digraph {
graph [overlap=false]
subgraph cluster_Bio_Roary_External_ProteinMuscleAlignmentFromNucleotides {
	label="Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@88";
	"Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@23";
}
subgraph cluster_Moose_Meta_Role_Application_ToRole {
	label="Moose::Meta::Role::Application::ToRole";
	"Moose::Meta::Role::Application::ToRole::meta";
}
subgraph cluster_Bio_Roary_Main_RoaryPostAnalysis {
	label="Bio::Roary::Main::RoaryPostAnalysis";
	"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17";
}
subgraph cluster_Moose_Meta_Role_Application_ToInstance {
	label="Moose::Meta::Role::Application::ToInstance";
	"Moose::Meta::Role::Application::ToInstance::meta";
}
subgraph cluster_Moose {
	label="Moose";
	"Moose::BEGIN@9";
	"Moose::BEGIN@26";
	"Moose::import";
	"Moose::unimport";
	"Moose::BEGIN@41";
	"Moose::BEGIN@15";
	"Moose::BEGIN@10";
	"Moose::BEGIN@12";
	"Moose::BEGIN@7";
	"Moose::BEGIN@34";
	"Moose::BEGIN@37";
	"Moose::BEGIN@36";
	"Moose::BEGIN@28";
	"Moose::has";
	"Moose::BEGIN@17";
	"Moose::BEGIN@27";
	"Moose::BEGIN@11";
	"Moose::BEGIN@32";
	"Moose::BEGIN@43";
	"Moose::with";
	"Moose::BEGIN@14";
	"Moose::BEGIN@19";
	"Moose::BEGIN@38";
	"Moose::BEGIN@24";
	"Moose::BEGIN@30";
	"Moose::BEGIN@35";
	"Moose::BEGIN@40";
	"Moose::BEGIN@33";
	"Moose::BEGIN@25";
}
subgraph cluster_Bio_Roary_AnnotateGroups {
	label="Bio::Roary::AnnotateGroups";
	"Bio::Roary::AnnotateGroups::DESTROY";
}
subgraph cluster_Bio_Roary_GroupStatistics {
	label="Bio::Roary::GroupStatistics";
	"Bio::Roary::GroupStatistics::DESTROY";
}
subgraph cluster_Bio_Roary_GroupLabels {
	label="Bio::Roary::GroupLabels";
	"Bio::Roary::GroupLabels::DESTROY";
}
subgraph cluster_File_Find_Rule {
	label="File::Find::Rule";
	"File::Find::Rule::BEGIN@9";
	"File::Find::Rule::BEGIN@511";
	"File::Find::Rule::BEGIN@6";
	"File::Find::Rule::BEGIN@225";
	"File::Find::Rule::BEGIN@195";
	"File::Find::Rule::BEGIN@248";
	"File::Find::Rule::BEGIN@5";
	"File::Find::Rule::BEGIN@18";
	"File::Find::Rule::import";
	"File::Find::Rule::BEGIN@4";
	"File::Find::Rule::BEGIN@7";
	"File::Find::Rule::BEGIN@268";
	"File::Find::Rule::BEGIN@471";
	"File::Find::Rule::BEGIN@8";
}
subgraph cluster_Moose_Meta_TypeCoercion_Union {
	label="Moose::Meta::TypeCoercion::Union";
	"Moose::Meta::TypeCoercion::Union::meta";
}
subgraph cluster_Exporter {
	label="Exporter";
	"Exporter::import";
}
subgraph cluster_Bio_Roary_Output_NumberOfGroups {
	label="Bio::Roary::Output::NumberOfGroups";
	"Bio::Roary::Output::NumberOfGroups::DESTROY";
}
subgraph cluster_Getopt_Long {
	label="Getopt::Long";
	"Getopt::Long::CORE:match";
	"Getopt::Long::BEGIN@234";
	"Getopt::Long::BEGIN@237";
	"Getopt::Long::Configure";
	"Getopt::Long::BEGIN@239";
	"Getopt::Long::BEGIN@236";
	"Getopt::Long::BEGIN@37";
	"Getopt::Long::BEGIN@25";
	"Getopt::Long::BEGIN@258";
	"Getopt::Long::BEGIN@46";
	"Getopt::Long::BEGIN@15";
	"Getopt::Long::BEGIN@51";
	"Getopt::Long::BEGIN@233";
	"Getopt::Long::BEGIN@240";
	"Getopt::Long::import";
	"Getopt::Long::BEGIN@22";
	"Getopt::Long::BEGIN@247";
	"Getopt::Long::GetOptionsFromArray";
	"Getopt::Long::BEGIN@229";
	"Getopt::Long::BEGIN@231";
	"Getopt::Long::ConfigDefaults";
	"Getopt::Long::BEGIN@19";
	"Getopt::Long::BEGIN@48";
	"Getopt::Long::BEGIN@17";
	"Getopt::Long::BEGIN@248";
	"Getopt::Long::BEGIN@219";
	"Getopt::Long::BEGIN@45";
	"Getopt::Long::BEGIN@26";
	"Getopt::Long::BEGIN@235";
}
subgraph cluster_Bio_Roary_PostAnalysis {
	label="Bio::Roary::PostAnalysis";
	"Bio::Roary::PostAnalysis::BEGIN@22";
	"Bio::Roary::PostAnalysis::BEGIN@14";
	"Bio::Roary::PostAnalysis::meta";
	"Bio::Roary::PostAnalysis::DESTROY";
	"Bio::Roary::PostAnalysis::BEGIN@15";
	"Bio::Roary::PostAnalysis::BEGIN@20";
	"Bio::Roary::PostAnalysis::BEGIN@16";
	"Bio::Roary::PostAnalysis::run";
	"Bio::Roary::PostAnalysis::BEGIN@18";
	"Bio::Roary::PostAnalysis::BEGIN@13";
	"Bio::Roary::PostAnalysis::BEGIN@17";
	"Bio::Roary::PostAnalysis::BEGIN@11";
	"Bio::Roary::PostAnalysis::BEGIN@225";
	"Bio::Roary::PostAnalysis::BEGIN@19";
	"Bio::Roary::PostAnalysis::BEGIN@21";
	"Bio::Roary::PostAnalysis::BEGIN@12";
	"Bio::Roary::PostAnalysis::new";
}
subgraph cluster_Bio_Roary_AnalyseGroups {
	label="Bio::Roary::AnalyseGroups";
	"Bio::Roary::AnalyseGroups::DESTROY";
}
subgraph cluster_Moose_Meta_Role_Method_Required {
	label="Moose::Meta::Role::Method::Required";
	"Moose::Meta::Role::Method::Required::meta";
}
subgraph cluster_Moose_Meta_Role_Composite {
	label="Moose::Meta::Role::Composite";
	"Moose::Meta::Role::Composite::meta";
}
subgraph cluster_Moose_Exporter {
	label="Moose::Exporter";
	"Moose::Exporter::setup_import_methods";
}
subgraph cluster_Moose_Meta_Role {
	label="Moose::Meta::Role";
	"Moose::Meta::Role::meta";
}
subgraph cluster_Text_CSV {
	label="Text::CSV";
	"Text::CSV::AUTOLOAD";
}
subgraph cluster_Moose_Meta_Role_Application_RoleSummation {
	label="Moose::Meta::Role::Application::RoleSummation";
	"Moose::Meta::Role::Application::RoleSummation::meta";
}
subgraph cluster_Getopt_Long_CallBack {
	label="Getopt::Long::CallBack";
	"Getopt::Long::CallBack::BEGIN@1544";
}
subgraph cluster_Bio_Roary_SplitGroups {
	label="Bio::Roary::SplitGroups";
	"Bio::Roary::SplitGroups::DESTROY";
}
subgraph cluster_File_Temp_Dir {
	label="File::Temp::Dir";
	"File::Temp::Dir::DESTROY";
}
subgraph cluster_Bio_Roary_InflateClusters {
	label="Bio::Roary::InflateClusters";
	"Bio::Roary::InflateClusters::DESTROY";
}
subgraph cluster_Class_MOP_Mixin {
	label="Class::MOP::Mixin";
	"Class::MOP::Mixin::meta";
}
subgraph cluster_Class_MOP_Object {
	label="Class::MOP::Object";
	"Class::MOP::Object::meta";
}
subgraph cluster_Class_MOP_Class {
	label="Class::MOP::Class";
	"Class::MOP::Class::is_mutable";
	"Class::MOP::Class::make_immutable";
}
subgraph cluster_Bio_Roary_CommandLine_RoaryPostAnalysis {
	label="Bio::Roary::CommandLine::RoaryPostAnalysis";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_create_rplots";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:readline";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::cpus";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::core_definition";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@16";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::job_runner";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::translation_table";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::new";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_delete_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::args";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::group_limit";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@1";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::verbose_stats";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::run";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::_error_message";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::help";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:open";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_multifasta_files";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::output_pan_geneome_filename";
	"Bio::Roary::CommandLine::RoaryPostAnalysis::dont_split_groups";
}
subgraph cluster_Bio_Roary_OrderGenes {
	label="Bio::Roary::OrderGenes";
	"Bio::Roary::OrderGenes::DESTROY";
}
subgraph cluster_main {
	label="main";
	"main::RUNTIME";
}
subgraph cluster_Moose_Meta_TypeCoercion {
	label="Moose::Meta::TypeCoercion";
	"Moose::Meta::TypeCoercion::meta";
}
subgraph cluster_Moose_Meta_Role_Application {
	label="Moose::Meta::Role::Application";
	"Moose::Meta::Role::Application::meta";
}
subgraph cluster_Moose_Meta_Role_Application_ToClass {
	label="Moose::Meta::Role::Application::ToClass";
	"Moose::Meta::Role::Application::ToClass::meta";
}
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@9";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::cpus";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::fasta_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::core_definition";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::CallBack::BEGIN@1544";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@11";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@225";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@195";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@16" -> "Exporter::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::translation_table";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::new";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::TypeCoercion::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Class::is_mutable";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::SplitGroups::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@15";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@240";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@35";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::RoleSummation::meta";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::AnalyseGroups::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@40";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@22";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::verbose_stats";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Object::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@15";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToRole::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@17";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@225";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::help";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@5";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@229";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@471";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@219";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@25";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@6";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_create_rplots";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_create_rplots";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@88";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@34";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@16";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Exporter::setup_import_methods";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@51";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::job_runner";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@268";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@1";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@237";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@15";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@7";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@37";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@36";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@17";
"main::RUNTIME" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::run";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::_error_message";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::GroupLabels::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@26";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_statistics_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:readline";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::CORE:match";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@41";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@22";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::InflateClusters::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToInstance::meta";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@239";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Text::CSV::AUTOLOAD";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@37";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::input_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@19";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@247";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::BEGIN@23";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::args";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@26";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@9";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@236";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@258";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@28";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@13";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@14";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::CORE:open";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@231";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_pan_geneome_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_pan_geneome_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@17";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Method::Required::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@33";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@235";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "File::Temp::Dir::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@511";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::Output::NumberOfGroups::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@20";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@27";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@48";
"Bio::Roary::CommandLine::RoaryPostAnalysis::new" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::group_limit";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::group_limit";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@188" -> "Moose::unimport";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@7";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Moose::with";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@19";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@248";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::output_multifasta_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::AnnotateGroups::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_split_groups";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@14";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::GroupStatistics::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Class::MOP::Class::make_immutable";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::PostAnalysis::run";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@46";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Moose::has";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Moose::has";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@43";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@32";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::TypeCoercion::Union::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@21";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@15" -> "Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Application::ToClass::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@19";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@4";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::Configure";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Class::MOP::Mixin::meta";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::clusters_filename";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::import";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@25";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@8";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@233";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::OrderGenes::DESTROY";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::ConfigDefaults";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@45";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@234";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@14" -> "File::Find::Rule::BEGIN@18";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::Meta::Role::Composite::meta";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@18";
"Bio::Roary::Main::RoaryPostAnalysis::BEGIN@17" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@16";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@2";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_delete_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::dont_delete_files";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@12" -> "Getopt::Long::BEGIN@248";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@10";
"Bio::Roary::CommandLine::RoaryPostAnalysis::run" -> "Bio::Roary::CommandLine::RoaryPostAnalysis::_read_file_into_array";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@13" -> "Bio::Roary::PostAnalysis::BEGIN@11";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BUILD" -> "Getopt::Long::GetOptionsFromArray";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@38";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@30";
"Bio::Roary::CommandLine::RoaryPostAnalysis::BEGIN@11" -> "Moose::BEGIN@24";
}
