

# Proch::N50

[![Ubuntu](https://github.com/telatin/proch-n50/actions/workflows/ubuntu.yaml/badge.svg)](https://github.com/telatin/proch-n50/actions/workflows/ubuntu.yaml)
[![Windows](https://github.com/telatin/proch-n50/actions/workflows/windows.yml/badge.svg)](https://github.com/telatin/proch-n50/actions/workflows/windows.yml)

a small module to calculate N50 (total size, and total number of sequences) for a FASTA or FASTQ file. It's easy to install, with minimal dependencies.

 * Distribution page in **[MetaCPAN](https://metacpan.org/pod/Proch::N50)**

## Documentation pages

### Binaries 
 * [n50](docs/n50.md)
 * [fu-uniq](docs/fu-uniq.md)
 * [fu-sort](docs/fu-sort.md)
 * [fu-rename](docs/fu-rename.md)
 * [fu-len](docs/fu-len.md)
 * [fu-hash](docs/fu-hash.md)
 * [fu-grep](docs/fu-grep.md)
 * [fu-extract](docs/fu-extract.md)
 * [fu-count](docs/fu-count.md)
 * [fu-compare](docs/fu-compare.md)
 * [fu-cat](docs/fu-cat.md)
### Modules 
 * [Proch::N50](docs/N50.md)
 * [Proch::Seqfu](docs/Seqfu.md)


# Citing

Telatin A, Fariselli P, Birolo G. 
**SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files**.
Bioengineering 2021, 8, 59. [10.3390/bioengineering8050059](https://doi.org/10.3390/bioengineering8050059)


Last updated: 2022-07-05
