digraph {
graph [overlap=false]
subgraph cluster_Moose {
	label="Moose";
	"Moose::with";
	"Moose::import";
	"Moose::unimport";
	"Moose::has";
}
subgraph cluster_File_Copy {
	label="File::Copy";
	"File::Copy::BEGIN@10";
	"File::Copy::BEGIN@11";
	"File::Copy::BEGIN@13";
	"File::Copy::BEGIN@47";
	"File::Copy::BEGIN@12";
	"File::Copy::BEGIN@12.1";
	"File::Copy::BEGIN@14";
}
subgraph cluster_Bio_Roary_AnnotateGroups {
	label="Bio::Roary::AnnotateGroups";
	"Bio::Roary::AnnotateGroups::BEGIN@20";
	"Bio::Roary::AnnotateGroups::meta";
	"Bio::Roary::AnnotateGroups::BEGIN@22";
	"Bio::Roary::AnnotateGroups::BEGIN@23";
	"Bio::Roary::AnnotateGroups::reannotate";
	"Bio::Roary::AnnotateGroups::BEGIN@325";
	"Bio::Roary::AnnotateGroups::BEGIN@21";
	"Bio::Roary::AnnotateGroups::BEGIN@25";
	"Bio::Roary::AnnotateGroups::new";
	"Bio::Roary::AnnotateGroups::BEGIN@19";
}
subgraph cluster_Bio_Roary_GroupStatistics {
	label="Bio::Roary::GroupStatistics";
	"Bio::Roary::GroupStatistics::BEGIN@19";
	"Bio::Roary::GroupStatistics::new";
	"Bio::Roary::GroupStatistics::BEGIN@21";
	"Bio::Roary::GroupStatistics::BEGIN@24";
	"Bio::Roary::GroupStatistics::BEGIN@202";
	"Bio::Roary::GroupStatistics::BEGIN@23";
	"Bio::Roary::GroupStatistics::create_spreadsheet";
	"Bio::Roary::GroupStatistics::BEGIN@22";
	"Bio::Roary::GroupStatistics::BEGIN@20";
	"Bio::Roary::GroupStatistics::meta";
}
subgraph cluster_Bio_Roary_GroupLabels {
	label="Bio::Roary::GroupLabels";
	"Bio::Roary::GroupLabels::BEGIN@59";
	"Bio::Roary::GroupLabels::new";
	"Bio::Roary::GroupLabels::BEGIN@19";
	"Bio::Roary::GroupLabels::meta";
	"Bio::Roary::GroupLabels::add_labels";
	"Bio::Roary::GroupLabels::BEGIN@18";
}
subgraph cluster_Exporter {
	label="Exporter";
	"Exporter::import";
}
subgraph cluster_Bio_Roary_Output_NumberOfGroups {
	label="Bio::Roary::Output::NumberOfGroups";
	"Bio::Roary::Output::NumberOfGroups::create_output_files";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@20";
	"Bio::Roary::Output::NumberOfGroups::new";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@18";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@19";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@17";
	"Bio::Roary::Output::NumberOfGroups::meta";
	"Bio::Roary::Output::NumberOfGroups::BEGIN@116";
}
subgraph cluster_Bio_Roary_Output_GroupsMultifastasNucleotide {
	label="Bio::Roary::Output::GroupsMultifastasNucleotide";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::meta";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@19";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@22";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@75";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@20";
	"Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@21";
}
subgraph cluster_Bio_Roary_PostAnalysis {
	label="Bio::Roary::PostAnalysis";
	"Bio::Roary::PostAnalysis::output_statistics_filename";
	"Bio::Roary::PostAnalysis::BEGIN@14";
	"Bio::Roary::PostAnalysis::input_files";
	"Bio::Roary::PostAnalysis::_number_of_groups_obj";
	"Bio::Roary::PostAnalysis::output_multifasta_files";
	"Bio::Roary::PostAnalysis::_build__group_labels_obj";
	"Bio::Roary::PostAnalysis::_create_embl_files";
	"Bio::Roary::PostAnalysis::accessory_ordering_key";
	"Bio::Roary::PostAnalysis::BEGIN@20";
	"Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
	"Bio::Roary::PostAnalysis::BEGIN@16";
	"Bio::Roary::PostAnalysis::_annotate_groups_obj";
	"Bio::Roary::PostAnalysis::run";
	"Bio::Roary::PostAnalysis::clusters_filename";
	"Bio::Roary::PostAnalysis::BEGIN@18";
	"Bio::Roary::PostAnalysis::dont_split_groups";
	"Bio::Roary::PostAnalysis::fasta_files";
	"Bio::Roary::PostAnalysis::_input_cd_hit_groups_file";
	"Bio::Roary::PostAnalysis::_group_labels_obj";
	"Bio::Roary::PostAnalysis::BEGIN@19";
	"Bio::Roary::PostAnalysis::_analyse_groups_obj";
	"Bio::Roary::PostAnalysis::dont_create_rplots";
	"Bio::Roary::PostAnalysis::BEGIN@21";
	"Bio::Roary::PostAnalysis::accessory_tab_output_filename";
	"Bio::Roary::PostAnalysis::_output_group_labels_filename";
	"Bio::Roary::PostAnalysis::_order_genes_obj";
	"Bio::Roary::PostAnalysis::_build__split_groups_obj";
	"Bio::Roary::PostAnalysis::_build__annotate_groups_obj";
	"Bio::Roary::PostAnalysis::BEGIN@12";
	"Bio::Roary::PostAnalysis::_build__group_statistics_obj";
	"Bio::Roary::PostAnalysis::_inflate_clusters_obj";
	"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj";
	"Bio::Roary::PostAnalysis::BEGIN@22";
	"Bio::Roary::PostAnalysis::BEGIN@15";
	"Bio::Roary::PostAnalysis::verbose_stats";
	"Bio::Roary::PostAnalysis::_build__number_of_groups_obj";
	"Bio::Roary::PostAnalysis::core_accessory_tab_output_filename";
	"Bio::Roary::PostAnalysis::_group_statistics_obj";
	"Bio::Roary::PostAnalysis::BEGIN@13";
	"Bio::Roary::PostAnalysis::BEGIN@11";
	"Bio::Roary::PostAnalysis::BEGIN@17";
	"Bio::Roary::PostAnalysis::_build__analyse_groups_obj";
	"Bio::Roary::PostAnalysis::BEGIN@225";
	"Bio::Roary::PostAnalysis::_delete_intermediate_files";
	"Bio::Roary::PostAnalysis::output_filename";
	"Bio::Roary::PostAnalysis::_output_mcl_filename";
	"Bio::Roary::PostAnalysis::_build__order_genes_obj";
	"Bio::Roary::PostAnalysis::dont_delete_files";
	"Bio::Roary::PostAnalysis::core_accessory_ordering_key";
	"Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
	"Bio::Roary::PostAnalysis::_split_groups_obj";
}
subgraph cluster_Bio_Roary_AnalyseGroups {
	label="Bio::Roary::AnalyseGroups";
	"Bio::Roary::AnalyseGroups::meta";
	"Bio::Roary::AnalyseGroups::BEGIN@20";
	"Bio::Roary::AnalyseGroups::new";
	"Bio::Roary::AnalyseGroups::BEGIN@19";
	"Bio::Roary::AnalyseGroups::BEGIN@142";
}
subgraph cluster_Bio_Roary_SplitGroups {
	label="Bio::Roary::SplitGroups";
	"Bio::Roary::SplitGroups::BEGIN@13";
	"Bio::Roary::SplitGroups::BEGIN@12";
	"Bio::Roary::SplitGroups::BEGIN@318";
	"Bio::Roary::SplitGroups::BEGIN@14";
	"Bio::Roary::SplitGroups::BEGIN@11";
	"Bio::Roary::SplitGroups::meta";
	"Bio::Roary::SplitGroups::BEGIN@16";
	"Bio::Roary::SplitGroups::BEGIN@15";
	"Bio::Roary::SplitGroups::split_groups";
	"Bio::Roary::SplitGroups::BEGIN@17";
	"Bio::Roary::SplitGroups::new";
}
subgraph cluster_Bio_Roary_InflateClusters {
	label="Bio::Roary::InflateClusters";
	"Bio::Roary::InflateClusters::inflate";
	"Bio::Roary::InflateClusters::BEGIN@20";
	"Bio::Roary::InflateClusters::meta";
	"Bio::Roary::InflateClusters::new";
	"Bio::Roary::InflateClusters::BEGIN@19";
	"Bio::Roary::InflateClusters::BEGIN@106";
}
subgraph cluster_Class_MOP_Class {
	label="Class::MOP::Class";
	"Class::MOP::Class::make_immutable";
}
subgraph cluster_Bio_Roary_CommandLine_RoaryPostAnalysis {
	label="Bio::Roary::CommandLine::RoaryPostAnalysis";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::run";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13";
}
subgraph cluster_Bio_Roary_OrderGenes {
	label="Bio::Roary::OrderGenes";
	"Bio::Roary::OrderGenes::meta";
	"Bio::Roary::OrderGenes::BEGIN@19";
	"Bio::Roary::OrderGenes::groups_to_contigs";
	"Bio::Roary::OrderGenes::new";
	"Bio::Roary::OrderGenes::BEGIN@352";
	"Bio::Roary::OrderGenes::BEGIN@20";
	"Bio::Roary::OrderGenes::BEGIN@22";
	"Bio::Roary::OrderGenes::BEGIN@18";
	"Bio::Roary::OrderGenes::BEGIN@21";
}
subgraph cluster_Bio_Roary_Output_EmblGroups {
	label="Bio::Roary::Output::EmblGroups";
	"Bio::Roary::Output::EmblGroups::BEGIN@239";
	"Bio::Roary::Output::EmblGroups::meta";
	"Bio::Roary::Output::EmblGroups::BEGIN@22";
	"Bio::Roary::Output::EmblGroups::BEGIN@21";
	"Bio::Roary::Output::EmblGroups::BEGIN@19";
	"Bio::Roary::Output::EmblGroups::create_files";
	"Bio::Roary::Output::EmblGroups::new";
	"Bio::Roary::Output::EmblGroups::BEGIN@20";
	"Bio::Roary::Output::EmblGroups::DESTROY";
	"Bio::Roary::Output::EmblGroups::BEGIN@23";
}
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::Output::NumberOfGroups::create_output_files";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::create_files";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@47";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::clusters_filename";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::dont_create_rplots";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::BEGIN@18";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "Exporter::import";
"Bio::Roary::PostAnalysis::_split_groups_obj" -> "Bio::Roary::PostAnalysis::_build__split_groups_obj";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@20";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@17";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_inflate_clusters_obj";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@22";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::SplitGroups::split_groups";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::core_accessory_tab_output_filename";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::meta";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::GroupStatistics::new";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@24";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_unsplit_clusters_filename";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::GroupLabels::add_labels";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@116";
"Bio::Roary::PostAnalysis::_build__analyse_groups_obj" -> "Bio::Roary::PostAnalysis::fasta_files";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::fasta_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@12";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@20";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@22";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@15";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@13";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@225";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::meta";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::core_accessory_ordering_key";
"Bio::Roary::PostAnalysis::_group_labels_obj" -> "Bio::Roary::PostAnalysis::_build__group_labels_obj";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@16";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
"Bio::Roary::PostAnalysis::_build__group_labels_obj" -> "Bio::Roary::PostAnalysis::_output_inflate_clusters_filename";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::BEGIN@20";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::BEGIN@19";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::PostAnalysis::_output_group_labels_filename";
"Bio::Roary::PostAnalysis::_build__group_labels_obj" -> "Bio::Roary::PostAnalysis::_output_group_labels_filename";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::BEGIN@20";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::InflateClusters::new";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@13";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::OrderGenes::groups_to_contigs";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::OrderGenes::groups_to_contigs";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::OrderGenes::groups_to_contigs";
"Bio::Roary::PostAnalysis::_build__group_labels_obj" -> "Bio::Roary::GroupLabels::new";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@17";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@16";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_group_statistics_obj";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_group_statistics_obj";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@23";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::SplitGroups::new";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@17";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_delete_intermediate_files";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@318";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@75";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::meta";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::output_multifasta_files";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_create_embl_files";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::meta";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@20";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::AnnotateGroups::new";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@239";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@18";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::meta";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::DESTROY";
"Bio::Roary::PostAnalysis::_group_statistics_obj" -> "Bio::Roary::PostAnalysis::_build__group_statistics_obj";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@12";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@11";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@10";
"Bio::Roary::PostAnalysis::_number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_build__number_of_groups_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::Output::EmblGroups::new";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@19";
"Bio::Roary::PostAnalysis::_build__analyse_groups_obj" -> "Bio::Roary::PostAnalysis::output_filename";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::PostAnalysis::output_filename";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_split_groups_obj";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@22";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@20";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@22";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::BEGIN@59";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@19";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::_analyse_groups_obj";
"Bio::Roary::PostAnalysis::_inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_build__inflate_clusters_obj";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@21";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@15";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::verbose_stats";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Bio::Roary::GroupLabels::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@13";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::meta";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@22";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::meta";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@23";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@352";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@20";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@11";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@325";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@25";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::dont_split_groups";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@19";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@12";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_group_labels_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::accessory_tab_output_filename";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::meta";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::meta";
"Bio::Roary::PostAnalysis::BEGIN@225" -> "Moose::unimport";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::Output::NumberOfGroups::new";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Moose::with";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@12.1";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::BEGIN@106";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@23";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_output_mcl_filename";
"Bio::Roary::PostAnalysis::_delete_intermediate_files" -> "Bio::Roary::PostAnalysis::dont_delete_files";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::dont_delete_files";
"Bio::Roary::PostAnalysis::_order_genes_obj" -> "Bio::Roary::PostAnalysis::_build__order_genes_obj";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@18";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Bio::Roary::OrderGenes::BEGIN@21";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Bio::Roary::SplitGroups::BEGIN@14";
"Bio::Roary::PostAnalysis::_build__split_groups_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Bio::Roary::PostAnalysis::_build__annotate_groups_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::PostAnalysis::input_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@14";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@23";
"Bio::Roary::PostAnalysis::_build__order_genes_obj" -> "Bio::Roary::OrderGenes::new";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@22";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Bio::Roary::AnnotateGroups::BEGIN@21";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::run";
"Bio::Roary::PostAnalysis::BEGIN@22" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@15" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@20" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@16" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Moose::has";
"Bio::Roary::PostAnalysis::BEGIN@19" -> "Bio::Roary::Output::NumberOfGroups::BEGIN@20";
"Bio::Roary::PostAnalysis::_build__inflate_clusters_obj" -> "Bio::Roary::PostAnalysis::_input_cd_hit_groups_file";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@21";
"Bio::Roary::PostAnalysis::BEGIN@14" -> "Bio::Roary::AnalyseGroups::BEGIN@142";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::InflateClusters::inflate";
"Bio::Roary::PostAnalysis::BEGIN@11" -> "Moose::import";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@21";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@19";
"Bio::Roary::PostAnalysis::_analyse_groups_obj" -> "Bio::Roary::PostAnalysis::_build__analyse_groups_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::output_statistics_filename";
"Bio::Roary::PostAnalysis::BEGIN@21" -> "Bio::Roary::Output::EmblGroups::BEGIN@21";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_number_of_groups_obj";
"Bio::Roary::PostAnalysis::_build__analyse_groups_obj" -> "Bio::Roary::AnalyseGroups::new";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::GroupStatistics::create_spreadsheet";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::accessory_ordering_key";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::_annotate_groups_obj";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@18";
"Bio::Roary::PostAnalysis::BEGIN@12" -> "File::Copy::BEGIN@14";
"Bio::Roary::PostAnalysis::BEGIN@13" -> "Bio::Roary::InflateClusters::BEGIN@19";
"Bio::Roary::PostAnalysis::_build__number_of_groups_obj" -> "Bio::Roary::PostAnalysis::_order_genes_obj";
"Bio::Roary::PostAnalysis::_build__group_statistics_obj" -> "Bio::Roary::PostAnalysis::_order_genes_obj";
"Bio::Roary::PostAnalysis::_create_embl_files" -> "Bio::Roary::PostAnalysis::_order_genes_obj";
"Bio::Roary::PostAnalysis::_annotate_groups_obj" -> "Bio::Roary::PostAnalysis::_build__annotate_groups_obj";
"Bio::Roary::PostAnalysis::BEGIN@18" -> "Bio::Roary::Output::GroupsMultifastasNucleotide::BEGIN@20";
"Bio::Roary::PostAnalysis::BEGIN@17" -> "Bio::Roary::GroupStatistics::BEGIN@202";
"Bio::Roary::PostAnalysis::run" -> "Bio::Roary::AnnotateGroups::reannotate";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@11";
}
