digraph {
graph [overlap=false]
subgraph cluster_Moose {
	label="Moose";
	"Moose::import";
	"Moose::unimport";
}
subgraph cluster_Bio_Roary_ParseGFFAnnotationRole {
	label="Bio::Roary::ParseGFFAnnotationRole";
	"Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string";
}
subgraph cluster_Bio_Roary_ContigsToGeneIDsFromGFF {
	label="Bio::Roary::ContigsToGeneIDsFromGFF";
	"Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::new";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_awk_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:close";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:readline";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_min_nucleotide_overlap_percentage";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_tags_to_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::overlapping_hypothetical_protein_ids";
	"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@18";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_percent_overlap";
	"Bio::Roary::ContigsToGeneIDsFromGFF::__ANON__[lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm:24]";
	"Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
	"Bio::Roary::ContigsToGeneIDsFromGFF::CORE:open";
}
subgraph cluster_Bio_Roary_OrderGenes {
	label="Bio::Roary::OrderGenes";
	"Bio::Roary::OrderGenes::BEGIN@21";
}
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17";
"Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_min_nucleotide_overlap_percentage";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_tags_to_filter";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_percent_overlap";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:close";
"Bio::Roary::ContigsToGeneIDsFromGFF::_awk_filter" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_build__awk_filter";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::contig_to_ids";
"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@142" -> "Moose::unimport";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ParseGFFAnnotationRole::_gff_fh_input_string";
"Bio::Roary::ContigsToGeneIDsFromGFF::new" -> "Bio::Roary::ContigsToGeneIDsFromGFF::__ANON__[lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm:24]";
"Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@17" -> "Moose::import";
"Bio::Roary::ContigsToGeneIDsFromGFF::overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids";
"Bio::Roary::OrderGenes::BEGIN@21" -> "Bio::Roary::ContigsToGeneIDsFromGFF::BEGIN@18";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::_genes_annotation";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:open";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_overlapping_hypothetical_protein_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:match";
"Bio::Roary::ContigsToGeneIDsFromGFF::_build_contig_to_ids" -> "Bio::Roary::ContigsToGeneIDsFromGFF::CORE:readline";
}
