Class::_inline_check_required_attr" -> "Class::MOP::Mixin::AttributeCore::has_builder";
"Class::MOP::Class::_inline_default_value" -> "Class::MOP::Mixin::AttributeCore::has_builder";
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"Bio::PrimarySeqI::BEGIN@124" -> "Bio::Tools::CodonTable::BEGIN@193";
"Bio::Tools::GFF::BEGIN@150" -> "Bio::Seq::SeqFactory::BEGIN@83";
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"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_118::__ANON__[(eval 143)[Eval/Closure.pm:125]:9]";
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"DynaLoader::bootstrap" -> "DynaLoader::dl_load_file";
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"Moose::BEGIN@36" -> "Moose::Meta::Role::Application::ToClass::BEGIN@5";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::InflateClusters::new";
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"Class::MOP::Class::make_immutable" -> "Class::MOP::Class::_immutable_options";
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"Module::Implementation::try {...} " -> "Module::Runtime::require_module";
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"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Mixin::AttributeCore::has_accessor";
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"Class::MOP::Class::class_precedence_list" -> "mro::get_mro";
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"Moose::BEGIN@25" -> "Moose::Meta::TypeConstraint::BEGIN@8";
"base::import" -> "base::has_fields";
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"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@116";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_delete_intermediate_files";
"File::Path::BEGIN@6" -> "Cwd::BEGIN@171";
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"Bio::Roary::GroupLabels::_build__input_fh" -> "Bio::Roary::GroupLabels::CORE:open";
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"Moose::Meta::Role::_attach_attribute" -> "Moose::Meta::Role::Attribute::attach_to_role";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@31";
"Class::MOP::Class::_inline_fallback_constructor" -> "Class::MOP::Class::_generate_fallback_constructor";
"Moose::Meta::Method::Constructor::new" -> "Moose::Meta::Method::Constructor::_initialize_body";
"Bio::Root::IO::BEGIN@75" -> "Carp::Heavy::BEGIN@3";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@84";
"Graph::add_edge" -> "Graph::multiedged";
"Graph::Traversal::configure" -> "Graph::multiedged";
"Graph::expect_non_multiedged" -> "Graph::multiedged";
"Graph::edges" -> "Graph::multiedged";
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"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@4";
"B::Deparse::BEGIN@3720" -> "B::Deparse::CORE:qr";
"Class::MOP::Package::initialize" -> "Moose::Meta::Role::_new";
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"Moose::Meta::Class::BEGIN@17" -> "Moose::Meta::Method::Destructor::BEGIN@14";
"Class::MOP::Class::BEGIN@8" -> "Class::MOP::Method::Wrapped::BEGIN@9";
"Bio::SeqFeature::Generic::BEGIN@145" -> "Bio::Annotation::Collection::BEGIN@92";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:114]";
"Moose::BEGIN@32" -> "Moose::Meta::Role::BEGIN@5";
"Class::MOP::Method::Accessor::_generate_accessor_method_inline" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_writer_method_inline" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_predicate_method" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_accessor_method" -> "Class::MOP::Method::Accessor::associated_attribute";
"Moose::Meta::Method::Accessor::_eval_environment" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_clearer_method_inline" -> "Class::MOP::Method::Accessor::associated_attribute";
"Moose::Meta::Method::Accessor::_instance_is_inlinable" -> "Class::MOP::Method::Accessor::associated_attribute";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_reader_method_inline" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_reader_method" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_writer_method" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_clearer_method" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Method::Accessor::_generate_predicate_method_inline" -> "Class::MOP::Method::Accessor::associated_attribute";
"Class::MOP::Mixin::HasMethods::has_method" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Mixin::HasMethods::_full_method_map" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Mixin::HasMethods::_get_maybe_raw_method" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Class:::around" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Mixin::HasMethods::remove_method" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Class::MOP::Mixin::HasMethods::get_method" -> "Class::MOP::Mixin::HasMethods::_method_map";
"Text::CSV::_load_xs" -> "Text::CSV::BEGIN@1";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::TypeConstraint::Parameterized::can_be_inlined";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::TypeConstraint::Parameterized::can_be_inlined";
"Moose::Meta::TypeConstraint::Parameterized::_inline_check" -> "Moose::Meta::TypeConstraint::Parameterized::can_be_inlined";
"Moose::Meta::TypeConstraint::_actually_compile_type_constraint" -> "Moose::Meta::TypeConstraint::Parameterized::can_be_inlined";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::BEGIN@9";
"Moose::BEGIN@10" -> "Carp::BEGIN@575";
"Moose::Meta::Class::_process_new_attribute" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"Class::MOP::Class::_single_metaclass_is_compatible" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"Class::MOP::Class::_single_metaclass_can_be_made_compatible" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"List::Util::all" -> "Class::MOP::Mixin::HasAttributes::attribute_metaclass";
"Moose::Meta::TypeConstraint::Parameterized::can_be_inlined" -> "Moose::Meta::TypeConstraint::Parameterized::has_parameterized_from";
"Moose::Meta::TypeConstraint::Parameterized::inline_environment" -> "Moose::Meta::TypeConstraint::Parameterized::has_parameterized_from";
"Moose::Util::TypeConstraints::BEGIN@29" -> "Moose::Meta::TypeConstraint::Role::BEGIN@10";
"Class::MOP::Method::Generated::BEGIN@7" -> "Eval::Closure::BEGIN@15";
"Moose::Meta::Class::add_role_application" -> "Moose::Meta::Class::_get_role_applications";
"Moose::Meta::Role::Application::ToClass::apply" -> "Moose::Meta::Class::add_role";
"Graph::Traversal::visit" -> "Graph::Traversal::add_order";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@5";
"Class::MOP::BEGIN@15" -> "Class::MOP::Mixin::HasAttributes::BEGIN@7";
"Bio::Roary::AnnotateGroups::BEGIN@21" -> "Bio::Roary::GeneNamesFromGFF::BEGIN@17";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@19";
"Carp::format_arg" -> "Carp::CORE:subst";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:close";
"File::Find::Rule::BEGIN@7" -> "Number::Compare::BEGIN@4";
"Moose::Meta::Attribute::BEGIN@13" -> "Moose::Meta::Method::Accessor::BEGIN@7";
"parent::import" -> "Class::MOP::Package::BEGIN@95";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_99::__ANON__[(eval 124)[Eval/Closure.pm:125]:9]";
"Sub::Exporter::_collect_collections" -> "Sub::Exporter::_mk_collection_builder";
"Class::MOP::Class::remove_attribute" -> "Class::MOP::Mixin::HasAttributes::remove_attribute";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_61::__ANON__[(eval 85)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Role::BEGIN@13" -> "Moose::Meta::Role::Method::Required::BEGIN@6";
"Graph::_edges" -> "Graph::AdjacencyMap::_ids";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_351::__ANON__[(eval 494)[Eval/Closure.pm:125]:16]";
"Moose::Meta::Attribute::_inline_generate_default" -> "Moose::Meta::Attribute::_inline_throw_exception";
"Moose::Meta::Attribute::_inline_check_constraint" -> "Moose::Meta::Attribute::_inline_throw_exception";
"Moose::Meta::Attribute::_inline_check_required" -> "Moose::Meta::Attribute::_inline_throw_exception";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_256::__ANON__[(eval 382)[Eval/Closure.pm:125]:12]";
"Eval::Closure::BEGIN@7" -> "Sub::Exporter::BEGIN@10";
"Moose::Meta::Mixin::AttributeCore::has_trigger" -> "Class::MOP::Attribute::has_value";
"Moose::Meta::Mixin::AttributeCore::has_type_constraint" -> "Class::MOP::Attribute::has_value";
"Moose::Meta::Mixin::AttributeCore::has_handles" -> "Class::MOP::Attribute::has_value";
"Class::MOP::Mixin::HasMethods::add_method" -> "Class::MOP::Mixin::HasMethods::CORE:match";
"Bio::Roary::GroupStatistics::_build__output_fh" -> "Bio::Roary::GroupStatistics::output_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@37";
"File::Temp::_replace_XX" -> "File::Temp::CORE:regcomp";
"Class::MOP::Class::_inline_destructor" -> "Moose::Meta::Method::Destructor::is_needed";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@20";
"parent::import" -> "Class::MOP::Package::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
"File::Temp::Dir::STRINGIFY" -> "File::Temp::Dir::dirname";
"Class::MOP::Method::Generated::BEGIN@9" -> "parent::import";
"Class::MOP::Method::Inlined::BEGIN@9" -> "parent::import";
"Moose::Meta::Role::Composite::BEGIN@10" -> "parent::import";
"Class::MOP::Instance::BEGIN@9" -> "parent::import";
"Class::MOP::Mixin::HasAttributes::BEGIN@9" -> "parent::import";
"Moose::Meta::Role::Method::BEGIN@7" -> "parent::import";
"Moose::Meta::Mixin::AttributeCore::BEGIN@7" -> "parent::import";
"Moose::Meta::TypeConstraint::Role::BEGIN@12" -> "parent::import";
"Moose::Meta::Role::Attribute::BEGIN@10" -> "parent::import";
"Moose::Meta::Method::Delegation::BEGIN@9" -> "parent::import";
"Class::MOP::Method::Wrapped::BEGIN@9" -> "parent::import";
"Moose::Meta::Method::BEGIN@9" -> "parent::import";
"Moose::Meta::Method::Constructor::BEGIN@9" -> "parent::import";
"Moose::Meta::Method::Meta::BEGIN@7" -> "parent::import";
"Class::MOP::Method::Accessor::BEGIN@10" -> "parent::import";
"Moose::Meta::Class::BEGIN@22" -> "parent::import";
"Moose::Meta::Method::Accessor::BEGIN@9" -> "parent::import";
"Moose::Meta::Attribute::BEGIN@19" -> "parent::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@11" -> "parent::import";
"Moose::Meta::Method::Destructor::BEGIN@11" -> "parent::import";
"Class::MOP::Package::BEGIN@12" -> "parent::import";
"Class::MOP::Method::Constructor::BEGIN@10" -> "parent::import";
"Class::MOP::Object::BEGIN@7" -> "parent::import";
"Moose::Meta::Role::Application::ToRole::BEGIN@8" -> "parent::import";
"Moose::Meta::Role::BEGIN@19" -> "parent::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@15" -> "parent::import";
"Class::MOP::Mixin::HasOverloads::BEGIN@15" -> "parent::import";
"Moose::Meta::TypeConstraint::Enum::BEGIN@11" -> "parent::import";
"Class::MOP::Class::BEGIN@20" -> "parent::import";
"Class::MOP::Attribute::BEGIN@13" -> "parent::import";
"Moose::Meta::TypeConstraint::Class::BEGIN@12" -> "parent::import";
"Moose::Meta::TypeCoercion::Union::BEGIN@10" -> "parent::import";
"Moose::Meta::Instance::BEGIN@9" -> "parent::import";
"Bio::SeqIO::BEGIN@335" -> "parent::import";
"Class::MOP::Mixin::HasMethods::BEGIN@12" -> "parent::import";
"Moose::Meta::TypeConstraint::Parameterizable::BEGIN@8" -> "parent::import";
"File::Temp::BEGIN@32" -> "parent::import";
"Moose::Meta::Role::Method::Required::BEGIN@11" -> "parent::import";
"Moose::Meta::TypeConstraint::Registry::BEGIN@10" -> "parent::import";
"Class::MOP::Method::Meta::BEGIN@12" -> "parent::import";
"Moose::Meta::TypeConstraint::Union::BEGIN@12" -> "parent::import";
"Bio::SeqUtils::BEGIN@192" -> "parent::import";
"Moose::Meta::Class::Immutable::Trait::BEGIN@10" -> "parent::import";
"Class::MOP::Method::BEGIN@9" -> "parent::import";
"Class::MOP::Overload::BEGIN@11" -> "parent::import";
"Moose::Meta::Role::Method::Conflicting::BEGIN@9" -> "parent::import";
"Moose::Meta::Method::Overridden::BEGIN@7" -> "parent::import";
"Moose::Meta::Role::Application::ToClass::BEGIN@12" -> "parent::import";
"Class::MOP::Module::BEGIN@7" -> "parent::import";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@13" -> "parent::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@13" -> "parent::import";
"Class::MOP::Mixin::AttributeCore::BEGIN@9" -> "parent::import";
"Moose::Meta::Method::Augmented::BEGIN@7" -> "parent::import";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@10";
"Bio::Roary::GroupStatistics::_header" -> "Bio::Roary::GroupStatistics::_verbose";
"Bio::Roary::GroupStatistics::_row" -> "Bio::Roary::GroupStatistics::_verbose";
"Moose::BEGIN@33" -> "Moose::Meta::Role::Composite::BEGIN@8";
"File::Path::_rmtree" -> "File::Spec::Unix::updir";
"Moose::Exporter::build_import_methods" -> "Moose::Exporter::_follow_also";
"Class::MOP::BEGIN@19" -> "Class::MOP::Attribute::BEGIN@13";
"Class::MOP::Class::_inline_init_attr_from_constructor" -> "Moose::Meta::Attribute::_inline_set_value";
"Class::MOP::Method::Accessor::try {...} " -> "Moose::Meta::Attribute::_inline_set_value";
"Moose::Meta::Class::_inline_init_attr_from_default" -> "Moose::Meta::Attribute::_inline_set_value";
"Moose::Meta::Class::_inline_init_attr_from_constructor" -> "Moose::Meta::Attribute::_inline_set_value";
"Moose::BEGIN@26" -> "Moose::Meta::TypeCoercion::BEGIN@6";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_42::__ANON__[(eval 66)[Eval/Closure.pm:125]:6]";
"Moose::BEGIN@28" -> "Moose::Meta::Instance::BEGIN@9";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@21";
"Class::MOP::Class::BEGIN@9" -> "Class::MOP::Method::Accessor::BEGIN@7";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_242::__ANON__[(eval 359)[Eval/Closure.pm:125]:4]";
"metaclass::import" -> "Module::Runtime::use_package_optimistically";
"Moose::Util::_load_user_class" -> "Module::Runtime::use_package_optimistically";
"Class::MOP::MiniTrait::apply" -> "Module::Runtime::use_package_optimistically";
"Class::MOP::Class::_inline_destructor" -> "Module::Runtime::use_package_optimistically";
"Class::MOP::Class::_inline_constructor" -> "Module::Runtime::use_package_optimistically";
"Graph::BEGIN@42" -> "Safe::BEGIN@29";
"Moose::Role::has" -> "Moose::Util::_caller_info";
"Moose::has" -> "Moose::Util::_caller_info";
"Bio::Roary::OrderGenes::_build__groups_to_file_contigs" -> "Bio::Roary::ContigsToGeneIDsFromGFF::new";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::meta";
"IO::Handle::BEGIN@266" -> "IO::BEGIN@6";
"main::NULL" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::new" -> "Eval::Closure::Sandbox_434::CORE:match";
"Graph::_connected_components_compute" -> "Graph::unique_vertices";
"base::import" -> "Bio::AnnotationI::BEGIN@120";
"Bio::Roary::OrderGenes::number_of_files" -> "Bio::Roary::OrderGenes::_build_number_of_files";
"Graph::BEGIN@35" -> "Graph::SPTHeapElem::BEGIN@3";
"utf8::SWASHNEW" -> "utf8::_loose_name";
"Moose::Meta::Role::add_attribute" -> "Moose::Meta::Role::CORE:match";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_189::__ANON__[(eval 220)[Eval/Closure.pm:125]:4]";
"Moose::BEGIN@10" -> "Carp::BEGIN@73";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_60::__ANON__[(eval 84)[Eval/Closure.pm:125]:4]";
"Moose::Util::TypeConstraints::BEGIN@26" -> "Moose::Meta::TypeConstraint::Parameterized::BEGIN@4";
"Bio::Root::IO::BEGIN@75" -> "File::Path::BEGIN@329";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_193::__ANON__[(eval 294)[Eval/Closure.pm:125]:4]";
"utf8::AUTOLOAD" -> "utf8::BEGIN@147";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_113::__ANON__[(eval 138)[Eval/Closure.pm:125]:9]";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::_total_genes";
"Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion" -> "Bio::Roary::Output::NumberOfGroups::_total_genes";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_69::__ANON__[(eval 94)[Eval/Closure.pm:125]:9]";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@21";
"POSIX::import" -> "POSIX::load_imports";
"Bio::Roary::AnalyseGroups::_builder__freq_groups_per_genome" -> "Bio::Roary::AnalyseGroups::groups_filename";
"Bio::Roary::AnalyseGroups::_builder__groups_to_genes" -> "Bio::Roary::AnalyseGroups::groups_filename";
"Bio::Roary::AnalyseGroups::_groups_to_genes" -> "Bio::Roary::AnalyseGroups::_builder__groups_to_genes";
"Moose::Meta::Role::_new" -> "Moose::Meta::Role::__ANON__[Moose/Meta/Role.pm:351]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_148::__ANON__[(eval 173)[Eval/Closure.pm:125]:4]";
"Moose::Meta::Role::BEGIN@14" -> "Moose::Meta::Role::Method::Conflicting::BEGIN@4";
"Bio::Roary::GroupStatistics::BEGIN@21" -> "Text::CSV::_load_pp";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@44";
"Moose::Meta::Attribute::_eval_environment" -> "Moose::Meta::TypeConstraint::has_message";
"Moose::Meta::Class::_eval_environment" -> "Moose::Meta::TypeConstraint::has_message";
"Moose::Meta::TypeConstraint::new" -> "Moose::Meta::TypeConstraint::has_message";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Moose::Meta::Attribute::BEGIN@15";
"Graph::successors" -> "Graph::AdjacencyMap::_successors";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:389]" -> "Sub::Name::subname";
"Class::MOP::Mixin::HasMethods::add_method" -> "Sub::Name::subname";
"Class::MOP::Class::add_around_method_modifier" -> "Sub::Name::subname";
"Class::MOP::Class::add_before_method_modifier" -> "Sub::Name::subname";
"Try::Tiny::try" -> "Sub::Name::subname";
"Moose::Exporter::build_import_methods" -> "Sub::Name::subname";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@10";
"Moose::BEGIN@32" -> "Class::MOP::MiniTrait::apply";
"Moose::BEGIN@24" -> "Class::MOP::MiniTrait::apply";
"Class::MOP::Class::_immutable_metaclass" -> "Class::MOP::MiniTrait::apply";
"Moose::BEGIN@28" -> "Class::MOP::MiniTrait::apply";
"parent::import" -> "Class::MOP::MiniTrait::apply";
"Moose::Meta::TypeCoercion::BEGIN@8" -> "Class::MOP::MiniTrait::apply";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_12::__ANON__[(eval 36)[Eval/Closure.pm:125]:6]";
"Exception::Class::Base::BEGIN@7" -> "Devel::StackTrace::BEGIN@7";
"Moose::Util::TypeConstraints::BEGIN@31" -> "Moose::Meta::TypeConstraint::DuckType::BEGIN@5";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::_single_iteration_gene_expansion";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_group_labels_obj";
"Moose::Exporter::__ANON__[Moose/Exporter.pm:140]" -> "Moose::Exporter::_flag_as_reexport";
"Class::MOP::Class::_check_metaclass_compatibility" -> "Class::MOP::Class::_check_class_metaclass_compatibility";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Mixin::AttributeCore::writer";
"Graph::new" -> "Graph::_opt_unknown";
"Bio::Roary::GeneNamesFromGFF::_build_ids_to_gene_name" -> "Bio::Roary::GeneNamesFromGFF::CORE:close";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::Builtins::BEGIN@9";
"Bio::Roary::OrderGenes::BEGIN@22" -> "Graph::BEGIN@13";
"File::Path::_rmtree" -> "File::Path::CORE:stat";
"Bio::Roary::InflateClusters::BEGIN@20" -> "Bio::Roary::Exceptions::BEGIN@11";
"Graph::TransitiveClosure::BEGIN@10" -> "Graph::TransitiveClosure::Matrix::BEGIN@6";
"Bio::Root::Root::BEGIN@146" -> "AutoLoader::BEGIN@13";
"Moose::Exporter::build_import_methods" -> "Moose::Exporter::_make_unimport_sub";
"Moose::Meta::Role::BEGIN@11" -> "Moose::Meta::Role::Attribute::BEGIN@8";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@13";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@19";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_173::__ANON__[(eval 204)[Eval/Closure.pm:125]:26]";
"Class::MOP::Class::_check_class_metaclass_compatibility" -> "Class::MOP::Class::_class_metaclass_is_compatible";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@12.1";
"base::import" -> "Bio::DB::SeqI::BEGIN@81";
"Bio::Root::IO::BEGIN@75" -> "File::Temp::BEGIN@108";
"base::import" -> "Bio::Factory::SequenceFactoryI::BEGIN@86";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_298::__ANON__[(eval 441)[Eval/Closure.pm:125]:12]";
"base::import" -> "Bio::IdentifiableI::BEGIN@93";
"Bio::Tools::CodonTable::BEGIN@191" -> "Bio::SeqUtils::BEGIN@191";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_output_mcl_filename";
"Class::MOP::Method::Accessor::_initialize_body" -> "Class::MOP::Method::Accessor::_generate_writer_method";
"Bio::Root::IO::BEGIN@5" -> "IO::Handle::BEGIN@265";
"Bio::Roary::GroupLabels::add_labels" -> "Bio::Roary::GroupLabels::CORE:print";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:119]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_227::__ANON__[(eval 344)[Eval/Closure.pm:125]:13]";
"Bio::SeqFeature::Generic::BEGIN@147" -> "Bio::Location::Split::BEGIN@101";
"Moose::BEGIN@24" -> "Moose::Meta::Class::BEGIN@4";
"Bio::Roary::ClustersRole::BEGIN@11" -> "Moose::Role::BEGIN@13";
"Moose::Util::MetaRole::BEGIN@10" -> "Moose::Util::BEGIN@13";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@14";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Moose::BEGIN@15" -> "Moose::Exporter::BEGIN@136";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@22";
"Bio::SeqUtils::valid_aa" -> "Bio::SeqUtils::CORE:sort";
"metaclass::import" -> "Class::MOP::Mixin::HasMethods::_add_meta_method";
"Class::MOP::Class::create" -> "Class::MOP::Mixin::HasMethods::_add_meta_method";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Mixin::HasMethods::_add_meta_method";
"Moose::init_meta" -> "Class::MOP::Mixin::HasMethods::_add_meta_method";
"Moose::Role::init_meta" -> "Class::MOP::Mixin::HasMethods::_add_meta_method";
"Moose::Meta::Attribute::BEGIN@14" -> "Moose::Meta::Method::Delegation::BEGIN@9";
"Bio::Roary::GroupLabels::_input_fh" -> "Bio::Roary::GroupLabels::_build__input_fh";
"Class::MOP::Class::BEGIN@8" -> "Class::MOP::Method::Wrapped::BEGIN@4";
"Try::Tiny::ScopeGuard::BEGIN@144" -> "constant::BEGIN@2";
"Moose::Meta::TypeConstraint::Parameterized::compile_type_constraint" -> "Moose::Meta::TypeConstraint::Parameterizable::generate_constraint_for";
"Class::MOP::BEGIN@14" -> "Class::MOP::Mixin::AttributeCore::BEGIN@5";
"Bio::Root::Root::BEGIN@146" -> "Error::BEGIN@16";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@21";
"Graph::add_edge" -> "Graph::_add_edge";
"Sub::Install::BEGIN@190" -> "Sub::Install::_do_with_warn";
"Moose::Util::TypeConstraints::BEGIN@25" -> "Moose::Meta::TypeConstraint::Union::BEGIN@4";
"parent::import" -> "Class::MOP::Mixin::BEGIN@4";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_406::__ANON__[(eval 576)[Eval/Closure.pm:125]:13]";
"Bio::Root::Root::BEGIN@146" -> "AutoLoader::BEGIN@4";
"utf8::AUTOLOAD" -> "utf8::BEGIN@542";
"Moose::Meta::Class::BEGIN@14" -> "Moose::Meta::Method::Augmented::BEGIN@5";
"Graph::BEGIN@38" -> "Heap071::Fibonacci::BEGIN@3";
"Bio::Roary::AnnotateGroups::BEGIN@22" -> "Data::Dumper::BEGIN@24";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::_set_genes_to_groups";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_134::__ANON__[(eval 159)[Eval/Closure.pm:125]:9]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_376::__ANON__[(eval 519)[Eval/Closure.pm:125]:26]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@1863";
"base::import" -> "Bio::RangeI::BEGIN@91";
"Data::OptList::BEGIN@11" -> "Sub::Install::BEGIN@3";
"Bio::Roary::Exceptions::BEGIN@11" -> "Exception::Class::import";
"Moose::Meta::Role::Application::is_method_aliased" -> "Moose::Meta::Role::Application::get_method_aliases";
"Moose::Meta::TypeConstraint::Parameterized::BEGIN@10" -> "Moose::Meta::TypeConstraint::Parameterizable::BEGIN@8";
"Bio::Roary::AnnotateGroups::_split_groups" -> "Bio::Roary::AnnotateGroups::_ids_to_groups";
"Graph::BEGIN@42" -> "Safe::BEGIN@188";
"Exporter::import" -> "Exporter::export";
"Bio::Root::Root::BEGIN@146" -> "Bio::Root::Exception::BEGIN@2";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_356::__ANON__[(eval 499)[Eval/Closure.pm:125]:16]";
"Graph::AdjacencyMap::Light::__attr" -> "Graph::edges";
"Bio::Roary::Output::EmblGroups::create_files" -> "Bio::Roary::Output::EmblGroups::_output_header_fh";
"Class::Load::BEGIN@9" -> "Module::Implementation::BEGIN@10";
"Class::MOP::Attribute::_inline_instance_has" -> "Class::MOP::Attribute::associated_class";
"Moose::Meta::Attribute::_eval_environment" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::_inline_instance_clear" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::_inline_instance_get" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::install_accessors" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::_accessor_description" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::try {...} " -> "Class::MOP::Attribute::associated_class";
"Moose::Meta::Method::Accessor::_instance_is_inlinable" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::_inline_instance_set" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::remove_accessors" -> "Class::MOP::Attribute::associated_class";
"Moose::Meta::Attribute::_process_accessors" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Attribute::_process_accessors" -> "Class::MOP::Attribute::associated_class";
"Class::MOP::Method::Accessor::_generate_reader_method" -> "Class::MOP::Attribute::associated_class";
"Moose::Meta::Attribute::_inline_weaken_value" -> "Class::MOP::Attribute::associated_class";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_352::__ANON__[(eval 495)[Eval/Closure.pm:125]:193]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_172::__ANON__[(eval 203)[Eval/Closure.pm:125]:15]";
"Bio::Roary::OrderGenes::BEGIN@22" -> "B::Deparse::BEGIN@24";
"DynaLoader::bootstrap" -> "DynaLoader::CORE:ftfile";
"Class::MOP::BEGIN@9" -> "MRO::Compat::BEGIN@228";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_411::__ANON__[(eval 581)[Eval/Closure.pm:125]:9]";
"Bio::Roary::ContigsToGeneIDsFromGFF::overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_136::__ANON__[(eval 161)[Eval/Closure.pm:125]:9]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_24::__ANON__[(eval 48)[Eval/Closure.pm:125]:55]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_306::__ANON__[(eval 449)[Eval/Closure.pm:125]:26]";
"Graph::AdjacencyMap::Heavy::__set_path_node" -> "Graph::AdjacencyMap::_new_node";
"Bio::Roary::Output::NumberOfGroups::BEGIN@18" -> "List::Util::import";
"Moose::Meta::Role::Attribute::BEGIN@7" -> "List::Util::import";
"Moose::Meta::Role::Application::ToInstance::BEGIN@9" -> "List::Util::import";
"Moose::Util::MetaRole::BEGIN@8" -> "List::Util::import";
"Moose::Util::BEGIN@12" -> "List::Util::import";
"Moose::Meta::Role::Application::RoleSummation::BEGIN@8" -> "List::Util::import";
"Moose::Meta::Role::Application::BEGIN@9" -> "List::Util::import";
"Class::MOP::Class::BEGIN@18" -> "List::Util::import";
"Graph::BEGIN@39" -> "List::Util::import";
"Moose::Meta::TypeConstraint::DuckType::BEGIN@10" -> "List::Util::import";
"Moose::Meta::Attribute::BEGIN@8" -> "List::Util::import";
"Moose::Meta::Class::BEGIN@9" -> "List::Util::import";
"Moose::Meta::TypeConstraint::Union::BEGIN@10" -> "List::Util::import";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_19::__ANON__[(eval 43)[Eval/Closure.pm:125]:55]";
"Carp::shortmess" -> "Carp::_cgc";
"Carp::caller_info" -> "Carp::_cgc";
"Carp::short_error_loc" -> "Carp::_cgc";
"Moose::Meta::Role::Application::apply" -> "Moose::Meta::Role::Application::apply_after_method_modifiers";
"Bio::Roary::SplitGroups::_set_genes_to_groups" -> "Bio::Roary::SplitGroups::CORE:open";
"Bio::Roary::SplitGroups::split_groups" -> "Bio::Roary::SplitGroups::CORE:open";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "Bio::Roary::SplitGroups::CORE:open";
"Class::MOP::Class::_attach_attribute" -> "Class::MOP::Attribute::attach_to_class";
"Bio::Tools::CodonTable::BEGIN@190" -> "Bio::Tools::IUPAC::BEGIN@172";
"File::Path::rmtree" -> "File::Path::_is_subdir";
"Class::MOP::BEGIN@17" -> "Class::MOP::Mixin::HasOverloads::BEGIN@50";
"Bio::Roary::GroupStatistics::BEGIN@20" -> "POSIX::BEGIN@3";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::GroupStatistics::create_spreadsheet";
"Moose::Meta::Attribute::BEGIN@16" -> "Moose::Util::TypeConstraints::BEGIN@28";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_95::__ANON__[(eval 120)[Eval/Closure.pm:125]:9]";
"Moose::BEGIN@24" -> "Class::MOP::Attribute::new";
"Moose::Exporter::BEGIN@8" -> "Class::MOP::Attribute::new";
"Class::MOP::Mixin::HasAttributes::add_attribute" -> "Class::MOP::Attribute::new";
"Moose::Meta::Attribute::new" -> "Class::MOP::Attribute::new";
"Moose::BEGIN@30" -> "Moose::Object::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@18";
"Moose::BEGIN@10" -> "Carp::BEGIN@3";
"Moose::Util::TypeConstraints::BEGIN@621" -> "re::import";
"B::Deparse::BEGIN@3721" -> "re::import";
"Graph::BEGIN@42" -> "Safe::BEGIN@46";
"Bio::Roary::SplitGroups::_pre_filter_fasta_files" -> "File::Temp::Dir::STRINGIFY";
"Bio::Roary::SplitGroups::_parse_gene_neighbourhood" -> "File::Temp::Dir::STRINGIFY";
"Class::MOP::BEGIN@16" -> "Class::MOP::Mixin::HasMethods::BEGIN@5";
"Class::MOP::Attribute::_inline_set_value" -> "Class::MOP::Attribute::_inline_instance_set";
"Moose::Meta::Attribute::_inline_init_slot" -> "Class::MOP::Attribute::_inline_instance_set";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:60]";
"Moose::Util::TypeConstraints::BEGIN@28" -> "Moose::Meta::TypeConstraint::Class::BEGIN@9";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_402::__ANON__[(eval 572)[Eval/Closure.pm:125]:16]";
"Bio::Location::WidestCoordPolicy::new" -> "Bio::Root::Root::new";
"Class::MOP::Method::clone" -> "Class::MOP::Method::_set_original_method";
"File::Temp::Dir::DESTROY" -> "File::Path::rmtree";
"Class::MOP::Class::BEGIN@10" -> "Class::MOP::Method::Constructor::BEGIN@5";
"Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@18" -> "Bio::SeqIO::BEGIN@328";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_208::__ANON__[(eval 309)[Eval/Closure.pm:125]:26]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@10";
"Class::MOP::Attribute::_inline_instance_get" -> "Class::MOP::Instance::inline_get_slot_value";
"File::Temp::BEGIN@16" -> "IO::Seekable::BEGIN@99";
"Moose::Meta::Class::BEGIN@13" -> "Moose::Meta::Method::Overridden::BEGIN@5";
"AutoLoader::find_filename" -> "AutoLoader::CORE:fteread";
"Text::CSV_PP::new" -> "Text::CSV_PP::types";
"Bio::Annotation::Collection::BEGIN@92" -> "Bio::Annotation::TypeManager::BEGIN@86";
"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23" -> "Bio::Roary::Output::GroupsMultifastaNucleotide::BEGIN@21";
"Class::MOP::MiniTrait::apply" -> "Class::MOP::Class::get_all_methods";
"Bio::Roary::GroupStatistics::_header" -> "Bio::Roary::GroupStatistics::fixed_headers";
"Bio::Roary::Output::NumberOfGroups::create_output_files" -> "Bio::Roary::Output::NumberOfGroups::number_of_iterations";
"Moose::Util::TypeConstraints::BEGIN@621" -> "re::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@11";
"Devel::GlobalDestruction::BEGIN@8" -> "Sub::Exporter::Progressive::BEGIN@23";
"Package::Stash::BEGIN@17" -> "Module::Implementation::__ANON__[Module/Implementation.pm:44]";
"Moose::BEGIN@12" -> "Module::Implementation::__ANON__[Module/Implementation.pm:44]";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Getopt::Long::GetOptionsFromArray";
"Data::OptList::BEGIN@10" -> "DynaLoader::BEGIN@22";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_340::__ANON__[(eval 483)[Eval/Closure.pm:125]:13]";
"base::import" -> "Bio::Root::Root::BEGIN@4";
"Moose::Meta::TypeConstraint::_inline_check" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:146]";
"Class::MOP::BEGIN@18" -> "Class::MOP::Class::BEGIN@11";
"Moose::Meta::Class::_inline_params" -> "Moose::Meta::Class::_inline_BUILDARGS";
"Moose::Meta::TypeConstraint::Parameterizable::generate_inline_for" -> "Moose::Util::TypeConstraints::Builtins::__ANON__[Moose/Util/TypeConstraints/Builtins.pm:292]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_57::__ANON__[(eval 81)[Eval/Closure.pm:125]:4]";
"Eval::Closure::_clean_eval_closure" -> "Eval::Closure::Sandbox_76::__ANON__[(eval 101)[Eval/Closure.pm:125]:9]";
}
